RNA–Protein interactions for RNA: ENST00000040877.1

TARBP1-201, Transcript of TAR (HIV-1) RNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARBP1, Length 5,130 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARBP1-201ENST00000040877 I3L2K1 104 aa18.17■□□□□ 0.5
TARBP1-201ENST00000040877 ZNF493Q6ZR52 646 aa18.17■□□□□ 0.5
TARBP1-201ENST00000040877 TECTAO75443 2155 aa18.16■□□□□ 0.5
TARBP1-201ENST00000040877 CDK2AP2O75956 126 aa18.16■□□□□ 0.5
TARBP1-201ENST00000040877 DYNAPQ8N1N2 210 aa18.16■□□□□ 0.5
TARBP1-201ENST00000040877 LYPD6BQ8NI32 183 aa18.16■□□□□ 0.5
TARBP1-201ENST00000040877 IGHV4-38-2P0DP08 117 aa18.16■□□□□ 0.5
TARBP1-201ENST00000040877 NPYP01303 97 aa18.16■□□□□ 0.5
TARBP1-201ENST00000040877 TRAV26-2A0A0B4J265 109 aa18.15■□□□□ 0.5
TARBP1-201ENST00000040877 K7EIM0 57 aa18.15■□□□□ 0.5
TARBP1-201ENST00000040877 C9orf66Q5T8R8 295 aa18.15■□□□□ 0.5
TARBP1-201ENST00000040877 IGHV1-24A0A0C4DH33 117 aa18.15■□□□□ 0.5
TARBP1-201ENST00000040877 HERVK_113P63121 156 aa18.15■□□□□ 0.5
TARBP1-201ENST00000040877 GAGE6Q13070 117 aa18.15■□□□□ 0.5
TARBP1-201ENST00000040877 ZMAT4Q9H898 229 aa18.15■□□□□ 0.5
TARBP1-201ENST00000040877 DOCK11Q5JSL3 2073 aa18.15■□□□□ 0.5
TARBP1-201ENST00000040877 F8VRH5 84 aa18.15■□□□□ 0.5
TARBP1-201ENST00000040877 PLXNB3Q9ULL4 1909 aa18.14■□□□□ 0.49
TARBP1-201ENST00000040877 C9orf118A6NHY6 69 aa18.14■□□□□ 0.49
TARBP1-201ENST00000040877 WIPF2Q8TF74 440 aaPredicted RBP18.14■□□□□ 0.49
TARBP1-201ENST00000040877 IGLL1P15814 213 aa18.13■□□□□ 0.49
TARBP1-201ENST00000040877 MED13Q9UHV7 2174 aa18.13■□□□□ 0.49
TARBP1-201ENST00000040877 C17orf77Q96MU5 243 aa18.13■□□□□ 0.49
TARBP1-201ENST00000040877 TRAV8-3A0A0A6YYJ7 113 aa18.12■□□□□ 0.49
TARBP1-201ENST00000040877 TMEM89A2RUT3 159 aa18.12■□□□□ 0.49
TARBP1-201ENST00000040877 CDPF1Q6NVV7 123 aa18.12■□□□□ 0.49
TARBP1-201ENST00000040877 K7EP13 123 aa18.12■□□□□ 0.49
TARBP1-201ENST00000040877 ZNF625Q96I27 306 aaPredicted RBP18.12■□□□□ 0.49
TARBP1-201ENST00000040877 LTBP2Q14767 1821 aa18.12■□□□□ 0.49
TARBP1-201ENST00000040877 ACACBO00763 2458 aa18.12■□□□□ 0.49
TARBP1-201ENST00000040877 IGHV3-38A0A0C4DH36 116 aa18.12■□□□□ 0.49
TARBP1-201ENST00000040877 TEX48A0A1B0GUV7 120 aa18.12■□□□□ 0.49
TARBP1-201ENST00000040877 NDUFA12Q9UI09 145 aa18.12■□□□□ 0.49
TARBP1-201ENST00000040877 KIF26AQ9ULI4 1882 aaPredicted RBP18.11■□□□□ 0.49
TARBP1-201ENST00000040877 Q8N9W7 124 aa18.11■□□□□ 0.49
TARBP1-201ENST00000040877 IGKV1-17P01599 117 aa18.11■□□□□ 0.49
TARBP1-201ENST00000040877 VWC2LB2RUY7 222 aa18.11■□□□□ 0.49
TARBP1-201ENST00000040877 IGLV1-47P01700 117 aa18.11■□□□□ 0.49
TARBP1-201ENST00000040877 TRBV20-1A0A075B6N2 111 aa18.1■□□□□ 0.49
TARBP1-201ENST00000040877 C5orf56Q8N8D9 126 aa18.1■□□□□ 0.49
TARBP1-201ENST00000040877 NKAPP1Q8N9T2 125 aa18.1■□□□□ 0.49
TARBP1-201ENST00000040877 AJUBAQ96IF1 538 aa18.1■□□□□ 0.49
TARBP1-201ENST00000040877 CTSGP08311 255 aa18.1■□□□□ 0.49
TARBP1-201ENST00000040877 GP9P14770 177 aa18.1■□□□□ 0.49
TARBP1-201ENST00000040877 EGR2P11161 476 aaPredicted RBP18.09■□□□□ 0.49
TARBP1-201ENST00000040877 IGF2BP2-AS1Q96M15 143 aa18.09■□□□□ 0.49
TARBP1-201ENST00000040877 HLA-DMBP28068 263 aa18.09■□□□□ 0.49
TARBP1-201ENST00000040877 PTPRQQ9UMZ3 2332 aa18.09■□□□□ 0.49
TARBP1-201ENST00000040877 F6UB75 175 aa18.09■□□□□ 0.49
TARBP1-201ENST00000040877 C9JAW5 83 aa18.08■□□□□ 0.49
TARBP1-201ENST00000040877 MRPL35Q9NZE8 188 aaKnown RBP18.08■□□□□ 0.49
TARBP1-201ENST00000040877 PRB1P04280 392 aa18.08■□□□□ 0.49
TARBP1-201ENST00000040877 BLCAPP62952 87 aa18.08■□□□□ 0.49
TARBP1-201ENST00000040877 U3KQE9 123 aa18.08■□□□□ 0.48
TARBP1-201ENST00000040877 K7EN84 100 aa18.08■□□□□ 0.48
TARBP1-201ENST00000040877 PFN2P35080 140 aa18.08■□□□□ 0.48
TARBP1-201ENST00000040877 K7EMT4 169 aa18.07■□□□□ 0.48
TARBP1-201ENST00000040877 CRYGCP07315 174 aa18.07■□□□□ 0.48
TARBP1-201ENST00000040877 C16orf54Q6UWD8 224 aa18.07■□□□□ 0.48
TARBP1-201ENST00000040877 ETDBQ3ZM63 59 aa18.07■□□□□ 0.48
TARBP1-201ENST00000040877 K7EP34 96 aa18.07■□□□□ 0.48
TARBP1-201ENST00000040877 COX8AP10176 69 aa18.07■□□□□ 0.48
TARBP1-201ENST00000040877 TAL2Q16559 108 aa18.07■□□□□ 0.48
TARBP1-201ENST00000040877 CFHR4Q92496 578 aa18.06■□□□□ 0.48
TARBP1-201ENST00000040877 ANGP03950 147 aaKnown RBP18.06■□□□□ 0.48
TARBP1-201ENST00000040877 INAFM2P0DMQ5 153 aa18.06■□□□□ 0.48
TARBP1-201ENST00000040877 NOP10Q9NPE3 64 aaKnown RBP18.06■□□□□ 0.48
TARBP1-201ENST00000040877 GNRH2O43555 120 aa18.05■□□□□ 0.48
TARBP1-201ENST00000040877 BUB3O43684 328 aa18.05■□□□□ 0.48
TARBP1-201ENST00000040877 DEFB136Q30KP8 78 aa18.05■□□□□ 0.48
TARBP1-201ENST00000040877 Q8NA96 180 aa18.05■□□□□ 0.48
TARBP1-201ENST00000040877 ZNF48Q96MX3 618 aaPredicted RBP18.05■□□□□ 0.48
TARBP1-201ENST00000040877 C2orf16Q68DN1 1984 aa18.05■□□□□ 0.48
TARBP1-201ENST00000040877 SLURP1P55000 103 aa18.05■□□□□ 0.48
TARBP1-201ENST00000040877 KLF5Q13887 457 aaPredicted RBP18.05■□□□□ 0.48
TARBP1-201ENST00000040877 BOD1L2Q8IYS8 172 aa18.04■□□□□ 0.48
TARBP1-201ENST00000040877 H3BMM0 161 aa18.04■□□□□ 0.48
TARBP1-201ENST00000040877 C16orf74Q96GX8 76 aa18.04■□□□□ 0.48
TARBP1-201ENST00000040877 HIST1H4AP62805 103 aaKnown RBP18.03■□□□□ 0.48
TARBP1-201ENST00000040877 EDA2RQ9HAV5 297 aa18.03■□□□□ 0.48
TARBP1-201ENST00000040877 TRAV25A0A0B4J276 109 aa18.03■□□□□ 0.48
TARBP1-201ENST00000040877 J3QQQ9 107 aa18.03■□□□□ 0.48
TARBP1-201ENST00000040877 BVES-AS1Q5T3Y7 98 aa18.03■□□□□ 0.48
TARBP1-201ENST00000040877 PRO3102Q9H379 93 aa18.03■□□□□ 0.48
TARBP1-201ENST00000040877 F8W1H4 67 aa18.02■□□□□ 0.48
TARBP1-201ENST00000040877 IGLV2-23P01705 113 aa18.02■□□□□ 0.48
TARBP1-201ENST00000040877 Q8N7P7 452 aa18.02■□□□□ 0.48
TARBP1-201ENST00000040877 SH2D6Q7Z4S9 175 aa18.02■□□□□ 0.48
TARBP1-201ENST00000040877 RITA1Q96K30 269 aa18.02■□□□□ 0.48
TARBP1-201ENST00000040877 SIRPDQ9H106 197 aa18.02■□□□□ 0.47
TARBP1-201ENST00000040877 SPANXA1Q9NS26 97 aa18.02■□□□□ 0.47
TARBP1-201ENST00000040877 WI2-2373I1.2A0A1W2PRP0 233 aa18.01■□□□□ 0.47
TARBP1-201ENST00000040877 IGHG2P01859 326 aa18.01■□□□□ 0.47
TARBP1-201ENST00000040877 GPHB5Q86YW7 130 aa18.01■□□□□ 0.47
TARBP1-201ENST00000040877 EML6Q6ZMW3 1958 aa18.01■□□□□ 0.47
TARBP1-201ENST00000040877 TRAV13-2A0A0B4J235 113 aa18.01■□□□□ 0.47
TARBP1-201ENST00000040877 ZFP36P26651 326 aaKnown RBP18.01■□□□□ 0.47
TARBP1-201ENST00000040877 PATE2Q6UY27 113 aa18.01■□□□□ 0.47
TARBP1-201ENST00000040877 TEX22C9J3V5 150 aa18■□□□□ 0.47
TARBP1-201ENST00000040877 SIVA1O15304 175 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms