RNA–Protein interactions for RNA: ENST00000638029.1

CACNA1A-258, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-258ENST00000638029 A0A1B0GTI1 187 aa13.2□□□□□ -0.3
CACNA1A-258ENST00000638029 LINC01549A6NIU2 74 aa13.2□□□□□ -0.3
CACNA1A-258ENST00000638029 DEFB4AO15263 64 aa13.2□□□□□ -0.3
CACNA1A-258ENST00000638029 ZC2HC1BQ5TFG8 222 aa13.2□□□□□ -0.3
CACNA1A-258ENST00000638029 CCL24O00175 119 aa13.2□□□□□ -0.3
CACNA1A-258ENST00000638029 RNF138Q8WVD3 245 aa13.2□□□□□ -0.3
CACNA1A-258ENST00000638029 DUX4L9Q6RFH8 374 aaPredicted RBP13.19□□□□□ -0.3
CACNA1A-258ENST00000638029 K7ERJ3 54 aa13.19□□□□□ -0.3
CACNA1A-258ENST00000638029 FGFBP3Q8TAT2 258 aa13.19□□□□□ -0.3
CACNA1A-258ENST00000638029 WIPF2Q8TF74 440 aaPredicted RBP13.19□□□□□ -0.3
CACNA1A-258ENST00000638029 CFHR4Q92496 578 aa13.19□□□□□ -0.3
CACNA1A-258ENST00000638029 C9orf118A6NHY6 69 aa13.19□□□□□ -0.3
CACNA1A-258ENST00000638029 ZNF106Q9H2Y7 1883 aaKnown RBP13.19□□□□□ -0.3
CACNA1A-258ENST00000638029 I3L3M4 83 aa13.19□□□□□ -0.3
CACNA1A-258ENST00000638029 MLANAQ16655 118 aa13.19□□□□□ -0.3
CACNA1A-258ENST00000638029 WFDC11Q8NEX6 87 aa13.19□□□□□ -0.3
CACNA1A-258ENST00000638029 ATP6V0E1O15342 81 aa13.18□□□□□ -0.3
CACNA1A-258ENST00000638029 PYY3Q5JQD4 70 aa13.18□□□□□ -0.3
CACNA1A-258ENST00000638029 SLC25A48Q6ZT89 311 aaKnown RBP13.18□□□□□ -0.3
CACNA1A-258ENST00000638029 G3V318 75 aa13.18□□□□□ -0.3
CACNA1A-258ENST00000638029 SMIM20Q8N5G0 67 aa13.18□□□□□ -0.3
CACNA1A-258ENST00000638029 A0A0A6YYD4 124 aa13.18□□□□□ -0.3
CACNA1A-258ENST00000638029 H3BMG7 143 aa13.18□□□□□ -0.3
CACNA1A-258ENST00000638029 CD59P13987 128 aa13.18□□□□□ -0.3
CACNA1A-258ENST00000638029 CTSGP08311 255 aa13.18□□□□□ -0.3
CACNA1A-258ENST00000638029 LINC00479Q96M42 142 aa13.18□□□□□ -0.3
CACNA1A-258ENST00000638029 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.18□□□□□ -0.3
CACNA1A-258ENST00000638029 MRPL23Q16540 153 aaKnown RBP13.18□□□□□ -0.3
CACNA1A-258ENST00000638029 K7EMI3 77 aa13.17□□□□□ -0.3
CACNA1A-258ENST00000638029 IL18BPO95998 194 aa13.17□□□□□ -0.3
CACNA1A-258ENST00000638029 LINC00114Q6XXX2 140 aa13.17□□□□□ -0.3
CACNA1A-258ENST00000638029 PPDPFLQ8WWR9 84 aa13.17□□□□□ -0.3
CACNA1A-258ENST00000638029 NCOR1P1Q9H4R4 102 aa13.17□□□□□ -0.3
CACNA1A-258ENST00000638029 TMEM213A2RRL7 107 aa13.17□□□□□ -0.3
CACNA1A-258ENST00000638029 F8W1H4 67 aa13.17□□□□□ -0.3
CACNA1A-258ENST00000638029 KLK5Q9Y337 293 aaPredicted RBP13.17□□□□□ -0.3
CACNA1A-258ENST00000638029 IGLV3-12A0A075B6K2 115 aa13.17□□□□□ -0.3
CACNA1A-258ENST00000638029 COLCA2A8K830 154 aa13.17□□□□□ -0.3
CACNA1A-258ENST00000638029 K7EP13 123 aa13.17□□□□□ -0.3
CACNA1A-258ENST00000638029 FAM104BQ5XKR9 115 aa13.17□□□□□ -0.3
CACNA1A-258ENST00000638029 POU2AF1Q16633 256 aa13.16□□□□□ -0.3
CACNA1A-258ENST00000638029 CASC2Q6XLA1 102 aa13.16□□□□□ -0.3
CACNA1A-258ENST00000638029 DENND4CQ5VZ89 1909 aa13.16□□□□□ -0.3
CACNA1A-258ENST00000638029 M0R1W7 72 aa13.16□□□□□ -0.3
CACNA1A-258ENST00000638029 PAQR4Q8N4S7 273 aaPredicted RBP13.16□□□□□ -0.3
CACNA1A-258ENST00000638029 E7EQL1 145 aa13.16□□□□□ -0.3
CACNA1A-258ENST00000638029 APRG1Q8IVJ8 170 aa13.16□□□□□ -0.3
CACNA1A-258ENST00000638029 CACNA1HO95180 2353 aa13.16□□□□□ -0.3
CACNA1A-258ENST00000638029 TRGV9Q99603 122 aa13.15□□□□□ -0.3
CACNA1A-258ENST00000638029 NCR3O14931 201 aa13.15□□□□□ -0.3
CACNA1A-258ENST00000638029 ZFP36L1Q07352 338 aaKnown RBP13.15□□□□□ -0.3
CACNA1A-258ENST00000638029 ETDBQ3ZM63 59 aa13.15□□□□□ -0.3
CACNA1A-258ENST00000638029 PIFOQ8TCI5 191 aa13.15□□□□□ -0.3
CACNA1A-258ENST00000638029 MESP1Q9BRJ9 268 aa13.15□□□□□ -0.3
CACNA1A-258ENST00000638029 LINC01559Q495D7 138 aa13.15□□□□□ -0.3
CACNA1A-258ENST00000638029 NUP210Q8TEM1 1887 aaPredicted RBP13.14□□□□□ -0.31
CACNA1A-258ENST00000638029 A0A087WV48 116 aa13.14□□□□□ -0.31
CACNA1A-258ENST00000638029 SHISA3A0PJX4 238 aa13.14□□□□□ -0.31
CACNA1A-258ENST00000638029 CT83Q5H943 113 aa13.14□□□□□ -0.31
CACNA1A-258ENST00000638029 C9orf139Q6ZV77 190 aa13.14□□□□□ -0.31
CACNA1A-258ENST00000638029 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.14□□□□□ -0.31
CACNA1A-258ENST00000638029 IGKV2-29A2NJV5 120 aaPredicted RBP13.14□□□□□ -0.31
CACNA1A-258ENST00000638029 COX7B2Q8TF08 81 aa13.14□□□□□ -0.31
CACNA1A-258ENST00000638029 KIAA1671Q9BY89 1806 aa13.14□□□□□ -0.31
CACNA1A-258ENST00000638029 POLR3KQ9Y2Y1 108 aaPredicted RBP13.14□□□□□ -0.31
CACNA1A-258ENST00000638029 CARD19Q96LW7 228 aa13.14□□□□□ -0.31
CACNA1A-258ENST00000638029 REG4Q9BYZ8 158 aa13.14□□□□□ -0.31
CACNA1A-258ENST00000638029 HGFACQ04756 655 aa13.14□□□□□ -0.31
CACNA1A-258ENST00000638029 IGKV1-9A0A0C4DH69 117 aa13.13□□□□□ -0.31
CACNA1A-258ENST00000638029 CEND1Q8N111 149 aa13.13□□□□□ -0.31
CACNA1A-258ENST00000638029 A0A0J9YWU9 116 aa13.13□□□□□ -0.31
CACNA1A-258ENST00000638029 SLAQ13239 276 aa13.13□□□□□ -0.31
CACNA1A-258ENST00000638029 PROP1O75360 226 aa13.13□□□□□ -0.31
CACNA1A-258ENST00000638029 IGHV1OR15-1A0A075B7D0 117 aa13.13□□□□□ -0.31
CACNA1A-258ENST00000638029 A0A1B0GWJ7 208 aa13.13□□□□□ -0.31
CACNA1A-258ENST00000638029 C5orf38Q86SI9 138 aa13.13□□□□□ -0.31
CACNA1A-258ENST00000638029 H0YJW9 148 aa13.13□□□□□ -0.31
CACNA1A-258ENST00000638029 NOTCH4Q99466 2003 aa13.13□□□□□ -0.31
CACNA1A-258ENST00000638029 TREML4Q6UXN2 200 aa13.13□□□□□ -0.31
CACNA1A-258ENST00000638029 C8orf86Q6ZUL3 223 aa13.13□□□□□ -0.31
CACNA1A-258ENST00000638029 NDUFB1O75438 58 aa13.12□□□□□ -0.31
CACNA1A-258ENST00000638029 ZFP36P26651 326 aaKnown RBP13.12□□□□□ -0.31
CACNA1A-258ENST00000638029 NPBQ8NG41 125 aa13.12□□□□□ -0.31
CACNA1A-258ENST00000638029 TEX36Q5VZQ5 186 aa13.12□□□□□ -0.31
CACNA1A-258ENST00000638029 GGNQ86UU5 652 aa13.12□□□□□ -0.31
CACNA1A-258ENST00000638029 ORMDL1Q9P0S3 153 aa13.12□□□□□ -0.31
CACNA1A-258ENST00000638029 ARTNQ5T4W7 220 aa13.12□□□□□ -0.31
CACNA1A-258ENST00000638029 SRRM5B3KS81 715 aa13.12□□□□□ -0.31
CACNA1A-258ENST00000638029 IGHV4-59P01825 116 aa13.12□□□□□ -0.31
CACNA1A-258ENST00000638029 IGHV1-69DA0A0B4J2H0 117 aa13.12□□□□□ -0.31
CACNA1A-258ENST00000638029 IGKV3D-7A0A0C4DH55 119 aa13.12□□□□□ -0.31
CACNA1A-258ENST00000638029 IGHV1-69P01742 117 aa13.12□□□□□ -0.31
CACNA1A-258ENST00000638029 UTF1Q5T230 341 aa13.12□□□□□ -0.31
CACNA1A-258ENST00000638029 IGLV3-32A0A0A0MS00 114 aa13.11□□□□□ -0.31
CACNA1A-258ENST00000638029 CD177Q8N6Q3 437 aa13.11□□□□□ -0.31
CACNA1A-258ENST00000638029 IGKV1-27A0A075B6S5 117 aa13.11□□□□□ -0.31
CACNA1A-258ENST00000638029 FOXE3Q13461 319 aa13.11□□□□□ -0.31
CACNA1A-258ENST00000638029 CAMK2N2Q96S95 79 aa13.11□□□□□ -0.31
CACNA1A-258ENST00000638029 F6UB75 175 aa13.11□□□□□ -0.31
CACNA1A-258ENST00000638029 A0A1W2PPM0 123 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms