RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 SSX7Q7RTT5 188 aa12.31□□□□□ -0.44
PNKP-230ENST00000638016 LYPD1Q8N2G4 141 aa12.31□□□□□ -0.44
PNKP-230ENST00000638016 OR10G4Q8NGN3 311 aa12.31□□□□□ -0.44
PNKP-230ENST00000638016 OR10G9Q8NGN4 311 aa12.31□□□□□ -0.44
PNKP-230ENST00000638016 OR10G7Q8NGN6 311 aa12.31□□□□□ -0.44
PNKP-230ENST00000638016 RXFP4Q8TDU9 374 aa12.31□□□□□ -0.44
PNKP-230ENST00000638016 AQP10Q96PS8 301 aa12.31□□□□□ -0.44
PNKP-230ENST00000638016 SH3BGRL3Q9H299 93 aa12.31□□□□□ -0.44
PNKP-230ENST00000638016 OTORQ9NRC9 128 aa12.31□□□□□ -0.44
PNKP-230ENST00000638016 TRGV2A0A075B6R0 118 aa12.3□□□□□ -0.44
PNKP-230ENST00000638016 TRAV8-1A0A0A6YYK1 113 aa12.3□□□□□ -0.44
PNKP-230ENST00000638016 A0A1W2PPV4 95 aa12.3□□□□□ -0.44
PNKP-230ENST00000638016 RBAKDNA6NC62 111 aa12.3□□□□□ -0.44
PNKP-230ENST00000638016 SPINK4O60575 86 aa12.3□□□□□ -0.44
PNKP-230ENST00000638016 ARL14EPLP0DKL9 152 aa12.3□□□□□ -0.44
PNKP-230ENST00000638016 ATP6V0CP27449 155 aa12.3□□□□□ -0.44
PNKP-230ENST00000638016 ZNF266Q14584 549 aa12.3□□□□□ -0.44
PNKP-230ENST00000638016 VSIG2Q96IQ7 327 aa12.3□□□□□ -0.44
PNKP-230ENST00000638016 CCL18P55774 89 aa12.29□□□□□ -0.44
PNKP-230ENST00000638016 GOLT1AQ6ZVE7 132 aa12.29□□□□□ -0.44
PNKP-230ENST00000638016 TVP23CQ96ET8 276 aa12.29□□□□□ -0.44
PNKP-230ENST00000638016 SGK494Q96LW2 274 aa12.29□□□□□ -0.44
PNKP-230ENST00000638016 ARPC5LQ9BPX5 153 aa12.29□□□□□ -0.44
PNKP-230ENST00000638016 MDFICQ9P1T7 246 aa12.29□□□□□ -0.44
PNKP-230ENST00000638016 NBDYA0A0U1RRE5 68 aa12.28□□□□□ -0.44
PNKP-230ENST00000638016 RNF222A6NCQ9 220 aa12.28□□□□□ -0.44
PNKP-230ENST00000638016 F6UZH7 168 aa12.28□□□□□ -0.44
PNKP-230ENST00000638016 GIPP09681 153 aaPredicted RBP12.28□□□□□ -0.44
PNKP-230ENST00000638016 CDC34P49427 236 aaPredicted RBP12.28□□□□□ -0.44
PNKP-230ENST00000638016 FAM3BP58499 235 aaPredicted RBP12.28□□□□□ -0.44
PNKP-230ENST00000638016 ESRGQ1W209 222 aa12.28□□□□□ -0.44
PNKP-230ENST00000638016 IBA57Q5T440 356 aaKnown RBP12.28□□□□□ -0.44
PNKP-230ENST00000638016 C1orf134Q5TEV5 83 aa12.28□□□□□ -0.44
PNKP-230ENST00000638016 PQLC2Q6ZP29 291 aa12.28□□□□□ -0.44
PNKP-230ENST00000638016 FXYD6-FXYD2A0A087WZ82 144 aa12.27□□□□□ -0.45
PNKP-230ENST00000638016 TRBV7-9A0A0J9YWB2 115 aa12.27□□□□□ -0.45
PNKP-230ENST00000638016 G3V3Q6 166 aa12.27□□□□□ -0.45
PNKP-230ENST00000638016 OR2G3Q8NGZ4 309 aa12.27□□□□□ -0.45
PNKP-230ENST00000638016 CMTM2Q8TAZ6 248 aa12.27□□□□□ -0.45
PNKP-230ENST00000638016 RAB24Q969Q5 203 aa12.27□□□□□ -0.45
PNKP-230ENST00000638016 KRTAP1-5Q9BYS1 174 aa12.27□□□□□ -0.45
PNKP-230ENST00000638016 NAGKQ9UJ70 344 aa12.27□□□□□ -0.45
PNKP-230ENST00000638016 A0A096LPF7 62 aa12.26□□□□□ -0.45
PNKP-230ENST00000638016 STAG3L2P0CL84 134 aa12.26□□□□□ -0.45
PNKP-230ENST00000638016 STAG3L3P0CL85 134 aa12.26□□□□□ -0.45
PNKP-230ENST00000638016 TMEM183BQ1AE95 376 aa12.26□□□□□ -0.45
PNKP-230ENST00000638016 Q6AWC8 147 aa12.26□□□□□ -0.45
PNKP-230ENST00000638016 RPL7L1Q6DKI1 246 aaKnown RBP12.26□□□□□ -0.45
PNKP-230ENST00000638016 TMEM183AQ8IXX5 376 aa12.26□□□□□ -0.45
PNKP-230ENST00000638016 C18orf15Q96N68 181 aa12.26□□□□□ -0.45
PNKP-230ENST00000638016 GCHFRP30047 84 aa12.25□□□□□ -0.45
PNKP-230ENST00000638016 TNP2Q05952 138 aa12.25□□□□□ -0.45
PNKP-230ENST00000638016 ZNF415Q09FC8 603 aa12.25□□□□□ -0.45
PNKP-230ENST00000638016 ST6GAL2Q96JF0 529 aa12.25□□□□□ -0.45
PNKP-230ENST00000638016 PSMG3Q9BT73 122 aaPredicted RBP12.25□□□□□ -0.45
PNKP-230ENST00000638016 SFTA3P0C7M3 94 aa12.24□□□□□ -0.45
PNKP-230ENST00000638016 OR2T35Q8NGX2 323 aa12.24□□□□□ -0.45
PNKP-230ENST00000638016 Q9H8V8 135 aa12.24□□□□□ -0.45
PNKP-230ENST00000638016 TNFSF18Q9UNG2 199 aa12.24□□□□□ -0.45
PNKP-230ENST00000638016 H3BNG1 76 aa12.23□□□□□ -0.45
PNKP-230ENST00000638016 GNRH2O43555 120 aa12.23□□□□□ -0.45
PNKP-230ENST00000638016 ZNF726P1Q15940 193 aa12.23□□□□□ -0.45
PNKP-230ENST00000638016 FAM74A1Q5RGS3 127 aa12.23□□□□□ -0.45
PNKP-230ENST00000638016 ZNF575Q86XF7 245 aa12.23□□□□□ -0.45
PNKP-230ENST00000638016 TMED6Q8WW62 240 aa12.23□□□□□ -0.45
PNKP-230ENST00000638016 LENEPQ9Y5L5 61 aa12.23□□□□□ -0.45
PNKP-230ENST00000638016 GGTLC3B5MD39 225 aa12.22□□□□□ -0.45
PNKP-230ENST00000638016 SMLR1H3BR10 107 aa12.22□□□□□ -0.45
PNKP-230ENST00000638016 SOHLH1Q5JUK2 328 aa12.22□□□□□ -0.45
PNKP-230ENST00000638016 C6orf223Q8N319 242 aa12.22□□□□□ -0.45
PNKP-230ENST00000638016 C8orf49Q96NF6 230 aa12.22□□□□□ -0.45
PNKP-230ENST00000638016 TREM1Q9NP99 234 aa12.22□□□□□ -0.45
PNKP-230ENST00000638016 PAX4O43316 350 aa12.21□□□□□ -0.45
PNKP-230ENST00000638016 FHL2Q14192 279 aa12.21□□□□□ -0.45
PNKP-230ENST00000638016 RGS21Q2M5E4 152 aa12.21□□□□□ -0.45
PNKP-230ENST00000638016 FAM159AQ6UWV7 190 aa12.21□□□□□ -0.45
PNKP-230ENST00000638016 INO80EQ8NBZ0 244 aaPredicted RBP12.21□□□□□ -0.45
PNKP-230ENST00000638016 SUN5Q8TC36 379 aa12.21□□□□□ -0.45
PNKP-230ENST00000638016 ZNF479Q96JC4 524 aa12.21□□□□□ -0.45
PNKP-230ENST00000638016 MRPS16Q9Y3D3 137 aaKnown RBP12.21□□□□□ -0.45
PNKP-230ENST00000638016 LRP1BQ9NZR2 4599 aa12.21□□□□□ -0.45
PNKP-230ENST00000638016 RYR1P21817 5038 aa12.2□□□□□ -0.46
PNKP-230ENST00000638016 TCRAP04437 139 aa12.2□□□□□ -0.46
PNKP-230ENST00000638016 TYMSP04818 313 aa12.2□□□□□ -0.46
PNKP-230ENST00000638016 ZNF80P51504 273 aaPredicted RBP12.2□□□□□ -0.46
PNKP-230ENST00000638016 SERF2P84101 59 aa12.2□□□□□ -0.46
PNKP-230ENST00000638016 IQCF2Q8IXL9 164 aa12.2□□□□□ -0.46
PNKP-230ENST00000638016 UPK3BQ9BT76 320 aa12.2□□□□□ -0.46
PNKP-230ENST00000638016 C11orf21Q9P2W6 132 aa12.2□□□□□ -0.46
PNKP-230ENST00000638016 TRGV11A0A075B6L2 103 aa12.19□□□□□ -0.46
PNKP-230ENST00000638016 IGHV3-16A0A0C4DH30 117 aa12.19□□□□□ -0.46
PNKP-230ENST00000638016 IGLV2-11P01706 119 aa12.19□□□□□ -0.46
PNKP-230ENST00000638016 CRYBA4P53673 196 aa12.19□□□□□ -0.46
PNKP-230ENST00000638016 SUMO1P63165 101 aaKnown RBP12.19□□□□□ -0.46
PNKP-230ENST00000638016 TMEM75Q8N9X5 138 aa12.19□□□□□ -0.46
PNKP-230ENST00000638016 C5orf17Q8NAS9 161 aa12.19□□□□□ -0.46
PNKP-230ENST00000638016 ASB13Q8WXK3 278 aa12.19□□□□□ -0.46
PNKP-230ENST00000638016 ACTR3CQ9C0K3 210 aaPredicted RBP12.19□□□□□ -0.46
PNKP-230ENST00000638016 TRAV21A0A0B4J279 112 aa12.18□□□□□ -0.46
PNKP-230ENST00000638016 ARPC5O15511 151 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 167 ms