RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 FLI1Q01543 452 aaPredicted RBP9.67□□□□□ -0.86
DDX39A-201ENST00000242776 ERCC8Q13216 396 aa9.67□□□□□ -0.86
DDX39A-201ENST00000242776 VGLL1Q99990 258 aa9.67□□□□□ -0.86
DDX39A-201ENST00000242776 LENEPQ9Y5L5 61 aa9.67□□□□□ -0.86
DDX39A-201ENST00000242776 TRBV7-9A0A0J9YWB2 115 aa9.66□□□□□ -0.86
DDX39A-201ENST00000242776 LINC00862A6NCI5 91 aa9.66□□□□□ -0.86
DDX39A-201ENST00000242776 ZNF705GA8MUZ8 300 aaPredicted RBP9.66□□□□□ -0.86
DDX39A-201ENST00000242776 TSPOP30536 169 aa9.66□□□□□ -0.86
DDX39A-201ENST00000242776 LEPP41159 167 aa9.66□□□□□ -0.86
DDX39A-201ENST00000242776 FAM3BP58499 235 aaPredicted RBP9.66□□□□□ -0.86
DDX39A-201ENST00000242776 KRTAP10-2P60368 255 aa9.66□□□□□ -0.86
DDX39A-201ENST00000242776 TMEM183BQ1AE95 376 aa9.66□□□□□ -0.86
DDX39A-201ENST00000242776 COMMD7Q86VX2 200 aa9.66□□□□□ -0.86
DDX39A-201ENST00000242776 AGPAT4-IT1Q9H0P7 198 aa9.66□□□□□ -0.86
DDX39A-201ENST00000242776 TREM1Q9NP99 234 aa9.66□□□□□ -0.86
DDX39A-201ENST00000242776 ZNF492Q9P255 531 aa9.66□□□□□ -0.86
DDX39A-201ENST00000242776 PSG8Q9UQ74 426 aa9.66□□□□□ -0.86
DDX39A-201ENST00000242776 TRAV8-1A0A0A6YYK1 113 aa9.66□□□□□ -0.86
DDX39A-201ENST00000242776 CEBPGP53567 150 aa9.66□□□□□ -0.86
DDX39A-201ENST00000242776 TAS2R60P59551 318 aa9.66□□□□□ -0.86
DDX39A-201ENST00000242776 UQCC3Q6UW78 93 aa9.66□□□□□ -0.86
DDX39A-201ENST00000242776 PRNTQ86SH4 94 aa9.66□□□□□ -0.86
DDX39A-201ENST00000242776 Q86TA4 180 aa9.66□□□□□ -0.86
DDX39A-201ENST00000242776 LINC00588Q9Y4M8 146 aa9.66□□□□□ -0.86
DDX39A-201ENST00000242776 KLF12Q9Y4X4 402 aa9.66□□□□□ -0.86
DDX39A-201ENST00000242776 TRAV34A0A0B4J273 112 aa9.65□□□□□ -0.87
DDX39A-201ENST00000242776 TRBV6-1A0A0K0K1D8 114 aa9.65□□□□□ -0.87
DDX39A-201ENST00000242776 EPM2AB3EWF7 344 aa9.65□□□□□ -0.87
DDX39A-201ENST00000242776 SRP19P09132 144 aaKnown RBP9.65□□□□□ -0.87
DDX39A-201ENST00000242776 CT45A10P0DMU9 189 aa9.65□□□□□ -0.87
DDX39A-201ENST00000242776 FUSP35637 526 aaKnown RBP eCLIP9.65□□□□□ -0.87
DDX39A-201ENST00000242776 RPL35P42766 123 aaKnown RBP9.65□□□□□ -0.87
DDX39A-201ENST00000242776 Q8TAT8 98 aa9.65□□□□□ -0.87
DDX39A-201ENST00000242776 LINC00479Q96M42 142 aa9.65□□□□□ -0.87
DDX39A-201ENST00000242776 IGLV2-11P01706 119 aa9.64□□□□□ -0.87
DDX39A-201ENST00000242776 INAFM2P0DMQ5 153 aa9.64□□□□□ -0.87
DDX39A-201ENST00000242776 CDKN1BP46527 198 aa9.64□□□□□ -0.87
DDX39A-201ENST00000242776 CCL18P55774 89 aa9.64□□□□□ -0.87
DDX39A-201ENST00000242776 SAPCD1Q5SSQ6 148 aa9.64□□□□□ -0.87
DDX39A-201ENST00000242776 AMTNQ6UX39 209 aa9.64□□□□□ -0.87
DDX39A-201ENST00000242776 SGK494Q96LW2 274 aa9.64□□□□□ -0.87
DDX39A-201ENST00000242776 PARLQ9H300 379 aa9.64□□□□□ -0.87
DDX39A-201ENST00000242776 ZFP30Q9Y2G7 519 aa9.64□□□□□ -0.87
DDX39A-201ENST00000242776 DMBT1Q9UGM3 2413 aaPredicted RBP9.63□□□□□ -0.87
DDX39A-201ENST00000242776 CRISP2P16562 243 aa9.63□□□□□ -0.87
DDX39A-201ENST00000242776 GNG4P50150 75 aa9.63□□□□□ -0.87
DDX39A-201ENST00000242776 SRSF3P84103 164 aaKnown RBP9.63□□□□□ -0.87
DDX39A-201ENST00000242776 ZNF674Q2M3X9 581 aa9.63□□□□□ -0.87
DDX39A-201ENST00000242776 EIF4E3Q8N5X7 224 aaKnown RBP9.63□□□□□ -0.87
DDX39A-201ENST00000242776 DERL1Q9BUN8 251 aa9.63□□□□□ -0.87
DDX39A-201ENST00000242776 M0R2Z0 102 aa9.62□□□□□ -0.87
DDX39A-201ENST00000242776 LTAP01374 205 aa9.62□□□□□ -0.87
DDX39A-201ENST00000242776 SPINK13Q1W4C9 94 aa9.62□□□□□ -0.87
DDX39A-201ENST00000242776 FAM74A3Q4VXF1 159 aa9.62□□□□□ -0.87
DDX39A-201ENST00000242776 SMUG1Q53HV7 270 aa9.62□□□□□ -0.87
DDX39A-201ENST00000242776 BAGE2Q86Y30 109 aa9.62□□□□□ -0.87
DDX39A-201ENST00000242776 SMIM12Q96EX1 92 aa9.62□□□□□ -0.87
DDX39A-201ENST00000242776 FAM19A4Q96LR4 140 aa9.62□□□□□ -0.87
DDX39A-201ENST00000242776 SMIM7Q9BQ49 75 aa9.62□□□□□ -0.87
DDX39A-201ENST00000242776 KRTAP1-5Q9BYS1 174 aa9.62□□□□□ -0.87
DDX39A-201ENST00000242776 ZNF727A8MUV8 499 aa9.61□□□□□ -0.87
DDX39A-201ENST00000242776 C9JCJ5 164 aa9.61□□□□□ -0.87
DDX39A-201ENST00000242776 INSP01308 110 aa9.61□□□□□ -0.87
DDX39A-201ENST00000242776 GPX1P07203 203 aa9.61□□□□□ -0.87
DDX39A-201ENST00000242776 NDUFA5Q16718 116 aa9.61□□□□□ -0.87
DDX39A-201ENST00000242776 CENPWQ5EE01 88 aa9.61□□□□□ -0.87
DDX39A-201ENST00000242776 IGF2BP2-AS1Q96M15 143 aa9.61□□□□□ -0.87
DDX39A-201ENST00000242776 KLLNB2CW77 178 aa9.6□□□□□ -0.87
DDX39A-201ENST00000242776 J3KRW8 73 aa9.6□□□□□ -0.87
DDX39A-201ENST00000242776 SFTA3P0C7M3 94 aa9.6□□□□□ -0.87
DDX39A-201ENST00000242776 HTN1P15515 57 aa9.6□□□□□ -0.87
DDX39A-201ENST00000242776 AZU1P20160 251 aa9.6□□□□□ -0.87
DDX39A-201ENST00000242776 TMEM183AQ8IXX5 376 aa9.6□□□□□ -0.87
DDX39A-201ENST00000242776 C20orf144Q9BQM9 153 aa9.6□□□□□ -0.87
DDX39A-201ENST00000242776 Q9H8V8 135 aa9.6□□□□□ -0.87
DDX39A-201ENST00000242776 BIN3Q9NQY0 253 aa9.6□□□□□ -0.87
DDX39A-201ENST00000242776 C7orf71A4D174 169 aa9.59□□□□□ -0.87
DDX39A-201ENST00000242776 C9JQL5 133 aa9.59□□□□□ -0.87
DDX39A-201ENST00000242776 ZFAND2AQ8N6M9 145 aa9.59□□□□□ -0.87
DDX39A-201ENST00000242776 C8orf49Q96NF6 230 aa9.59□□□□□ -0.87
DDX39A-201ENST00000242776 TRAV12-2A0A075B6T6 113 aa9.59□□□□□ -0.87
DDX39A-201ENST00000242776 LYRM9A8MSI8 78 aa9.59□□□□□ -0.87
DDX39A-201ENST00000242776 GCGP01275 180 aa9.59□□□□□ -0.87
DDX39A-201ENST00000242776 ATP5G1P05496 136 aa9.59□□□□□ -0.87
DDX39A-201ENST00000242776 GFI1BQ5VTD9 330 aa9.59□□□□□ -0.87
DDX39A-201ENST00000242776 TVP23CQ96ET8 276 aa9.59□□□□□ -0.87
DDX39A-201ENST00000242776 LY96Q9Y6Y9 160 aa9.59□□□□□ -0.87
DDX39A-201ENST00000242776 TRAV21A0A0B4J279 112 aa9.58□□□□□ -0.88
DDX39A-201ENST00000242776 MGST1P10620 155 aaKnown RBP9.58□□□□□ -0.88
DDX39A-201ENST00000242776 RNASE4P34096 147 aaKnown RBP9.58□□□□□ -0.88
DDX39A-201ENST00000242776 BTN1A1Q13410 526 aa9.58□□□□□ -0.88
DDX39A-201ENST00000242776 COX8CQ7Z4L0 72 aa9.58□□□□□ -0.88
DDX39A-201ENST00000242776 TMEM256Q8N2U0 113 aa9.58□□□□□ -0.88
DDX39A-201ENST00000242776 NHLRC2Q8NBF2 726 aa9.58□□□□□ -0.88
DDX39A-201ENST00000242776 MLST8Q9BVC4 326 aa9.58□□□□□ -0.88
DDX39A-201ENST00000242776 NAT8Q9UHE5 227 aa9.58□□□□□ -0.88
DDX39A-201ENST00000242776 TRBV20OR9-2A0A075B6H5 130 aa9.57□□□□□ -0.88
DDX39A-201ENST00000242776 TRAV12-3A0A0B4J271 114 aa9.57□□□□□ -0.88
DDX39A-201ENST00000242776 A0A0J9YY99 117 aa9.57□□□□□ -0.88
DDX39A-201ENST00000242776 TMEM218A2RU14 115 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms