RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 IBA57Q5T440 356 aaKnown RBP4.17□□□□□ -1.74
TOPBP1-201ENST00000260810 Q6ZSV7 163 aa4.17□□□□□ -1.74
TOPBP1-201ENST00000260810 OR2D3Q8NGH3 330 aa4.17□□□□□ -1.74
TOPBP1-201ENST00000260810 TCF19Q9Y242 345 aa4.17□□□□□ -1.74
TOPBP1-201ENST00000260810 SRSF9Q13242 221 aaKnown RBP eCLIP4.17□□□□□ -1.74
TOPBP1-201ENST00000260810 CBLN2Q8IUK8 224 aa4.17□□□□□ -1.74
TOPBP1-201ENST00000260810 TP73-AS1Q9UF72 201 aa4.17□□□□□ -1.74
TOPBP1-201ENST00000260810 TMEM89A2RUT3 159 aa4.17□□□□□ -1.74
TOPBP1-201ENST00000260810 SPRY2O43597 315 aa4.17□□□□□ -1.74
TOPBP1-201ENST00000260810 CA2P00918 260 aa4.17□□□□□ -1.74
TOPBP1-201ENST00000260810 CD69Q07108 199 aa4.17□□□□□ -1.74
TOPBP1-201ENST00000260810 DMRTA1Q5VZB9 504 aa4.17□□□□□ -1.74
TOPBP1-201ENST00000260810 C12orf57Q99622 126 aa4.17□□□□□ -1.74
TOPBP1-201ENST00000260810 RHODO00212 210 aa4.16□□□□□ -1.74
TOPBP1-201ENST00000260810 IGHG2P01859 326 aa4.16□□□□□ -1.74
TOPBP1-201ENST00000260810 RPL24P83731 157 aaKnown RBP4.16□□□□□ -1.74
TOPBP1-201ENST00000260810 ZNF415Q09FC8 603 aa4.16□□□□□ -1.74
TOPBP1-201ENST00000260810 UFSP1Q6NVU6 142 aa4.16□□□□□ -1.74
TOPBP1-201ENST00000260810 COX8CQ7Z4L0 72 aa4.16□□□□□ -1.74
TOPBP1-201ENST00000260810 OR1N2Q8NGR9 330 aa4.16□□□□□ -1.74
TOPBP1-201ENST00000260810 FBXL15Q9H469 300 aa4.16□□□□□ -1.74
TOPBP1-201ENST00000260810 LOC105371267A0A1B0GV96 52 aa4.16□□□□□ -1.74
TOPBP1-201ENST00000260810 CKS2P33552 79 aa4.16□□□□□ -1.74
TOPBP1-201ENST00000260810 HBBP68871 147 aa4.16□□□□□ -1.74
TOPBP1-201ENST00000260810 LINC00477Q96M19 166 aa4.16□□□□□ -1.74
TOPBP1-201ENST00000260810 A0A087WWC5 75 aa4.16□□□□□ -1.74
TOPBP1-201ENST00000260810 ZNF253O75346 499 aa4.16□□□□□ -1.74
TOPBP1-201ENST00000260810 NUDT3O95989 172 aa4.16□□□□□ -1.74
TOPBP1-201ENST00000260810 CXCL1P09341 107 aa4.16□□□□□ -1.74
TOPBP1-201ENST00000260810 IGFL4Q6B9Z1 124 aa4.16□□□□□ -1.74
TOPBP1-201ENST00000260810 MRPL54Q6P161 138 aaKnown RBP4.16□□□□□ -1.74
TOPBP1-201ENST00000260810 APRG1Q8IVJ8 170 aa4.16□□□□□ -1.74
TOPBP1-201ENST00000260810 GTSF1Q8WW33 167 aa4.16□□□□□ -1.74
TOPBP1-201ENST00000260810 DUX3Q96PT4 197 aa4.16□□□□□ -1.74
TOPBP1-201ENST00000260810 NEU1Q99519 415 aa4.16□□□□□ -1.74
TOPBP1-201ENST00000260810 NXT2Q9NPJ8 142 aaKnown RBP4.16□□□□□ -1.74
TOPBP1-201ENST00000260810 FBXL7Q9UJT9 491 aa4.16□□□□□ -1.74
TOPBP1-201ENST00000260810 FGF8P55075 233 aaPredicted RBP4.16□□□□□ -1.74
TOPBP1-201ENST00000260810 MEF2BQ02080 365 aaPredicted RBP4.16□□□□□ -1.74
TOPBP1-201ENST00000260810 PMS2P11Q13670 270 aa4.16□□□□□ -1.74
TOPBP1-201ENST00000260810 KRTAP24-1Q3LI83 254 aa4.16□□□□□ -1.74
TOPBP1-201ENST00000260810 TMEM144Q7Z5S9 345 aa4.16□□□□□ -1.74
TOPBP1-201ENST00000260810 IGHV3OR16-8A0A075B7F1 116 aa4.15□□□□□ -1.74
TOPBP1-201ENST00000260810 DNAL4O96015 105 aa4.15□□□□□ -1.74
TOPBP1-201ENST00000260810 HLA-DRB1P01911 266 aa4.15□□□□□ -1.74
TOPBP1-201ENST00000260810 FOLR2P14207 255 aa4.15□□□□□ -1.74
TOPBP1-201ENST00000260810 PRNTQ86SH4 94 aa4.15□□□□□ -1.74
TOPBP1-201ENST00000260810 OR2K2Q8NGT1 345 aa4.15□□□□□ -1.74
TOPBP1-201ENST00000260810 ZNF502Q8TBZ5 544 aa4.15□□□□□ -1.74
TOPBP1-201ENST00000260810 WFDC10AQ9H1F0 79 aa4.15□□□□□ -1.74
TOPBP1-201ENST00000260810 A0A1W2PRE2 83 aa4.15□□□□□ -1.74
TOPBP1-201ENST00000260810 TMEM213A2RRL7 107 aa4.15□□□□□ -1.74
TOPBP1-201ENST00000260810 UBE2E1P51965 193 aa4.15□□□□□ -1.74
TOPBP1-201ENST00000260810 PDE6HQ13956 83 aa4.15□□□□□ -1.74
TOPBP1-201ENST00000260810 C1orf194Q5T5A4 169 aa4.15□□□□□ -1.74
TOPBP1-201ENST00000260810 NECAP1Q8NC96 275 aa4.15□□□□□ -1.74
TOPBP1-201ENST00000260810 RND2P52198 227 aa4.15□□□□□ -1.75
TOPBP1-201ENST00000260810 ZNF506Q5JVG8 444 aa4.15□□□□□ -1.75
TOPBP1-201ENST00000260810 TMEM86BQ8N661 226 aa4.15□□□□□ -1.75
TOPBP1-201ENST00000260810 OR4C5Q8NGB2 326 aa4.15□□□□□ -1.75
TOPBP1-201ENST00000260810 PLP1P60201 277 aa4.15□□□□□ -1.75
TOPBP1-201ENST00000260810 MRPL52Q86TS9 123 aaKnown RBP4.15□□□□□ -1.75
TOPBP1-201ENST00000260810 ARL6IP6Q8N6S5 226 aa4.15□□□□□ -1.75
TOPBP1-201ENST00000260810 Q96MF0 132 aa4.15□□□□□ -1.75
TOPBP1-201ENST00000260810 TRGV9Q99603 122 aa4.15□□□□□ -1.75
TOPBP1-201ENST00000260810 NPCDR1Q9BY65 106 aa4.15□□□□□ -1.75
TOPBP1-201ENST00000260810 ZNF324O75467 553 aaPredicted RBP4.14□□□□□ -1.75
TOPBP1-201ENST00000260810 INSP01308 110 aa4.14□□□□□ -1.75
TOPBP1-201ENST00000260810 TCL1AP56279 114 aa4.14□□□□□ -1.75
TOPBP1-201ENST00000260810 C2orf83Q53S99 150 aa4.14□□□□□ -1.75
TOPBP1-201ENST00000260810 TRAV41A0A0B4J266 112 aa4.14□□□□□ -1.75
TOPBP1-201ENST00000260810 UBE2DNLQ8IWF7 75 aa4.14□□□□□ -1.75
TOPBP1-201ENST00000260810 FOXC2Q99958 501 aa4.14□□□□□ -1.75
TOPBP1-201ENST00000260810 TRAV8-6A0A0B4J262 113 aa4.14□□□□□ -1.75
TOPBP1-201ENST00000260810 FABP5P3A8MUU1 101 aa4.14□□□□□ -1.75
TOPBP1-201ENST00000260810 WIPF1O43516 503 aa4.14□□□□□ -1.75
TOPBP1-201ENST00000260810 PAGE4O60829 102 aa4.14□□□□□ -1.75
TOPBP1-201ENST00000260810 TTC32Q5I0X7 151 aa4.14□□□□□ -1.75
TOPBP1-201ENST00000260810 HOXA5P20719 270 aa4.14□□□□□ -1.75
TOPBP1-201ENST00000260810 GCHFRP30047 84 aa4.14□□□□□ -1.75
TOPBP1-201ENST00000260810 FCGR2BP31994 310 aaPredicted RBP4.14□□□□□ -1.75
TOPBP1-201ENST00000260810 ZNF56Q15929 161 aa4.14□□□□□ -1.75
TOPBP1-201ENST00000260810 ACTL10Q5JWF8 245 aa4.14□□□□□ -1.75
TOPBP1-201ENST00000260810 LRRC75A-AS1Q8N1F1 130 aa4.14□□□□□ -1.75
TOPBP1-201ENST00000260810 POM121L12Q8N7R1 296 aa4.14□□□□□ -1.75
TOPBP1-201ENST00000260810 ISOC2Q96AB3 205 aa4.14□□□□□ -1.75
TOPBP1-201ENST00000260810 CHCHD1Q96BP2 118 aaKnown RBP4.14□□□□□ -1.75
TOPBP1-201ENST00000260810 PLEKHB2Q96CS7 222 aa4.14□□□□□ -1.75
TOPBP1-201ENST00000260810 NHP2Q9NX24 153 aaKnown RBP4.14□□□□□ -1.75
TOPBP1-201ENST00000260810 IGHV1-69DA0A0B4J2H0 117 aa4.13□□□□□ -1.75
TOPBP1-201ENST00000260810 IGHV1-69P01742 117 aa4.13□□□□□ -1.75
TOPBP1-201ENST00000260810 FABP2P12104 132 aa4.13□□□□□ -1.75
TOPBP1-201ENST00000260810 CD33P20138 364 aa4.13□□□□□ -1.75
TOPBP1-201ENST00000260810 DEFB136Q30KP8 78 aa4.13□□□□□ -1.75
TOPBP1-201ENST00000260810 SIGLEC15Q6ZMC9 328 aa4.13□□□□□ -1.75
TOPBP1-201ENST00000260810 TTC9CQ8N5M4 171 aa4.13□□□□□ -1.75
TOPBP1-201ENST00000260810 LINC01006Q8NI28 216 aa4.13□□□□□ -1.75
TOPBP1-201ENST00000260810 ST20Q9HBF5 79 aa4.13□□□□□ -1.75
TOPBP1-201ENST00000260810 TRAV40A0A0B4J280 105 aa4.13□□□□□ -1.75
TOPBP1-201ENST00000260810 SRD5A1P18405 259 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms