RNA–Protein interactions for RNA: ENST00000311371.9

SOX30-202, Transcript of SRY-box 30, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX30, Length 2,716 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX30-202ENST00000311371 S4R3C0 116 aa12.51□□□□□ -0.41
SOX30-202ENST00000311371 IGHV3-30P01768 117 aa12.51□□□□□ -0.41
SOX30-202ENST00000311371 IGHV3-30-5P0DP03 117 aa12.51□□□□□ -0.41
SOX30-202ENST00000311371 Q1RN00 199 aa12.51□□□□□ -0.41
SOX30-202ENST00000311371 MRGPRG-AS1Q2M3A8 158 aa12.51□□□□□ -0.41
SOX30-202ENST00000311371 FAM19A5Q7Z5A7 132 aaPredicted RBP12.51□□□□□ -0.41
SOX30-202ENST00000311371 H3BMM0 161 aa12.5□□□□□ -0.41
SOX30-202ENST00000311371 CD40P25942 277 aa12.5□□□□□ -0.41
SOX30-202ENST00000311371 CNTFRP26992 372 aa12.5□□□□□ -0.41
SOX30-202ENST00000311371 CNEP1R1Q8N9A8 125 aa12.5□□□□□ -0.41
SOX30-202ENST00000311371 UBE2WQ96B02 151 aa12.5□□□□□ -0.41
SOX30-202ENST00000311371 GAFA1Q96PS6 74 aa12.5□□□□□ -0.41
SOX30-202ENST00000311371 LINC01620Q4KN68 170 aa12.5□□□□□ -0.41
SOX30-202ENST00000311371 TIMD4Q96H15 378 aa12.5□□□□□ -0.41
SOX30-202ENST00000311371 FAM236AA0A1B0GUQ0 79 aa12.49□□□□□ -0.41
SOX30-202ENST00000311371 FAM236BA0A1B0GV22 79 aa12.49□□□□□ -0.41
SOX30-202ENST00000311371 LGALS9O00182 355 aa12.49□□□□□ -0.41
SOX30-202ENST00000311371 IGKV3-15P01624 115 aa12.49□□□□□ -0.41
SOX30-202ENST00000311371 A0A1W2PNU3 283 aaPredicted RBP12.49□□□□□ -0.41
SOX30-202ENST00000311371 NPFFO15130 113 aa12.49□□□□□ -0.41
SOX30-202ENST00000311371 CNFNQ9BYD5 112 aa12.49□□□□□ -0.41
SOX30-202ENST00000311371 LHBP01229 141 aa12.48□□□□□ -0.41
SOX30-202ENST00000311371 BAALCQ8WXS3 180 aa12.48□□□□□ -0.41
SOX30-202ENST00000311371 RNF125Q96EQ8 232 aa12.48□□□□□ -0.41
SOX30-202ENST00000311371 DUX3Q96PT4 197 aa12.48□□□□□ -0.41
SOX30-202ENST00000311371 IGF2-ASQ6U949 168 aa12.48□□□□□ -0.41
SOX30-202ENST00000311371 PLCE1Q9P212 2302 aa12.48□□□□□ -0.41
SOX30-202ENST00000311371 A4D1N5 150 aa12.47□□□□□ -0.41
SOX30-202ENST00000311371 HERVK_113P63121 156 aa12.47□□□□□ -0.41
SOX30-202ENST00000311371 ATXN8Q156A1 80 aa12.47□□□□□ -0.41
SOX30-202ENST00000311371 ZNF491Q8N8L2 437 aa12.47□□□□□ -0.41
SOX30-202ENST00000311371 NDUFA7O95182 113 aa12.47□□□□□ -0.41
SOX30-202ENST00000311371 IL17RELQ6ZVW7 336 aa12.47□□□□□ -0.41
SOX30-202ENST00000311371 TRGV11A0A075B6L2 103 aa12.46□□□□□ -0.41
SOX30-202ENST00000311371 WT1P19544 449 aaPredicted RBP12.46□□□□□ -0.41
SOX30-202ENST00000311371 HERVK_113P61574 105 aa12.46□□□□□ -0.41
SOX30-202ENST00000311371 ERCC8Q13216 396 aa12.46□□□□□ -0.41
SOX30-202ENST00000311371 PVRIGQ6DKI7 326 aa12.46□□□□□ -0.41
SOX30-202ENST00000311371 EDA2RQ9HAV5 297 aa12.46□□□□□ -0.41
SOX30-202ENST00000311371 TRAV25A0A0B4J276 109 aa12.46□□□□□ -0.41
SOX30-202ENST00000311371 IGHV3-33P01772 117 aa12.46□□□□□ -0.41
SOX30-202ENST00000311371 RPL13AP40429 203 aaKnown RBP12.46□□□□□ -0.41
SOX30-202ENST00000311371 CEMP1Q6PRD7 247 aaPredicted RBP12.46□□□□□ -0.41
SOX30-202ENST00000311371 ZNF474Q6S9Z5 364 aaPredicted RBP12.46□□□□□ -0.41
SOX30-202ENST00000311371 SPTBN2O15020 2390 aa12.46□□□□□ -0.42
SOX30-202ENST00000311371 I3L2K1 104 aa12.46□□□□□ -0.42
SOX30-202ENST00000311371 TM4SF5O14894 197 aa12.46□□□□□ -0.42
SOX30-202ENST00000311371 EIF4EBP3O60516 100 aaPredicted RBP12.46□□□□□ -0.42
SOX30-202ENST00000311371 C2orf82Q6UX34 121 aa12.46□□□□□ -0.42
SOX30-202ENST00000311371 CFHR4Q92496 578 aa12.46□□□□□ -0.42
SOX30-202ENST00000311371 SMIM2Q9BVW6 85 aa12.46□□□□□ -0.42
SOX30-202ENST00000311371 SPRR3Q9UBC9 169 aa12.46□□□□□ -0.42
SOX30-202ENST00000311371 RAI1Q7Z5J4 1906 aaPredicted RBP12.45□□□□□ -0.42
SOX30-202ENST00000311371 AKAP13Q12802 2813 aa12.45□□□□□ -0.42
SOX30-202ENST00000311371 DEFB104AQ8WTQ1 72 aa12.45□□□□□ -0.42
SOX30-202ENST00000311371 TOMM6Q96B49 74 aa12.45□□□□□ -0.42
SOX30-202ENST00000311371 LINC00574Q9H8X3 128 aa12.45□□□□□ -0.42
SOX30-202ENST00000311371 IGHV1-18A0A0C4DH31 117 aa12.45□□□□□ -0.42
SOX30-202ENST00000311371 TSPEAR-AS2P59090 65 aa12.45□□□□□ -0.42
SOX30-202ENST00000311371 PMVKQ15126 192 aa12.45□□□□□ -0.42
SOX30-202ENST00000311371 RNF7Q9UBF6 113 aa12.45□□□□□ -0.42
SOX30-202ENST00000311371 C11orf86A6NJI1 115 aa12.44□□□□□ -0.42
SOX30-202ENST00000311371 J3KT08 172 aa12.44□□□□□ -0.42
SOX30-202ENST00000311371 C14orf178Q8N769 122 aaPredicted RBP12.44□□□□□ -0.42
SOX30-202ENST00000311371 SLC25A29Q8N8R3 303 aa12.44□□□□□ -0.42
SOX30-202ENST00000311371 RBAKDNA6NC62 111 aa12.44□□□□□ -0.42
SOX30-202ENST00000311371 C2orf66Q6UXQ4 117 aa12.44□□□□□ -0.42
SOX30-202ENST00000311371 Q6ZT83 130 aa12.44□□□□□ -0.42
SOX30-202ENST00000311371 ZFHX4Q86UP3 3567 aa12.43□□□□□ -0.42
SOX30-202ENST00000311371 TRBV10-2A0A0K0K1G8 114 aa12.43□□□□□ -0.42
SOX30-202ENST00000311371 M0R2P5 195 aa12.43□□□□□ -0.42
SOX30-202ENST00000311371 COX8CQ7Z4L0 72 aa12.43□□□□□ -0.42
SOX30-202ENST00000311371 CD3EP07766 207 aa12.43□□□□□ -0.42
SOX30-202ENST00000311371 PDE6HQ13956 83 aa12.43□□□□□ -0.42
SOX30-202ENST00000311371 ORMDL2Q53FV1 153 aa12.43□□□□□ -0.42
SOX30-202ENST00000311371 C3orf22Q8N5N4 141 aa12.43□□□□□ -0.42
SOX30-202ENST00000311371 ZNF22P17026 224 aaPredicted RBP12.42□□□□□ -0.42
SOX30-202ENST00000311371 SPANXN1Q5VSR9 72 aa12.42□□□□□ -0.42
SOX30-202ENST00000311371 TMEM263Q8WUH6 116 aaKnown RBP12.42□□□□□ -0.42
SOX30-202ENST00000311371 TMEM101Q96IK0 257 aa12.42□□□□□ -0.42
SOX30-202ENST00000311371 PSMG3-AS1Q96PY0 264 aa12.42□□□□□ -0.42
SOX30-202ENST00000311371 TEX22C9J3V5 150 aa12.42□□□□□ -0.42
SOX30-202ENST00000311371 PRB3Q04118 309 aaPredicted RBP12.42□□□□□ -0.42
SOX30-202ENST00000311371 MED13Q9UHV7 2174 aa12.41□□□□□ -0.42
SOX30-202ENST00000311371 IGKV3D-20A0A0C4DH25 116 aa12.41□□□□□ -0.42
SOX30-202ENST00000311371 TMEM190Q8WZ59 177 aa12.41□□□□□ -0.42
SOX30-202ENST00000311371 SIGLEC9Q9Y336 463 aa12.41□□□□□ -0.42
SOX30-202ENST00000311371 P0DMU3 169 aa12.41□□□□□ -0.42
SOX30-202ENST00000311371 FAM231AP0DMU4 169 aa12.41□□□□□ -0.42
SOX30-202ENST00000311371 FAM231CP0DMU5 169 aa12.41□□□□□ -0.42
SOX30-202ENST00000311371 TMEM30BQ3MIR4 351 aa12.41□□□□□ -0.42
SOX30-202ENST00000311371 TMEM170BQ5T4T1 132 aa12.41□□□□□ -0.42
SOX30-202ENST00000311371 C11orf21Q9P2W6 132 aa12.41□□□□□ -0.42
SOX30-202ENST00000311371 TRGV5A0A0B4J1U4 118 aa12.4□□□□□ -0.42
SOX30-202ENST00000311371 SPRY2O43597 315 aa12.4□□□□□ -0.42
SOX30-202ENST00000311371 TRBV7-7A0A0K0K1E9 115 aa12.4□□□□□ -0.42
SOX30-202ENST00000311371 TMEM200BQ69YZ2 307 aa12.4□□□□□ -0.42
SOX30-202ENST00000311371 LRRC75A-AS1Q8N1F1 130 aa12.4□□□□□ -0.42
SOX30-202ENST00000311371 DYNAPQ8N1N2 210 aa12.4□□□□□ -0.42
SOX30-202ENST00000311371 RPL39LQ96EH5 51 aaKnown RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms