RNA–Protein interactions for RNA: ENST00000217315.9

TM9SF4-201, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2 BASIC

Gene TM9SF4, Length 4,032 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-201ENST00000217315 FSTL3O95633 263 aa9.56□□□□□ -0.88
TM9SF4-201ENST00000217315 PCP4P48539 62 aa9.56□□□□□ -0.88
TM9SF4-201ENST00000217315 RAX2Q96IS3 184 aa9.56□□□□□ -0.88
TM9SF4-201ENST00000217315 DUX3Q96PT4 197 aa9.56□□□□□ -0.88
TM9SF4-201ENST00000217315 TMEM238LA0A1B0GVL6 79 aa9.56□□□□□ -0.88
TM9SF4-201ENST00000217315 A6NJY4 79 aa9.56□□□□□ -0.88
TM9SF4-201ENST00000217315 PRSS2P07478 247 aa9.56□□□□□ -0.88
TM9SF4-201ENST00000217315 CD300EQ496F6 205 aaPredicted RBP9.56□□□□□ -0.88
TM9SF4-201ENST00000217315 CSTL1Q9H114 145 aa9.56□□□□□ -0.88
TM9SF4-201ENST00000217315 BOD1L1Q8NFC6 3051 aa9.56□□□□□ -0.88
TM9SF4-201ENST00000217315 COX8AP10176 69 aa9.56□□□□□ -0.88
TM9SF4-201ENST00000217315 CRIP1P50238 77 aa9.56□□□□□ -0.88
TM9SF4-201ENST00000217315 DSCR9P59020 149 aa9.56□□□□□ -0.88
TM9SF4-201ENST00000217315 C11orf71Q6IPW1 123 aa9.56□□□□□ -0.88
TM9SF4-201ENST00000217315 SFTA2Q6UW10 78 aa9.56□□□□□ -0.88
TM9SF4-201ENST00000217315 ABCA12Q86UK0 2595 aa9.56□□□□□ -0.88
TM9SF4-201ENST00000217315 TMEM8BA6NDV4 472 aa9.55□□□□□ -0.88
TM9SF4-201ENST00000217315 LGALS9BQ3B8N2 356 aa9.55□□□□□ -0.88
TM9SF4-201ENST00000217315 LGALS9CQ6DKI2 356 aa9.55□□□□□ -0.88
TM9SF4-201ENST00000217315 SMPXQ9UHP9 88 aa9.55□□□□□ -0.88
TM9SF4-201ENST00000217315 PKD1L2Q7Z442 2459 aa9.55□□□□□ -0.88
TM9SF4-201ENST00000217315 DSCAML1Q8TD84 2053 aa9.55□□□□□ -0.88
TM9SF4-201ENST00000217315 IGLV2-11P01706 119 aa9.55□□□□□ -0.88
TM9SF4-201ENST00000217315 LGALS3P17931 250 aaKnown RBP9.55□□□□□ -0.88
TM9SF4-201ENST00000217315 EMP1P54849 157 aa9.55□□□□□ -0.88
TM9SF4-201ENST00000217315 BEX4Q9NWD9 120 aaPredicted RBP9.55□□□□□ -0.88
TM9SF4-201ENST00000217315 NPIPB6E9PJ23 425 aa9.54□□□□□ -0.88
TM9SF4-201ENST00000217315 LOXL1Q08397 574 aaPredicted RBP9.54□□□□□ -0.88
TM9SF4-201ENST00000217315 Q8N8P6 123 aa9.54□□□□□ -0.88
TM9SF4-201ENST00000217315 LINC01356Q8N9X3 169 aa9.54□□□□□ -0.88
TM9SF4-201ENST00000217315 ZNF48Q96MX3 618 aaPredicted RBP9.54□□□□□ -0.88
TM9SF4-201ENST00000217315 TP73-AS1Q9UF72 201 aa9.54□□□□□ -0.88
TM9SF4-201ENST00000217315 CD5LO43866 347 aa9.54□□□□□ -0.88
TM9SF4-201ENST00000217315 APOMO95445 188 aa9.54□□□□□ -0.88
TM9SF4-201ENST00000217315 SUMO2P61956 95 aaKnown RBP9.54□□□□□ -0.88
TM9SF4-201ENST00000217315 IGHV4-59P01825 116 aa9.54□□□□□ -0.88
TM9SF4-201ENST00000217315 KIR3DS1Q14943 382 aa9.54□□□□□ -0.88
TM9SF4-201ENST00000217315 CCDC140Q96MF4 163 aa9.54□□□□□ -0.88
TM9SF4-201ENST00000217315 TRBV12-3P01733 135 aa9.53□□□□□ -0.88
TM9SF4-201ENST00000217315 ANKRD39Q53RE8 183 aa9.53□□□□□ -0.88
TM9SF4-201ENST00000217315 Q71RC1 249 aaPredicted RBP9.53□□□□□ -0.88
TM9SF4-201ENST00000217315 NEGR1Q7Z3B1 354 aa9.53□□□□□ -0.88
TM9SF4-201ENST00000217315 ARL6IP6Q8N6S5 226 aa9.53□□□□□ -0.88
TM9SF4-201ENST00000217315 SPOCK3Q9BQ16 436 aa9.53□□□□□ -0.88
TM9SF4-201ENST00000217315 TNFRSF18Q9Y5U5 241 aa9.53□□□□□ -0.88
TM9SF4-201ENST00000217315 TRAV12-2A0A075B6T6 113 aa9.53□□□□□ -0.88
TM9SF4-201ENST00000217315 IGHV3-73A0A0B4J1V6 119 aa9.53□□□□□ -0.88
TM9SF4-201ENST00000217315 TRBV6-1A0A0K0K1D8 114 aa9.53□□□□□ -0.88
TM9SF4-201ENST00000217315 DUSP14O95147 198 aaKnown RBP9.53□□□□□ -0.88
TM9SF4-201ENST00000217315 SLC25A16P16260 332 aa9.53□□□□□ -0.88
TM9SF4-201ENST00000217315 PAX2Q02962 417 aa9.53□□□□□ -0.88
TM9SF4-201ENST00000217315 SPINK13Q1W4C9 94 aa9.53□□□□□ -0.88
TM9SF4-201ENST00000217315 BVES-AS1Q5T3Y7 98 aa9.53□□□□□ -0.88
TM9SF4-201ENST00000217315 UNQ9165/PRO28630Q6UXU0 137 aa9.53□□□□□ -0.88
TM9SF4-201ENST00000217315 LINC01587Q99440 93 aa9.53□□□□□ -0.88
TM9SF4-201ENST00000217315 GNRH2O43555 120 aa9.53□□□□□ -0.88
TM9SF4-201ENST00000217315 LINC01559Q495D7 138 aa9.53□□□□□ -0.88
TM9SF4-201ENST00000217315 LYRM7Q5U5X0 104 aa9.53□□□□□ -0.88
TM9SF4-201ENST00000217315 MRPL35Q9NZE8 188 aaKnown RBP9.53□□□□□ -0.88
TM9SF4-201ENST00000217315 ZNF815PA8K554 130 aa9.53□□□□□ -0.88
TM9SF4-201ENST00000217315 LINC01545Q5VT33 79 aa9.53□□□□□ -0.88
TM9SF4-201ENST00000217315 C10orf105Q8TEF2 133 aa9.52□□□□□ -0.89
TM9SF4-201ENST00000217315 MRPL16Q9NX20 251 aaKnown RBP9.52□□□□□ -0.89
TM9SF4-201ENST00000217315 IGHV7-4-1A0A0J9YVY3 117 aa9.52□□□□□ -0.89
TM9SF4-201ENST00000217315 RBAKDNA6NC62 111 aa9.52□□□□□ -0.89
TM9SF4-201ENST00000217315 H7C1H1 209 aa9.52□□□□□ -0.89
TM9SF4-201ENST00000217315 MRGPRG-AS1Q2M3A8 158 aa9.52□□□□□ -0.89
TM9SF4-201ENST00000217315 DEFB112Q30KQ8 113 aa9.52□□□□□ -0.89
TM9SF4-201ENST00000217315 PCP2Q8IVA1 136 aa9.52□□□□□ -0.89
TM9SF4-201ENST00000217315 C2orf66Q6UXQ4 117 aa9.52□□□□□ -0.89
TM9SF4-201ENST00000217315 EBI3Q14213 229 aa9.51□□□□□ -0.89
TM9SF4-201ENST00000217315 MRAP2Q96G30 205 aa9.51□□□□□ -0.89
TM9SF4-201ENST00000217315 AJUBAQ96IF1 538 aa9.51□□□□□ -0.89
TM9SF4-201ENST00000217315 SMIM2Q9BVW6 85 aa9.51□□□□□ -0.89
TM9SF4-201ENST00000217315 A0A1W2PPR1 153 aa9.51□□□□□ -0.89
TM9SF4-201ENST00000217315 CTRLP40313 264 aa9.51□□□□□ -0.89
TM9SF4-201ENST00000217315 CHAC1Q9BUX1 264 aa9.51□□□□□ -0.89
TM9SF4-201ENST00000217315 HIVEP2P31629 2446 aa9.51□□□□□ -0.89
TM9SF4-201ENST00000217315 GATA3P23771 443 aa9.51□□□□□ -0.89
TM9SF4-201ENST00000217315 PLNP26678 52 aa9.51□□□□□ -0.89
TM9SF4-201ENST00000217315 KLK9Q9UKQ9 250 aa9.51□□□□□ -0.89
TM9SF4-201ENST00000217315 COTL1Q14019 142 aa9.5□□□□□ -0.89
TM9SF4-201ENST00000217315 SAMD5Q5TGI4 173 aa9.5□□□□□ -0.89
TM9SF4-201ENST00000217315 C16orf54Q6UWD8 224 aa9.5□□□□□ -0.89
TM9SF4-201ENST00000217315 IGHV3-64A0A075B6Q5 118 aa9.5□□□□□ -0.89
TM9SF4-201ENST00000217315 ZNF876PQ49A33 203 aa9.5□□□□□ -0.89
TM9SF4-201ENST00000217315 PAPPA-AS1Q5QFB9 102 aa9.5□□□□□ -0.89
TM9SF4-201ENST00000217315 VCX2Q9H322 139 aa9.5□□□□□ -0.89
TM9SF4-201ENST00000217315 SMAD5-AS1Q9Y6J3 95 aa9.5□□□□□ -0.89
TM9SF4-201ENST00000217315 PRB1P04280 392 aa9.5□□□□□ -0.89
TM9SF4-201ENST00000217315 DEFB131AP59861 70 aa9.5□□□□□ -0.89
TM9SF4-201ENST00000217315 GAGE1Q13065 139 aa9.5□□□□□ -0.89
TM9SF4-201ENST00000217315 PEMTQ9UBM1 199 aa9.5□□□□□ -0.89
TM9SF4-201ENST00000217315 ZNF462Q96JM2 2506 aa9.49□□□□□ -0.89
TM9SF4-201ENST00000217315 PTPRBP23467 1997 aa9.49□□□□□ -0.89
TM9SF4-201ENST00000217315 VCYO14598 125 aa9.49□□□□□ -0.89
TM9SF4-201ENST00000217315 MRPL53Q96EL3 112 aaKnown RBP9.49□□□□□ -0.89
TM9SF4-201ENST00000217315 MTORP42345 2549 aa9.49□□□□□ -0.89
TM9SF4-201ENST00000217315 TTTY13Q9BZ97 58 aa9.49□□□□□ -0.89
TM9SF4-201ENST00000217315 GEMIN7Q9H840 131 aaKnown RBP9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms