RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 TFPI2P48307 235 aa12.49□□□□□ -0.41
PHGDH-216ENST00000641375 UBE2V1Q13404 147 aa12.49□□□□□ -0.41
PHGDH-216ENST00000641375 VAMP8Q9BV40 100 aa12.49□□□□□ -0.41
PHGDH-216ENST00000641375 TMEM213A2RRL7 107 aa12.48□□□□□ -0.41
PHGDH-216ENST00000641375 PRAC2D3DTV9 90 aa12.48□□□□□ -0.41
PHGDH-216ENST00000641375 SOCS3O14543 225 aa12.48□□□□□ -0.41
PHGDH-216ENST00000641375 SPINK4O60575 86 aa12.48□□□□□ -0.41
PHGDH-216ENST00000641375 FAM162BQ5T6X4 162 aa12.48□□□□□ -0.41
PHGDH-216ENST00000641375 Q71RC1 249 aaPredicted RBP12.48□□□□□ -0.41
PHGDH-216ENST00000641375 C4orf3Q8WVX3 66 aa12.48□□□□□ -0.41
PHGDH-216ENST00000641375 ASCL2Q99929 193 aa12.48□□□□□ -0.41
PHGDH-216ENST00000641375 SNURFLB1AK76 121 aa12.47□□□□□ -0.41
PHGDH-216ENST00000641375 CBLN1P23435 193 aa12.47□□□□□ -0.41
PHGDH-216ENST00000641375 CRIP1P50238 77 aa12.47□□□□□ -0.41
PHGDH-216ENST00000641375 TMEM78Q5T7P6 136 aa12.47□□□□□ -0.41
PHGDH-216ENST00000641375 ATP5L2Q7Z4Y8 100 aa12.47□□□□□ -0.41
PHGDH-216ENST00000641375 Q8TAT8 98 aa12.47□□□□□ -0.41
PHGDH-216ENST00000641375 ESDP10768 282 aa12.47□□□□□ -0.41
PHGDH-216ENST00000641375 SYNJ2BPP57105 145 aa12.47□□□□□ -0.41
PHGDH-216ENST00000641375 MRPL54Q6P161 138 aaKnown RBP12.47□□□□□ -0.41
PHGDH-216ENST00000641375 C9orf47Q6ZRZ4 202 aa12.47□□□□□ -0.41
PHGDH-216ENST00000641375 TCF24Q7RTU0 167 aa12.47□□□□□ -0.41
PHGDH-216ENST00000641375 WIPF2Q8TF74 440 aaPredicted RBP12.47□□□□□ -0.41
PHGDH-216ENST00000641375 WFDC12Q8WWY7 111 aa12.47□□□□□ -0.41
PHGDH-216ENST00000641375 ALKBH7Q9BT30 221 aaPredicted RBP12.47□□□□□ -0.41
PHGDH-216ENST00000641375 HILS1P60008 231 aa12.46□□□□□ -0.41
PHGDH-216ENST00000641375 ERCC8Q13216 396 aa12.46□□□□□ -0.41
PHGDH-216ENST00000641375 ZNF738Q8NE65 137 aa12.46□□□□□ -0.41
PHGDH-216ENST00000641375 SMR3AQ99954 134 aa12.46□□□□□ -0.41
PHGDH-216ENST00000641375 MRPL18Q9H0U6 180 aaKnown RBP12.46□□□□□ -0.41
PHGDH-216ENST00000641375 LY6G6DO95868 133 aa12.46□□□□□ -0.42
PHGDH-216ENST00000641375 HLA-DQA1P01909 254 aa12.46□□□□□ -0.42
PHGDH-216ENST00000641375 NOTCH2Q04721 2471 aa12.46□□□□□ -0.42
PHGDH-216ENST00000641375 TCTEX1D4Q5JR98 221 aa12.46□□□□□ -0.42
PHGDH-216ENST00000641375 RBPMS2Q6ZRY4 209 aaKnown RBP12.46□□□□□ -0.42
PHGDH-216ENST00000641375 TMEM256Q8N2U0 113 aa12.46□□□□□ -0.42
PHGDH-216ENST00000641375 ANK3Q12955 4377 aaKnown RBP12.46□□□□□ -0.42
PHGDH-216ENST00000641375 HIVEP2P31629 2446 aa12.45□□□□□ -0.42
PHGDH-216ENST00000641375 LINC01619G3V211 115 aa12.45□□□□□ -0.42
PHGDH-216ENST00000641375 CIDEAO60543 219 aa12.45□□□□□ -0.42
PHGDH-216ENST00000641375 ZNF138P52744 262 aa12.45□□□□□ -0.42
PHGDH-216ENST00000641375 KLF5Q13887 457 aaPredicted RBP12.45□□□□□ -0.42
PHGDH-216ENST00000641375 KHDC1LQ5JSQ8 128 aa12.45□□□□□ -0.42
PHGDH-216ENST00000641375 GTSF1Q8WW33 167 aa12.45□□□□□ -0.42
PHGDH-216ENST00000641375 AGPAT4-IT1Q9H0P7 198 aa12.45□□□□□ -0.42
PHGDH-216ENST00000641375 C16orf95Q9H693 158 aa12.45□□□□□ -0.42
PHGDH-216ENST00000641375 PAM16Q9Y3D7 125 aa12.45□□□□□ -0.42
PHGDH-216ENST00000641375 OVOL1O14753 267 aa12.45□□□□□ -0.42
PHGDH-216ENST00000641375 SH2D1AO60880 128 aa12.45□□□□□ -0.42
PHGDH-216ENST00000641375 ID1P41134 155 aa12.45□□□□□ -0.42
PHGDH-216ENST00000641375 FOXA3P55318 350 aaPredicted RBP12.45□□□□□ -0.42
PHGDH-216ENST00000641375 TDRG1Q3Y452 100 aa12.45□□□□□ -0.42
PHGDH-216ENST00000641375 TMEM136Q6ZRR5 245 aa12.45□□□□□ -0.42
PHGDH-216ENST00000641375 Q6ZWC4 215 aa12.45□□□□□ -0.42
PHGDH-216ENST00000641375 C20orf173Q96LM9 149 aa12.45□□□□□ -0.42
PHGDH-216ENST00000641375 JMJD8Q96S16 334 aa12.45□□□□□ -0.42
PHGDH-216ENST00000641375 OTOGQ6ZRI0 2925 aa12.44□□□□□ -0.42
PHGDH-216ENST00000641375 FRMD6-AS1P0C7T7 363 aa12.44□□□□□ -0.42
PHGDH-216ENST00000641375 EDN2P20800 178 aa12.44□□□□□ -0.42
PHGDH-216ENST00000641375 Q6AWC8 147 aa12.44□□□□□ -0.42
PHGDH-216ENST00000641375 STPG4Q8N801 248 aa12.44□□□□□ -0.42
PHGDH-216ENST00000641375 DPF1Q92782 380 aa12.44□□□□□ -0.42
PHGDH-216ENST00000641375 LENEPQ9Y5L5 61 aa12.44□□□□□ -0.42
PHGDH-216ENST00000641375 MTORP42345 2549 aa12.44□□□□□ -0.42
PHGDH-216ENST00000641375 IGKV3-7A0A075B6H7 116 aa12.43□□□□□ -0.42
PHGDH-216ENST00000641375 M0QZ24 198 aa12.43□□□□□ -0.42
PHGDH-216ENST00000641375 NUPR1O60356 82 aa12.43□□□□□ -0.42
PHGDH-216ENST00000641375 OR11H1Q8NG94 326 aa12.43□□□□□ -0.42
PHGDH-216ENST00000641375 OR10J6PQ8NGY7 276 aa12.43□□□□□ -0.42
PHGDH-216ENST00000641375 NF1P21359 2839 aa12.43□□□□□ -0.42
PHGDH-216ENST00000641375 TMEM189A5PLL7 270 aa12.43□□□□□ -0.42
PHGDH-216ENST00000641375 FABP5P3A8MUU1 101 aa12.43□□□□□ -0.42
PHGDH-216ENST00000641375 RPS20P60866 119 aaKnown RBP12.43□□□□□ -0.42
PHGDH-216ENST00000641375 C18orf65Q6ZTR6 163 aa12.43□□□□□ -0.42
PHGDH-216ENST00000641375 KLHL30-AS1Q8NEE0 82 aa12.43□□□□□ -0.42
PHGDH-216ENST00000641375 DCANP1Q8TF63 244 aa12.43□□□□□ -0.42
PHGDH-216ENST00000641375 PGLYRP4Q96LB8 373 aa12.43□□□□□ -0.42
PHGDH-216ENST00000641375 LINC00477Q96M19 166 aa12.43□□□□□ -0.42
PHGDH-216ENST00000641375 UQCR10Q9UDW1 63 aa12.43□□□□□ -0.42
PHGDH-216ENST00000641375 C2orf70A6NJV1 201 aa12.42□□□□□ -0.42
PHGDH-216ENST00000641375 HSBP1L1C9JCN9 74 aa12.42□□□□□ -0.42
PHGDH-216ENST00000641375 SRSF2Q01130 221 aaKnown RBP12.42□□□□□ -0.42
PHGDH-216ENST00000641375 DEFB136Q30KP8 78 aa12.42□□□□□ -0.42
PHGDH-216ENST00000641375 OR1N2Q8NGR9 330 aa12.42□□□□□ -0.42
PHGDH-216ENST00000641375 CUBNO60494 3623 aa12.42□□□□□ -0.42
PHGDH-216ENST00000641375 A0A1B0GXF2 115 aa12.42□□□□□ -0.42
PHGDH-216ENST00000641375 HBBP68871 147 aa12.42□□□□□ -0.42
PHGDH-216ENST00000641375 PEMTQ9UBM1 199 aa12.42□□□□□ -0.42
PHGDH-216ENST00000641375 COX11Q9Y6N1 276 aa12.42□□□□□ -0.42
PHGDH-216ENST00000641375 CTRLP40313 264 aa12.41□□□□□ -0.42
PHGDH-216ENST00000641375 ZNF80P51504 273 aaPredicted RBP12.41□□□□□ -0.42
PHGDH-216ENST00000641375 SLURP1P55000 103 aa12.41□□□□□ -0.42
PHGDH-216ENST00000641375 LINC01006Q8NI28 216 aa12.41□□□□□ -0.42
PHGDH-216ENST00000641375 LAMTOR2Q9Y2Q5 125 aa12.41□□□□□ -0.42
PHGDH-216ENST00000641375 MS4A6AQ9H2W1 248 aa12.4□□□□□ -0.42
PHGDH-216ENST00000641375 TMEM238LA0A1B0GVL6 79 aa12.4□□□□□ -0.42
PHGDH-216ENST00000641375 CAMPP49913 170 aa12.4□□□□□ -0.42
PHGDH-216ENST00000641375 APCSP02743 223 aa12.39□□□□□ -0.43
PHGDH-216ENST00000641375 RNF151Q2KHN1 245 aa12.39□□□□□ -0.43
PHGDH-216ENST00000641375 A0A1B0GUT8 65 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms