RNA–Protein interactions for RNA: ENST00000253754.7

PDLIM4-201, Transcript of PDZ and LIM domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM4, Length 2,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-201ENST00000253754 EDN2P20800 178 aa14.22□□□□□ -0.13
PDLIM4-201ENST00000253754 ZNF738Q8NE65 137 aa14.22□□□□□ -0.13
PDLIM4-201ENST00000253754 IGLV1-40P01703 118 aa14.22□□□□□ -0.13
PDLIM4-201ENST00000253754 CKS2P33552 79 aa14.22□□□□□ -0.13
PDLIM4-201ENST00000253754 C9orf47Q6ZRZ4 202 aa14.22□□□□□ -0.13
PDLIM4-201ENST00000253754 KLHDC1Q8N7A1 406 aa14.22□□□□□ -0.13
PDLIM4-201ENST00000253754 MAP1LC3CQ9BXW4 147 aa14.22□□□□□ -0.13
PDLIM4-201ENST00000253754 H3BUA1 57 aa14.21□□□□□ -0.13
PDLIM4-201ENST00000253754 TM4SF20Q53R12 229 aa14.21□□□□□ -0.13
PDLIM4-201ENST00000253754 RNF185Q96GF1 192 aa14.21□□□□□ -0.13
PDLIM4-201ENST00000253754 HNRNPA3P51991 378 aaKnown RBP14.21□□□□□ -0.14
PDLIM4-201ENST00000253754 RPL11P62913 178 aaKnown RBP14.21□□□□□ -0.14
PDLIM4-201ENST00000253754 C10orf99Q6UWK7 81 aa14.21□□□□□ -0.14
PDLIM4-201ENST00000253754 CNFNQ9BYD5 112 aa14.21□□□□□ -0.14
PDLIM4-201ENST00000253754 NPFFR1Q9GZQ6 430 aa14.21□□□□□ -0.14
PDLIM4-201ENST00000253754 HSPB8Q9UJY1 196 aa14.21□□□□□ -0.14
PDLIM4-201ENST00000253754 FSHBP01225 129 aa14.2□□□□□ -0.14
PDLIM4-201ENST00000253754 CFHR3Q02985 330 aa14.2□□□□□ -0.14
PDLIM4-201ENST00000253754 C9orf139Q6ZV77 190 aa14.2□□□□□ -0.14
PDLIM4-201ENST00000253754 TMEM191AQ9H0A3 160 aa14.2□□□□□ -0.14
PDLIM4-201ENST00000253754 SOCS3O14543 225 aa14.2□□□□□ -0.14
PDLIM4-201ENST00000253754 BRI3O95415 125 aa14.2□□□□□ -0.14
PDLIM4-201ENST00000253754 ZNF747Q9BV97 191 aa14.2□□□□□ -0.14
PDLIM4-201ENST00000253754 HIST1H1AQ02539 215 aaPredicted RBP14.19□□□□□ -0.14
PDLIM4-201ENST00000253754 OR10AG1Q8NH19 301 aa14.19□□□□□ -0.14
PDLIM4-201ENST00000253754 FOXC2Q99958 501 aa14.19□□□□□ -0.14
PDLIM4-201ENST00000253754 DMRTA1Q5VZB9 504 aa14.18□□□□□ -0.14
PDLIM4-201ENST00000253754 C20orf202A1L168 122 aa14.18□□□□□ -0.14
PDLIM4-201ENST00000253754 F6UB75 175 aa14.18□□□□□ -0.14
PDLIM4-201ENST00000253754 SRD5A1P18405 259 aa14.18□□□□□ -0.14
PDLIM4-201ENST00000253754 TSPOP30536 169 aa14.18□□□□□ -0.14
PDLIM4-201ENST00000253754 IGHV7-4-1A0A0J9YVY3 117 aa14.17□□□□□ -0.14
PDLIM4-201ENST00000253754 GATA1P15976 413 aaPredicted RBP14.17□□□□□ -0.14
PDLIM4-201ENST00000253754 PET117Q6UWS5 81 aa14.17□□□□□ -0.14
PDLIM4-201ENST00000253754 RHPN1-AS1Q9BWJ2 59 aa14.17□□□□□ -0.14
PDLIM4-201ENST00000253754 EVI2AP22794 236 aa14.17□□□□□ -0.14
PDLIM4-201ENST00000253754 TFPI2P48307 235 aa14.17□□□□□ -0.14
PDLIM4-201ENST00000253754 MTORP42345 2549 aa14.16□□□□□ -0.14
PDLIM4-201ENST00000253754 OR8A1Q8NGG7 326 aa14.16□□□□□ -0.14
PDLIM4-201ENST00000253754 A0A0G2JLM5 398 aa14.16□□□□□ -0.14
PDLIM4-201ENST00000253754 SPRY2O43597 315 aa14.15□□□□□ -0.14
PDLIM4-201ENST00000253754 LAMTOR2Q9Y2Q5 125 aa14.15□□□□□ -0.14
PDLIM4-201ENST00000253754 LINC01545Q5VT33 79 aa14.15□□□□□ -0.14
PDLIM4-201ENST00000253754 HIVEP1P15822 2718 aa14.14□□□□□ -0.15
PDLIM4-201ENST00000253754 KIR3DS1Q14943 382 aa14.14□□□□□ -0.15
PDLIM4-201ENST00000253754 ZFAND2AQ8N6M9 145 aa14.14□□□□□ -0.15
PDLIM4-201ENST00000253754 DAZ1Q9NQZ3 744 aaKnown RBP14.14□□□□□ -0.15
PDLIM4-201ENST00000253754 H3BVH4 76 aa14.13□□□□□ -0.15
PDLIM4-201ENST00000253754 PSMB8P28062 276 aa14.13□□□□□ -0.15
PDLIM4-201ENST00000253754 Q6YL49 198 aa14.13□□□□□ -0.15
PDLIM4-201ENST00000253754 STPG4Q8N801 248 aa14.13□□□□□ -0.15
PDLIM4-201ENST00000253754 OR10J6PQ8NGY7 276 aa14.13□□□□□ -0.15
PDLIM4-201ENST00000253754 PEF1Q9UBV8 284 aaKnown RBP14.13□□□□□ -0.15
PDLIM4-201ENST00000253754 TCF21O43680 179 aa14.13□□□□□ -0.15
PDLIM4-201ENST00000253754 RBX1P62877 108 aa14.13□□□□□ -0.15
PDLIM4-201ENST00000253754 WFDC3Q8IUB2 231 aa14.13□□□□□ -0.15
PDLIM4-201ENST00000253754 TRAV26-2A0A0B4J265 109 aa14.12□□□□□ -0.15
PDLIM4-201ENST00000253754 TNFRSF6BO95407 300 aa14.12□□□□□ -0.15
PDLIM4-201ENST00000253754 HINT1P49773 126 aaPredicted RBP14.12□□□□□ -0.15
PDLIM4-201ENST00000253754 UFC1Q9Y3C8 167 aa14.12□□□□□ -0.15
PDLIM4-201ENST00000253754 ST20Q9HBF5 79 aa14.12□□□□□ -0.15
PDLIM4-201ENST00000253754 OVOL1O14753 267 aa14.11□□□□□ -0.15
PDLIM4-201ENST00000253754 HOXA3O43365 443 aaPredicted RBP14.11□□□□□ -0.15
PDLIM4-201ENST00000253754 HBDP02042 147 aa14.11□□□□□ -0.15
PDLIM4-201ENST00000253754 LINC00477Q96M19 166 aa14.11□□□□□ -0.15
PDLIM4-201ENST00000253754 MAP1LC3AQ9H492 121 aa14.11□□□□□ -0.15
PDLIM4-201ENST00000253754 SMPXQ9UHP9 88 aa14.11□□□□□ -0.15
PDLIM4-201ENST00000253754 VPREB3Q9UKI3 123 aa14.11□□□□□ -0.15
PDLIM4-201ENST00000253754 SPANXN1Q5VSR9 72 aa14.1□□□□□ -0.15
PDLIM4-201ENST00000253754 MRPS16Q9Y3D3 137 aaKnown RBP14.1□□□□□ -0.15
PDLIM4-201ENST00000253754 CYSRT1A8MQ03 144 aa14.1□□□□□ -0.15
PDLIM4-201ENST00000253754 HSBP1L1C9JCN9 74 aa14.1□□□□□ -0.15
PDLIM4-201ENST00000253754 PPBPP02775 128 aa14.1□□□□□ -0.15
PDLIM4-201ENST00000253754 COL5A1-AS1Q5SY13 56 aa14.1□□□□□ -0.15
PDLIM4-201ENST00000253754 LENEPQ9Y5L5 61 aa14.1□□□□□ -0.15
PDLIM4-201ENST00000253754 RNASE4P34096 147 aaKnown RBP14.09□□□□□ -0.15
PDLIM4-201ENST00000253754 DUX5Q96PT3 197 aa14.09□□□□□ -0.15
PDLIM4-201ENST00000253754 NF1P21359 2839 aa14.09□□□□□ -0.15
PDLIM4-201ENST00000253754 SNAI2O43623 268 aa14.08□□□□□ -0.15
PDLIM4-201ENST00000253754 CACNG7P62955 275 aa14.08□□□□□ -0.15
PDLIM4-201ENST00000253754 KRTAP1-1Q07627 177 aa14.08□□□□□ -0.15
PDLIM4-201ENST00000253754 C18orf15Q96N68 181 aa14.08□□□□□ -0.15
PDLIM4-201ENST00000253754 SMR3AQ99954 134 aa14.08□□□□□ -0.15
PDLIM4-201ENST00000253754 SCRT2Q9NQ03 307 aa14.08□□□□□ -0.15
PDLIM4-201ENST00000253754 WFDC12Q8WWY7 111 aa14.08□□□□□ -0.16
PDLIM4-201ENST00000253754 FAM19A4Q96LR4 140 aa14.08□□□□□ -0.16
PDLIM4-201ENST00000253754 TCTAP57738 103 aa14.07□□□□□ -0.16
PDLIM4-201ENST00000253754 MAST4O15021 2626 aa14.07□□□□□ -0.16
PDLIM4-201ENST00000253754 TRAV21A0A0B4J279 112 aa14.07□□□□□ -0.16
PDLIM4-201ENST00000253754 LEPP41159 167 aa14.07□□□□□ -0.16
PDLIM4-201ENST00000253754 CDKN1BP46527 198 aa14.07□□□□□ -0.16
PDLIM4-201ENST00000253754 ANXA2RQ3ZCQ2 193 aa14.07□□□□□ -0.16
PDLIM4-201ENST00000253754 ZNF580Q9UK33 172 aa14.07□□□□□ -0.16
PDLIM4-201ENST00000253754 M0R381 172 aa14.06□□□□□ -0.16
PDLIM4-201ENST00000253754 OR2K2Q8NGT1 345 aa14.06□□□□□ -0.16
PDLIM4-201ENST00000253754 IFI27L1Q96BM0 104 aa14.06□□□□□ -0.16
PDLIM4-201ENST00000253754 YAE1D1Q9NRH1 226 aa14.06□□□□□ -0.16
PDLIM4-201ENST00000253754 IGHV4-4A0A075B6R2 117 aa14.06□□□□□ -0.16
PDLIM4-201ENST00000253754 SLC25A34Q6PIV7 304 aa14.06□□□□□ -0.16
PDLIM4-201ENST00000253754 NRACQ8N912 160 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms