RNA–Protein interactions for RNA: ENST00000262426.5

FOXF1-201, Transcript of forkhead box F1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXF1, Length 3,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1-201ENST00000262426 DKK2Q9UBU2 259 aa11.19□□□□□ -0.62
FOXF1-201ENST00000262426 CR1P17927 2039 aa11.19□□□□□ -0.62
FOXF1-201ENST00000262426 PEX7O00628 323 aa11.19□□□□□ -0.62
FOXF1-201ENST00000262426 FGF6P10767 208 aa11.19□□□□□ -0.62
FOXF1-201ENST00000262426 HIST2H2BDQ6DRA6 164 aa11.19□□□□□ -0.62
FOXF1-201ENST00000262426 WFDC11Q8NEX6 87 aa11.19□□□□□ -0.62
FOXF1-201ENST00000262426 SMKR1H3BMG3 65 aa11.19□□□□□ -0.62
FOXF1-201ENST00000262426 SLC25A16P16260 332 aa11.19□□□□□ -0.62
FOXF1-201ENST00000262426 C10orf99Q6UWK7 81 aa11.19□□□□□ -0.62
FOXF1-201ENST00000262426 KLK15Q9H2R5 256 aa11.19□□□□□ -0.62
FOXF1-201ENST00000262426 MS4A6AQ9H2W1 248 aa11.19□□□□□ -0.62
FOXF1-201ENST00000262426 M0R3E3 92 aa11.18□□□□□ -0.62
FOXF1-201ENST00000262426 CRXO43186 299 aaPredicted RBP11.18□□□□□ -0.62
FOXF1-201ENST00000262426 SCGB2A1O75556 95 aa11.18□□□□□ -0.62
FOXF1-201ENST00000262426 ZNF418Q8TF45 676 aaPredicted RBP11.18□□□□□ -0.62
FOXF1-201ENST00000262426 MRAP2Q96G30 205 aa11.18□□□□□ -0.62
FOXF1-201ENST00000262426 Q9H3A6 140 aa11.18□□□□□ -0.62
FOXF1-201ENST00000262426 SPANXB1Q9NS25 103 aaPredicted RBP11.18□□□□□ -0.62
FOXF1-201ENST00000262426 LY96Q9Y6Y9 160 aa11.18□□□□□ -0.62
FOXF1-201ENST00000262426 J3QR89 54 aa11.18□□□□□ -0.62
FOXF1-201ENST00000262426 TRBV12-3P01733 135 aa11.18□□□□□ -0.62
FOXF1-201ENST00000262426 SMIM20Q8N5G0 67 aa11.18□□□□□ -0.62
FOXF1-201ENST00000262426 PTH2Q96A98 100 aa11.18□□□□□ -0.62
FOXF1-201ENST00000262426 VGLL1Q99990 258 aa11.18□□□□□ -0.62
FOXF1-201ENST00000262426 ZNF747Q9BV97 191 aa11.18□□□□□ -0.62
FOXF1-201ENST00000262426 TRAV41A0A0B4J266 112 aa11.17□□□□□ -0.62
FOXF1-201ENST00000262426 FAM110DQ8TAY7 271 aaPredicted RBP11.17□□□□□ -0.62
FOXF1-201ENST00000262426 CCDC140Q96MF4 163 aa11.17□□□□□ -0.62
FOXF1-201ENST00000262426 LINC01545Q5VT33 79 aa11.17□□□□□ -0.62
FOXF1-201ENST00000262426 DSCR9P59020 149 aa11.17□□□□□ -0.62
FOXF1-201ENST00000262426 IGKV2D-26A0A0A0MRZ7 120 aa11.16□□□□□ -0.62
FOXF1-201ENST00000262426 TRGV3P03979 118 aa11.16□□□□□ -0.62
FOXF1-201ENST00000262426 IGHV4-31P0DP07 118 aa11.16□□□□□ -0.62
FOXF1-201ENST00000262426 UFC1Q9Y3C8 167 aa11.16□□□□□ -0.62
FOXF1-201ENST00000262426 ARMS2P0C7Q2 107 aa11.16□□□□□ -0.62
FOXF1-201ENST00000262426 GTSCR1Q86UQ5 136 aa11.16□□□□□ -0.62
FOXF1-201ENST00000262426 BEX4Q9NWD9 120 aaPredicted RBP11.16□□□□□ -0.62
FOXF1-201ENST00000262426 HLA-DMBP28068 263 aa11.15□□□□□ -0.62
FOXF1-201ENST00000262426 CHCHD1Q96BP2 118 aaKnown RBP11.15□□□□□ -0.62
FOXF1-201ENST00000262426 SHANK2-AS3Q9BTD1 123 aa11.15□□□□□ -0.62
FOXF1-201ENST00000262426 RPP21Q9H633 154 aaKnown RBP11.15□□□□□ -0.62
FOXF1-201ENST00000262426 EPDR1Q9UM22 224 aa11.15□□□□□ -0.62
FOXF1-201ENST00000262426 PF4V1P10720 104 aa11.15□□□□□ -0.62
FOXF1-201ENST00000262426 PRNTQ86SH4 94 aa11.15□□□□□ -0.62
FOXF1-201ENST00000262426 PSG8Q9UQ74 426 aa11.15□□□□□ -0.62
FOXF1-201ENST00000262426 TRBV20-1A0A075B6N2 111 aa11.15□□□□□ -0.62
FOXF1-201ENST00000262426 APOMO95445 188 aa11.15□□□□□ -0.62
FOXF1-201ENST00000262426 SMIM17P0DL12 118 aa11.15□□□□□ -0.62
FOXF1-201ENST00000262426 GOLT1AQ6ZVE7 132 aa11.15□□□□□ -0.62
FOXF1-201ENST00000262426 ZNF502Q8TBZ5 544 aa11.15□□□□□ -0.62
FOXF1-201ENST00000262426 ANAPC13Q9BS18 74 aa11.15□□□□□ -0.62
FOXF1-201ENST00000262426 SORL1Q92673 2214 aa11.14□□□□□ -0.63
FOXF1-201ENST00000262426 CSN1S1P47710 185 aa11.14□□□□□ -0.63
FOXF1-201ENST00000262426 ZNF479Q96JC4 524 aa11.14□□□□□ -0.63
FOXF1-201ENST00000262426 WI2-2373I1.2A0A1W2PRP0 233 aa11.14□□□□□ -0.63
FOXF1-201ENST00000262426 A6NDX4 124 aa11.14□□□□□ -0.63
FOXF1-201ENST00000262426 H3BRN7 92 aa11.14□□□□□ -0.63
FOXF1-201ENST00000262426 ZNF414Q96IQ9 312 aa11.14□□□□□ -0.63
FOXF1-201ENST00000262426 AKAP9Q99996 3911 aa11.13□□□□□ -0.63
FOXF1-201ENST00000262426 WIPF2Q8TF74 440 aaPredicted RBP11.13□□□□□ -0.63
FOXF1-201ENST00000262426 MYCNOSP40205 109 aa11.13□□□□□ -0.63
FOXF1-201ENST00000262426 KRTAP1-3Q8IUG1 177 aa11.13□□□□□ -0.63
FOXF1-201ENST00000262426 IGKV3-7A0A075B6H7 116 aa11.13□□□□□ -0.63
FOXF1-201ENST00000262426 A0A1B0GXF2 115 aa11.13□□□□□ -0.63
FOXF1-201ENST00000262426 GAGE13Q4V321 117 aa11.13□□□□□ -0.63
FOXF1-201ENST00000262426 BOD1L2Q8IYS8 172 aa11.13□□□□□ -0.63
FOXF1-201ENST00000262426 H3BVH4 76 aa11.12□□□□□ -0.63
FOXF1-201ENST00000262426 MRPL16Q9NX20 251 aaKnown RBP11.12□□□□□ -0.63
FOXF1-201ENST00000262426 D6R8Y8 96 aa11.12□□□□□ -0.63
FOXF1-201ENST00000262426 CHAC1Q9BUX1 264 aa11.12□□□□□ -0.63
FOXF1-201ENST00000262426 C8orf86Q6ZUL3 223 aa11.12□□□□□ -0.63
FOXF1-201ENST00000262426 PSMG3-AS1Q96PY0 264 aa11.12□□□□□ -0.63
FOXF1-201ENST00000262426 WNK1Q9H4A3 2382 aa11.11□□□□□ -0.63
FOXF1-201ENST00000262426 NIPBLQ6KC79 2804 aaeCLIP11.11□□□□□ -0.63
FOXF1-201ENST00000262426 TRBV19A0A075B6N1 114 aa11.11□□□□□ -0.63
FOXF1-201ENST00000262426 NPIPB6E9PJ23 425 aa11.11□□□□□ -0.63
FOXF1-201ENST00000262426 TCRAP04437 139 aa11.11□□□□□ -0.63
FOXF1-201ENST00000262426 SCGB1A1P11684 91 aa11.11□□□□□ -0.63
FOXF1-201ENST00000262426 XGP55808 180 aa11.11□□□□□ -0.63
FOXF1-201ENST00000262426 BAHCC1Q9P281 2608 aa11.11□□□□□ -0.63
FOXF1-201ENST00000262426 LOC107984156A0A0G2JMH3 177 aa11.11□□□□□ -0.63
FOXF1-201ENST00000262426 PRSS1P07477 247 aa11.11□□□□□ -0.63
FOXF1-201ENST00000262426 ARL17AQ8IVW1 177 aa11.11□□□□□ -0.63
FOXF1-201ENST00000262426 A0A1B0GW15 77 aa11.1□□□□□ -0.63
FOXF1-201ENST00000262426 PRSS29PA6NIE9 313 aa11.1□□□□□ -0.63
FOXF1-201ENST00000262426 UNQ9165/PRO28630Q6UXU0 137 aa11.1□□□□□ -0.63
FOXF1-201ENST00000262426 SMAD5-AS1Q9Y6J3 95 aa11.1□□□□□ -0.63
FOXF1-201ENST00000262426 HOXA3O43365 443 aaPredicted RBP11.1□□□□□ -0.63
FOXF1-201ENST00000262426 RNF182Q8N6D2 247 aa11.1□□□□□ -0.63
FOXF1-201ENST00000262426 TMEM213A2RRL7 107 aa11.1□□□□□ -0.63
FOXF1-201ENST00000262426 EDN2P20800 178 aa11.1□□□□□ -0.63
FOXF1-201ENST00000262426 FAM162BQ5T6X4 162 aa11.1□□□□□ -0.63
FOXF1-201ENST00000262426 RBPMS2Q6ZRY4 209 aaKnown RBP11.1□□□□□ -0.63
FOXF1-201ENST00000262426 AMN1Q8IY45 258 aa11.1□□□□□ -0.63
FOXF1-201ENST00000262426 EEF1AKMT3Q96AZ1 226 aa11.1□□□□□ -0.63
FOXF1-201ENST00000262426 MRPS12O15235 138 aaKnown RBP11.09□□□□□ -0.63
FOXF1-201ENST00000262426 IGHG2P01859 326 aa11.09□□□□□ -0.63
FOXF1-201ENST00000262426 FHL3Q13643 280 aa11.09□□□□□ -0.63
FOXF1-201ENST00000262426 SIGLEC15Q6ZMC9 328 aa11.09□□□□□ -0.63
FOXF1-201ENST00000262426 KIR2DL4Q99706 377 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms