RNA–Protein interactions for RNA: ENST00000295317.3

RNF149-201, Transcript of ring finger protein 149, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF149, Length 2,458 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF149-201ENST00000295317 SMPXQ9UHP9 88 aa16.29■□□□□ 0.2
RNF149-201ENST00000295317 TRAV9-2A0A087WT02 112 aa16.29■□□□□ 0.2
RNF149-201ENST00000295317 BRI3O95415 125 aa16.29■□□□□ 0.2
RNF149-201ENST00000295317 OR10J6PQ8NGY7 276 aa16.29■□□□□ 0.2
RNF149-201ENST00000295317 TMEM191AQ9H0A3 160 aa16.29■□□□□ 0.2
RNF149-201ENST00000295317 LINC00469Q8N7U9 141 aa16.28■□□□□ 0.2
RNF149-201ENST00000295317 OR8A1Q8NGG7 326 aa16.28■□□□□ 0.2
RNF149-201ENST00000295317 UFC1Q9Y3C8 167 aa16.28■□□□□ 0.2
RNF149-201ENST00000295317 RNASE4P34096 147 aaKnown RBP16.28■□□□□ 0.2
RNF149-201ENST00000295317 MAP1LC3CQ9BXW4 147 aa16.27■□□□□ 0.2
RNF149-201ENST00000295317 CNFNQ9BYD5 112 aa16.27■□□□□ 0.2
RNF149-201ENST00000295317 VPREB3Q9UKI3 123 aa16.27■□□□□ 0.2
RNF149-201ENST00000295317 TCTAP57738 103 aa16.27■□□□□ 0.19
RNF149-201ENST00000295317 C18orf65Q6ZTR6 163 aa16.27■□□□□ 0.19
RNF149-201ENST00000295317 ZNF747Q9BV97 191 aa16.27■□□□□ 0.19
RNF149-201ENST00000295317 NIPBLQ6KC79 2804 aaeCLIP16.27■□□□□ 0.19
RNF149-201ENST00000295317 J3QLI3 93 aa16.26■□□□□ 0.19
RNF149-201ENST00000295317 CRXO43186 299 aaPredicted RBP16.26■□□□□ 0.19
RNF149-201ENST00000295317 SRSF2Q01130 221 aaKnown RBP16.26■□□□□ 0.19
RNF149-201ENST00000295317 WNK1Q9H4A3 2382 aa16.26■□□□□ 0.19
RNF149-201ENST00000295317 SYNJ2BPP57105 145 aa16.26■□□□□ 0.19
RNF149-201ENST00000295317 DEFB136Q30KP8 78 aa16.25■□□□□ 0.19
RNF149-201ENST00000295317 Q6YL49 198 aa16.25■□□□□ 0.19
RNF149-201ENST00000295317 IGKV3-20P01619 116 aa16.25■□□□□ 0.19
RNF149-201ENST00000295317 ZNF702PQ9H963 129 aa16.25■□□□□ 0.19
RNF149-201ENST00000295317 UQCR10Q9UDW1 63 aa16.25■□□□□ 0.19
RNF149-201ENST00000295317 FSHBP01225 129 aa16.24■□□□□ 0.19
RNF149-201ENST00000295317 SPANXN1Q5VSR9 72 aa16.24■□□□□ 0.19
RNF149-201ENST00000295317 HSPB8Q9UJY1 196 aa16.24■□□□□ 0.19
RNF149-201ENST00000295317 M0R381 172 aa16.24■□□□□ 0.19
RNF149-201ENST00000295317 GNRH2O43555 120 aa16.24■□□□□ 0.19
RNF149-201ENST00000295317 KRTAP1-3Q8IUG1 177 aa16.24■□□□□ 0.19
RNF149-201ENST00000295317 ZNF688P0C7X2 276 aa16.23■□□□□ 0.19
RNF149-201ENST00000295317 LINC00477Q96M19 166 aa16.23■□□□□ 0.19
RNF149-201ENST00000295317 TNFRSF6BO95407 300 aa16.23■□□□□ 0.19
RNF149-201ENST00000295317 ANXA2RQ3ZCQ2 193 aa16.23■□□□□ 0.19
RNF149-201ENST00000295317 C18orf15Q96N68 181 aa16.23■□□□□ 0.19
RNF149-201ENST00000295317 IGHV4OR15-8A0A075B7B6 117 aa16.22■□□□□ 0.19
RNF149-201ENST00000295317 A0A087WW49 117 aa16.22■□□□□ 0.19
RNF149-201ENST00000295317 OVOL1O14753 267 aa16.22■□□□□ 0.19
RNF149-201ENST00000295317 HNRNPA3P51991 378 aaKnown RBP16.22■□□□□ 0.19
RNF149-201ENST00000295317 DCANP1Q8TF63 244 aa16.22■□□□□ 0.19
RNF149-201ENST00000295317 TCF21O43680 179 aa16.22■□□□□ 0.19
RNF149-201ENST00000295317 WFDC11Q8NEX6 87 aa16.22■□□□□ 0.19
RNF149-201ENST00000295317 DUX3Q96PT4 197 aa16.22■□□□□ 0.19
RNF149-201ENST00000295317 NUTF2P61970 127 aaKnown RBP16.21■□□□□ 0.19
RNF149-201ENST00000295317 DMRTA1Q5VZB9 504 aa16.21■□□□□ 0.18
RNF149-201ENST00000295317 KLHDC1Q8N7A1 406 aa16.21■□□□□ 0.18
RNF149-201ENST00000295317 PDZD2O15018 2839 aa16.2■□□□□ 0.18
RNF149-201ENST00000295317 TSPOP30536 169 aa16.2■□□□□ 0.18
RNF149-201ENST00000295317 LBHQ53QV2 105 aaPredicted RBP16.2■□□□□ 0.18
RNF149-201ENST00000295317 MS4A6AQ9H2W1 248 aa16.2■□□□□ 0.18
RNF149-201ENST00000295317 PPP1R14DQ9NXH3 145 aa16.2■□□□□ 0.18
RNF149-201ENST00000295317 PSMG4Q5JS54 123 aa16.2■□□□□ 0.18
RNF149-201ENST00000295317 MUC4Q99102 2169 aa16.19■□□□□ 0.18
RNF149-201ENST00000295317 C20orf202A1L168 122 aa16.19■□□□□ 0.18
RNF149-201ENST00000295317 S100A4P26447 101 aaKnown RBP16.19■□□□□ 0.18
RNF149-201ENST00000295317 PET117Q6UWS5 81 aa16.19■□□□□ 0.18
RNF149-201ENST00000295317 NOTCH2Q04721 2471 aa16.19■□□□□ 0.18
RNF149-201ENST00000295317 HINT1P49773 126 aaPredicted RBP16.18■□□□□ 0.18
RNF149-201ENST00000295317 MAP1LC3AQ9H492 121 aa16.18■□□□□ 0.18
RNF149-201ENST00000295317 TRAV21A0A0B4J279 112 aa16.18■□□□□ 0.18
RNF149-201ENST00000295317 SNAI2O43623 268 aa16.18■□□□□ 0.18
RNF149-201ENST00000295317 G0S2P27469 103 aa16.18■□□□□ 0.18
RNF149-201ENST00000295317 HOXD3P31249 432 aaPredicted RBP16.18■□□□□ 0.18
RNF149-201ENST00000295317 LINC01545Q5VT33 79 aa16.18■□□□□ 0.18
RNF149-201ENST00000295317 K7EMT4 169 aa16.17■□□□□ 0.18
RNF149-201ENST00000295317 STPG4Q8N801 248 aa16.17■□□□□ 0.18
RNF149-201ENST00000295317 FAM19A4Q96LR4 140 aa16.17■□□□□ 0.18
RNF149-201ENST00000295317 ZNF580Q9UK33 172 aa16.17■□□□□ 0.18
RNF149-201ENST00000295317 TRAV12-2A0A075B6T6 113 aa16.17■□□□□ 0.18
RNF149-201ENST00000295317 HBDP02042 147 aa16.17■□□□□ 0.18
RNF149-201ENST00000295317 CACNG7P62955 275 aa16.17■□□□□ 0.18
RNF149-201ENST00000295317 UNC79Q9P2D8 2635 aa16.16■□□□□ 0.18
RNF149-201ENST00000295317 LEPP41159 167 aa16.16■□□□□ 0.18
RNF149-201ENST00000295317 C14orf178Q8N769 122 aaPredicted RBP16.16■□□□□ 0.18
RNF149-201ENST00000295317 LAMTOR2Q9Y2Q5 125 aa16.16■□□□□ 0.18
RNF149-201ENST00000295317 LENEPQ9Y5L5 61 aa16.16■□□□□ 0.18
RNF149-201ENST00000295317 SLURP1P55000 103 aa16.16■□□□□ 0.18
RNF149-201ENST00000295317 DEFB104AQ8WTQ1 72 aa16.16■□□□□ 0.18
RNF149-201ENST00000295317 HECTD1Q9ULT8 2610 aa16.15■□□□□ 0.18
RNF149-201ENST00000295317 FASNP49327 2511 aaKnown RBP16.15■□□□□ 0.18
RNF149-201ENST00000295317 TRAV12-3A0A0B4J271 114 aa16.15■□□□□ 0.18
RNF149-201ENST00000295317 TCAPO15273 167 aa16.15■□□□□ 0.18
RNF149-201ENST00000295317 OR2K2Q8NGT1 345 aa16.15■□□□□ 0.18
RNF149-201ENST00000295317 LGALS1P09382 135 aaKnown RBP16.14■□□□□ 0.18
RNF149-201ENST00000295317 Q6ZVH6 145 aa16.14■□□□□ 0.18
RNF149-201ENST00000295317 KHDC1LQ5JSQ8 128 aa16.14■□□□□ 0.17
RNF149-201ENST00000295317 CYB5R2Q6BCY4 276 aa16.14■□□□□ 0.17
RNF149-201ENST00000295317 NRACQ8N912 160 aa16.14■□□□□ 0.17
RNF149-201ENST00000295317 PHLDA3Q9Y5J5 127 aa16.14■□□□□ 0.17
RNF149-201ENST00000295317 NOTCH3Q9UM47 2321 aa16.14■□□□□ 0.17
RNF149-201ENST00000295317 PPBPP02775 128 aa16.13■□□□□ 0.17
RNF149-201ENST00000295317 RNASE3P12724 160 aaKnown RBP16.13■□□□□ 0.17
RNF149-201ENST00000295317 ASIPP42127 132 aa16.13■□□□□ 0.17
RNF149-201ENST00000295317 SMIM15Q7Z3B0 74 aa16.13■□□□□ 0.17
RNF149-201ENST00000295317 ADAMTSL5Q6ZMM2 481 aa16.12■□□□□ 0.17
RNF149-201ENST00000295317 C11orf44Q8N8P7 122 aa16.12■□□□□ 0.17
RNF149-201ENST00000295317 IFI27L1Q96BM0 104 aa16.12■□□□□ 0.17
RNF149-201ENST00000295317 JPT2Q9H910 190 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms