RNA–Protein interactions for RNA: ENST00000263666.8

PDZRN3-201, Transcript of PDZ domain containing ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZRN3, Length 4,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-201ENST00000263666 PPBPP02775 128 aa12.58□□□□□ -0.4
PDZRN3-201ENST00000263666 LAGE3Q14657 143 aa12.58□□□□□ -0.4
PDZRN3-201ENST00000263666 A0A1B0GWB2 263 aa12.58□□□□□ -0.4
PDZRN3-201ENST00000263666 PRSS2P07478 247 aa12.58□□□□□ -0.4
PDZRN3-201ENST00000263666 LINC00477Q96M19 166 aa12.58□□□□□ -0.4
PDZRN3-201ENST00000263666 INS-IGF2F8WCM5 200 aa12.58□□□□□ -0.4
PDZRN3-201ENST00000263666 H3BUX3 64 aa12.58□□□□□ -0.4
PDZRN3-201ENST00000263666 ZNF688P0C7X2 276 aa12.58□□□□□ -0.4
PDZRN3-201ENST00000263666 Q6ZQT7 251 aa12.58□□□□□ -0.4
PDZRN3-201ENST00000263666 GTSF1LQ9H1H1 148 aa12.58□□□□□ -0.4
PDZRN3-201ENST00000263666 ZNF479Q96JC4 524 aa12.57□□□□□ -0.4
PDZRN3-201ENST00000263666 ITLN2Q8WWU7 325 aaPredicted RBP12.57□□□□□ -0.4
PDZRN3-201ENST00000263666 IGHV3OR16-12A0A075B7B8 117 aa12.57□□□□□ -0.4
PDZRN3-201ENST00000263666 RAB9AP51151 201 aa12.57□□□□□ -0.4
PDZRN3-201ENST00000263666 C8orf31Q8N9H6 132 aa12.57□□□□□ -0.4
PDZRN3-201ENST00000263666 OR9G4Q8NGQ1 327 aa12.57□□□□□ -0.4
PDZRN3-201ENST00000263666 IGHV3-73A0A0B4J1V6 119 aa12.56□□□□□ -0.4
PDZRN3-201ENST00000263666 M0R1W7 72 aa12.56□□□□□ -0.4
PDZRN3-201ENST00000263666 SRSF1Q07955 248 aaKnown RBP eCLIP12.56□□□□□ -0.4
PDZRN3-201ENST00000263666 PRORYQ9H606 182 aa12.56□□□□□ -0.4
PDZRN3-201ENST00000263666 TRAV12-3A0A0B4J271 114 aa12.56□□□□□ -0.4
PDZRN3-201ENST00000263666 OVOL3O00110 214 aa12.56□□□□□ -0.4
PDZRN3-201ENST00000263666 NPFFO15130 113 aa12.56□□□□□ -0.4
PDZRN3-201ENST00000263666 CHTOPQ9Y3Y2 248 aaKnown RBP12.55□□□□□ -0.4
PDZRN3-201ENST00000263666 HIVEP2P31629 2446 aa12.55□□□□□ -0.4
PDZRN3-201ENST00000263666 ZNF815PA8K554 130 aa12.55□□□□□ -0.4
PDZRN3-201ENST00000263666 LGALS9BQ3B8N2 356 aa12.55□□□□□ -0.4
PDZRN3-201ENST00000263666 LGALS9CQ6DKI2 356 aa12.55□□□□□ -0.4
PDZRN3-201ENST00000263666 FXYD2P54710 66 aa12.55□□□□□ -0.4
PDZRN3-201ENST00000263666 FN1P02751 2386 aaKnown RBP12.55□□□□□ -0.4
PDZRN3-201ENST00000263666 FSTL3O95633 263 aa12.54□□□□□ -0.4
PDZRN3-201ENST00000263666 IGF1P05019 195 aa12.54□□□□□ -0.4
PDZRN3-201ENST00000263666 CRYGBP07316 175 aa12.54□□□□□ -0.4
PDZRN3-201ENST00000263666 C9orf118A6NHY6 69 aa12.54□□□□□ -0.4
PDZRN3-201ENST00000263666 JMJD1CQ15652 2540 aa12.54□□□□□ -0.4
PDZRN3-201ENST00000263666 NRGNQ92686 78 aa12.53□□□□□ -0.4
PDZRN3-201ENST00000263666 NPIPB6E9PJ23 425 aa12.53□□□□□ -0.4
PDZRN3-201ENST00000263666 GNRH2O43555 120 aa12.53□□□□□ -0.4
PDZRN3-201ENST00000263666 HOXB4P17483 251 aaPredicted RBP12.53□□□□□ -0.4
PDZRN3-201ENST00000263666 RPL39LQ96EH5 51 aaKnown RBP12.53□□□□□ -0.4
PDZRN3-201ENST00000263666 B4DSR2 109 aa12.53□□□□□ -0.4
PDZRN3-201ENST00000263666 HERVK_113P61574 105 aa12.53□□□□□ -0.4
PDZRN3-201ENST00000263666 ETDBQ3ZM63 59 aa12.53□□□□□ -0.4
PDZRN3-201ENST00000263666 RNF223E7ERA6 249 aa12.52□□□□□ -0.4
PDZRN3-201ENST00000263666 TMEM95Q3KNT9 176 aa12.52□□□□□ -0.4
PDZRN3-201ENST00000263666 CSTL1Q9H114 145 aa12.52□□□□□ -0.4
PDZRN3-201ENST00000263666 AGRNO00468 2067 aa12.52□□□□□ -0.4
PDZRN3-201ENST00000263666 MRGPRG-AS1Q2M3A8 158 aa12.52□□□□□ -0.41
PDZRN3-201ENST00000263666 Q8N9W7 124 aa12.52□□□□□ -0.41
PDZRN3-201ENST00000263666 NPFFR1Q9GZQ6 430 aa12.52□□□□□ -0.41
PDZRN3-201ENST00000263666 TRAV12-2A0A075B6T6 113 aa12.52□□□□□ -0.41
PDZRN3-201ENST00000263666 TRAV21A0A0B4J279 112 aa12.52□□□□□ -0.41
PDZRN3-201ENST00000263666 IGKV3D-20A0A0C4DH25 116 aa12.52□□□□□ -0.41
PDZRN3-201ENST00000263666 WI2-2373I1.2A0A1W2PRP0 233 aa12.52□□□□□ -0.41
PDZRN3-201ENST00000263666 PSMG4Q5JS54 123 aa12.52□□□□□ -0.41
PDZRN3-201ENST00000263666 OR11H6Q8NGC7 330 aa12.52□□□□□ -0.41
PDZRN3-201ENST00000263666 KIR2DL4Q99706 377 aa12.52□□□□□ -0.41
PDZRN3-201ENST00000263666 MINOS1Q5TGZ0 78 aa12.51□□□□□ -0.41
PDZRN3-201ENST00000263666 YAE1D1Q9NRH1 226 aa12.51□□□□□ -0.41
PDZRN3-201ENST00000263666 MINOS1-NBL1R4GNA1 71 aa12.51□□□□□ -0.41
PDZRN3-201ENST00000263666 IGKV2D-26A0A0A0MRZ7 120 aa12.51□□□□□ -0.41
PDZRN3-201ENST00000263666 H3BMG7 143 aa12.51□□□□□ -0.41
PDZRN3-201ENST00000263666 ANXA2RQ3ZCQ2 193 aa12.51□□□□□ -0.41
PDZRN3-201ENST00000263666 C11orf44Q8N8P7 122 aa12.51□□□□□ -0.41
PDZRN3-201ENST00000263666 J3QKU1 62 aa12.51□□□□□ -0.41
PDZRN3-201ENST00000263666 TRBV12-3P01733 135 aa12.51□□□□□ -0.41
PDZRN3-201ENST00000263666 FAM110DQ8TAY7 271 aaPredicted RBP12.51□□□□□ -0.41
PDZRN3-201ENST00000263666 SRSF8Q9BRL6 282 aaKnown RBP12.51□□□□□ -0.41
PDZRN3-201ENST00000263666 RHPN1-AS1Q9BWJ2 59 aa12.51□□□□□ -0.41
PDZRN3-201ENST00000263666 BUB3O43684 328 aa12.51□□□□□ -0.41
PDZRN3-201ENST00000263666 ADAMTSL5Q6ZMM2 481 aa12.51□□□□□ -0.41
PDZRN3-201ENST00000263666 H3BRM9 83 aa12.5□□□□□ -0.41
PDZRN3-201ENST00000263666 FBXL19-AS1Q494R0 122 aa12.49□□□□□ -0.41
PDZRN3-201ENST00000263666 TRBV25-1A0A075B6N4 114 aa12.49□□□□□ -0.41
PDZRN3-201ENST00000263666 NPC2P61916 151 aa12.49□□□□□ -0.41
PDZRN3-201ENST00000263666 ID1P41134 155 aa12.49□□□□□ -0.41
PDZRN3-201ENST00000263666 DSCR9P59020 149 aa12.49□□□□□ -0.41
PDZRN3-201ENST00000263666 SMG1Q96Q15 3661 aaKnown RBP12.49□□□□□ -0.41
PDZRN3-201ENST00000263666 RELNP78509 3460 aa12.49□□□□□ -0.41
PDZRN3-201ENST00000263666 A0A0U1RRA0 63 aa12.48□□□□□ -0.41
PDZRN3-201ENST00000263666 A0A1W2PPM0 123 aa12.48□□□□□ -0.41
PDZRN3-201ENST00000263666 MOB4Q9Y3A3 225 aa12.48□□□□□ -0.41
PDZRN3-201ENST00000263666 SMAD5-AS1Q9Y6J3 95 aa12.48□□□□□ -0.41
PDZRN3-201ENST00000263666 ASH1LQ9NR48 2969 aaKnown RBP12.48□□□□□ -0.41
PDZRN3-201ENST00000263666 RBX1P62877 108 aa12.48□□□□□ -0.41
PDZRN3-201ENST00000263666 BLCAPP62952 87 aa12.48□□□□□ -0.41
PDZRN3-201ENST00000263666 C2orf66Q6UXQ4 117 aa12.48□□□□□ -0.41
PDZRN3-201ENST00000263666 UBE2E1P51965 193 aa12.48□□□□□ -0.41
PDZRN3-201ENST00000263666 Q8N8P6 123 aa12.48□□□□□ -0.41
PDZRN3-201ENST00000263666 SLC25A16P16260 332 aa12.48□□□□□ -0.41
PDZRN3-201ENST00000263666 Q5PR19 223 aa12.48□□□□□ -0.41
PDZRN3-201ENST00000263666 DGAT2L7PQ6IED9 249 aa12.48□□□□□ -0.41
PDZRN3-201ENST00000263666 UNQ9165/PRO28630Q6UXU0 137 aa12.48□□□□□ -0.41
PDZRN3-201ENST00000263666 SH2D6Q7Z4S9 175 aa12.48□□□□□ -0.41
PDZRN3-201ENST00000263666 PGPEP1Q9NXJ5 209 aa12.48□□□□□ -0.41
PDZRN3-201ENST00000263666 KLK9Q9UKQ9 250 aa12.48□□□□□ -0.41
PDZRN3-201ENST00000263666 C19orf84I3L1E1 186 aa12.47□□□□□ -0.41
PDZRN3-201ENST00000263666 LGALS3P17931 250 aaKnown RBP12.47□□□□□ -0.41
PDZRN3-201ENST00000263666 SUMO2P61956 95 aaKnown RBP12.47□□□□□ -0.41
PDZRN3-201ENST00000263666 C2orf91Q6ZV80 131 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 133 ms