RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 U3KQE9 123 aa14.16□□□□□ -0.14
COL5A3-201ENST00000264828 RSPO1Q2MKA7 263 aaPredicted RBP14.16□□□□□ -0.14
COL5A3-201ENST00000264828 HEATR1Q9H583 2144 aaKnown RBP14.16□□□□□ -0.14
COL5A3-201ENST00000264828 IGKV2D-24A0A075B6R9 120 aa14.16□□□□□ -0.14
COL5A3-201ENST00000264828 IGLV2-23P01705 113 aa14.15□□□□□ -0.14
COL5A3-201ENST00000264828 C5orf47Q569G3 176 aa14.15□□□□□ -0.14
COL5A3-201ENST00000264828 BOD1L2Q8IYS8 172 aa14.15□□□□□ -0.14
COL5A3-201ENST00000264828 LHBP01229 141 aa14.15□□□□□ -0.14
COL5A3-201ENST00000264828 PRR20EP86478 221 aa14.15□□□□□ -0.14
COL5A3-201ENST00000264828 PRR20CP86479 221 aa14.15□□□□□ -0.14
COL5A3-201ENST00000264828 PRR20DP86480 221 aa14.15□□□□□ -0.14
COL5A3-201ENST00000264828 PRR20BP86481 221 aa14.15□□□□□ -0.14
COL5A3-201ENST00000264828 PRR20AP86496 221 aa14.15□□□□□ -0.14
COL5A3-201ENST00000264828 RPL39LQ96EH5 51 aaKnown RBP14.15□□□□□ -0.14
COL5A3-201ENST00000264828 NCOR1P1Q9H4R4 102 aa14.14□□□□□ -0.15
COL5A3-201ENST00000264828 ORMDL1Q9P0S3 153 aa14.14□□□□□ -0.15
COL5A3-201ENST00000264828 B5MCH6 92 aa14.14□□□□□ -0.15
COL5A3-201ENST00000264828 HOXB4P17483 251 aaPredicted RBP14.14□□□□□ -0.15
COL5A3-201ENST00000264828 SH2D6Q7Z4S9 175 aa14.14□□□□□ -0.15
COL5A3-201ENST00000264828 UBE2BP63146 152 aa14.14□□□□□ -0.15
COL5A3-201ENST00000264828 NUP210Q8TEM1 1887 aaPredicted RBP14.14□□□□□ -0.15
COL5A3-201ENST00000264828 IGHV4-28A0A0C4DH34 117 aa14.13□□□□□ -0.15
COL5A3-201ENST00000264828 AGPAT4-IT1Q9H0P7 198 aa14.13□□□□□ -0.15
COL5A3-201ENST00000264828 C22orf46C9J442 243 aa14.13□□□□□ -0.15
COL5A3-201ENST00000264828 DEFB136Q30KP8 78 aa14.13□□□□□ -0.15
COL5A3-201ENST00000264828 ETV2O00321 342 aaPredicted RBP14.13□□□□□ -0.15
COL5A3-201ENST00000264828 Q9HAA7 133 aa14.13□□□□□ -0.15
COL5A3-201ENST00000264828 ZNF493Q6ZR52 646 aa14.12□□□□□ -0.15
COL5A3-201ENST00000264828 C5orf38Q86SI9 138 aa14.12□□□□□ -0.15
COL5A3-201ENST00000264828 RPL18AQ02543 176 aaKnown RBP14.12□□□□□ -0.15
COL5A3-201ENST00000264828 LINC00173Q6ZV60 143 aa14.12□□□□□ -0.15
COL5A3-201ENST00000264828 APRG1Q8IVJ8 170 aa14.12□□□□□ -0.15
COL5A3-201ENST00000264828 RMI2Q96E14 147 aa14.12□□□□□ -0.15
COL5A3-201ENST00000264828 CACNA1EQ15878 2313 aa14.12□□□□□ -0.15
COL5A3-201ENST00000264828 RHOHQ15669 191 aa14.11□□□□□ -0.15
COL5A3-201ENST00000264828 FOXI2Q6ZQN5 318 aa14.11□□□□□ -0.15
COL5A3-201ENST00000264828 SLC25A29Q8N8R3 303 aa14.11□□□□□ -0.15
COL5A3-201ENST00000264828 IGLV1-44P01699 117 aa14.11□□□□□ -0.15
COL5A3-201ENST00000264828 CLPSL1A2RUU4 121 aa14.1□□□□□ -0.15
COL5A3-201ENST00000264828 TRAV4A0A0B4J268 109 aa14.1□□□□□ -0.15
COL5A3-201ENST00000264828 SPANXDQ9BXN6 97 aa14.1□□□□□ -0.15
COL5A3-201ENST00000264828 SRSF2Q01130 221 aaKnown RBP14.1□□□□□ -0.15
COL5A3-201ENST00000264828 WIPF2Q8TF74 440 aaPredicted RBP14.1□□□□□ -0.15
COL5A3-201ENST00000264828 TMEM258P61165 79 aa14.1□□□□□ -0.15
COL5A3-201ENST00000264828 INTS1Q8N201 2190 aaKnown RBP14.1□□□□□ -0.15
COL5A3-201ENST00000264828 SPRNQ5BIV9 151 aa14.09□□□□□ -0.15
COL5A3-201ENST00000264828 ARFGEF3Q5TH69 2177 aa14.09□□□□□ -0.15
COL5A3-201ENST00000264828 NUPR1O60356 82 aa14.09□□□□□ -0.15
COL5A3-201ENST00000264828 DOCK9Q9BZ29 2069 aa14.09□□□□□ -0.15
COL5A3-201ENST00000264828 PIP4P1Q86T03 277 aa14.08□□□□□ -0.15
COL5A3-201ENST00000264828 IGLV10-54A0A075B6I4 117 aa14.08□□□□□ -0.16
COL5A3-201ENST00000264828 IGHG2P01859 326 aa14.08□□□□□ -0.16
COL5A3-201ENST00000264828 IGLL5B9A064 214 aa14.08□□□□□ -0.16
COL5A3-201ENST00000264828 IGHV4-59P01825 116 aa14.08□□□□□ -0.16
COL5A3-201ENST00000264828 IGKV3D-7A0A0C4DH55 119 aa14.07□□□□□ -0.16
COL5A3-201ENST00000264828 MUSTN1Q8IVN3 82 aa14.07□□□□□ -0.16
COL5A3-201ENST00000264828 KMT2EQ8IZD2 1858 aa14.07□□□□□ -0.16
COL5A3-201ENST00000264828 TEX48A0A1B0GUV7 120 aa14.07□□□□□ -0.16
COL5A3-201ENST00000264828 DEFB112Q30KQ8 113 aa14.07□□□□□ -0.16
COL5A3-201ENST00000264828 RITA1Q96K30 269 aa14.07□□□□□ -0.16
COL5A3-201ENST00000264828 CTSZQ9UBR2 303 aa14.07□□□□□ -0.16
COL5A3-201ENST00000264828 FAM215AQ9Y5M1 114 aa14.07□□□□□ -0.16
COL5A3-201ENST00000264828 PI4KAP42356 2102 aa14.06□□□□□ -0.16
COL5A3-201ENST00000264828 TRIOBPQ9H2D6 2365 aa14.06□□□□□ -0.16
COL5A3-201ENST00000264828 BUB3O43684 328 aa14.06□□□□□ -0.16
COL5A3-201ENST00000264828 DEFB125Q8N687 156 aa14.06□□□□□ -0.16
COL5A3-201ENST00000264828 J3QLI3 93 aa14.06□□□□□ -0.16
COL5A3-201ENST00000264828 ZFP2Q6ZN57 461 aa14.06□□□□□ -0.16
COL5A3-201ENST00000264828 TDRG1Q3Y452 100 aa14.06□□□□□ -0.16
COL5A3-201ENST00000264828 COX7B2Q8TF08 81 aa14.05□□□□□ -0.16
COL5A3-201ENST00000264828 MSRB1Q9NZV6 116 aa14.05□□□□□ -0.16
COL5A3-201ENST00000264828 ELANEP08246 267 aa14.05□□□□□ -0.16
COL5A3-201ENST00000264828 SLURP1P55000 103 aa14.05□□□□□ -0.16
COL5A3-201ENST00000264828 DAND5Q8N907 189 aa14.05□□□□□ -0.16
COL5A3-201ENST00000264828 ANAPC1Q9H1A4 1944 aa14.05□□□□□ -0.16
COL5A3-201ENST00000264828 IGLV3-1P01715 115 aa14.05□□□□□ -0.16
COL5A3-201ENST00000264828 ICOSQ9Y6W8 199 aa14.05□□□□□ -0.16
COL5A3-201ENST00000264828 POLEQ07864 2286 aa14.05□□□□□ -0.16
COL5A3-201ENST00000264828 KIR2DL5BA0A0G2JN68 375 aa14.05□□□□□ -0.16
COL5A3-201ENST00000264828 KIR2DL5BA0A0G2JPC4 375 aa14.05□□□□□ -0.16
COL5A3-201ENST00000264828 RBAKDNA6NC62 111 aa14.05□□□□□ -0.16
COL5A3-201ENST00000264828 KIR2DL5AQ8N109 375 aa14.05□□□□□ -0.16
COL5A3-201ENST00000264828 ANKRD39Q53RE8 183 aa14.04□□□□□ -0.16
COL5A3-201ENST00000264828 J3QKU1 62 aa14.04□□□□□ -0.16
COL5A3-201ENST00000264828 PRSS47A8MTI9 375 aa14.04□□□□□ -0.16
COL5A3-201ENST00000264828 IL15RAQ13261 267 aa14.04□□□□□ -0.16
COL5A3-201ENST00000264828 DKK4Q9UBT3 224 aa14.04□□□□□ -0.16
COL5A3-201ENST00000264828 HERV-K104P63124 156 aa14.03□□□□□ -0.16
COL5A3-201ENST00000264828 LYPD6BQ8NI32 183 aa14.03□□□□□ -0.16
COL5A3-201ENST00000264828 HELZP42694 1942 aaKnown RBP14.03□□□□□ -0.16
COL5A3-201ENST00000264828 ZDBF2Q9HCK1 2354 aa14.03□□□□□ -0.16
COL5A3-201ENST00000264828 POU2AF1Q16633 256 aa14.03□□□□□ -0.16
COL5A3-201ENST00000264828 NCR3O14931 201 aa14.03□□□□□ -0.16
COL5A3-201ENST00000264828 IGHV3-30P01768 117 aa14.03□□□□□ -0.16
COL5A3-201ENST00000264828 IGHV3-33P01772 117 aa14.03□□□□□ -0.16
COL5A3-201ENST00000264828 IGHV3-30-3P0DP02 117 aa14.03□□□□□ -0.16
COL5A3-201ENST00000264828 IGHV3-30-5P0DP03 117 aa14.03□□□□□ -0.16
COL5A3-201ENST00000264828 GRNP28799 593 aaKnown RBP14.02□□□□□ -0.16
COL5A3-201ENST00000264828 C11orf53Q8IXP5 236 aa14.02□□□□□ -0.16
COL5A3-201ENST00000264828 ETDCA0A1B0GVM5 59 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms