RNA–Protein interactions for RNA: ENST00000629912.1

NEK3-211, Transcript of NIMA related kinase 3, humanhuman

TSL 5 BASIC

Gene NEK3, Length 141 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-211ENST00000629912 ZANQ9Y493 2812 aa4.2□□□□□ -1.74
NEK3-211ENST00000629912 TMSB15BA0A087X1C1 80 aa4.2□□□□□ -1.74
NEK3-211ENST00000629912 TMEM213A2RRL7 107 aa4.2□□□□□ -1.74
NEK3-211ENST00000629912 CD5LO43866 347 aa4.2□□□□□ -1.74
NEK3-211ENST00000629912 SCGB1D1O95968 90 aa4.2□□□□□ -1.74
NEK3-211ENST00000629912 OR5AL1P0C617 328 aa4.2□□□□□ -1.74
NEK3-211ENST00000629912 LINC00614P0C842 121 aa4.2□□□□□ -1.74
NEK3-211ENST00000629912 PRB4P10163 310 aaPredicted RBP4.2□□□□□ -1.74
NEK3-211ENST00000629912 NTF3P20783 257 aa4.2□□□□□ -1.74
NEK3-211ENST00000629912 AMTP48728 403 aa4.2□□□□□ -1.74
NEK3-211ENST00000629912 ZNF664Q8N3J9 261 aa4.2□□□□□ -1.74
NEK3-211ENST00000629912 OR8A1Q8NGG7 326 aa4.2□□□□□ -1.74
NEK3-211ENST00000629912 DCANP1Q8TF63 244 aa4.2□□□□□ -1.74
NEK3-211ENST00000629912 TMEM191AQ9H0A3 160 aa4.2□□□□□ -1.74
NEK3-211ENST00000629912 C11orf21Q9P2W6 132 aa4.2□□□□□ -1.74
NEK3-211ENST00000629912 PDZD2O15018 2839 aa4.19□□□□□ -1.74
NEK3-211ENST00000629912 ANK3Q12955 4377 aaKnown RBP4.19□□□□□ -1.74
NEK3-211ENST00000629912 IGHV4OR15-8A0A075B7B6 117 aa4.19□□□□□ -1.74
NEK3-211ENST00000629912 A0A087WW49 117 aa4.19□□□□□ -1.74
NEK3-211ENST00000629912 TRAV2A0A0B4J234 112 aa4.19□□□□□ -1.74
NEK3-211ENST00000629912 TRAV21A0A0B4J279 112 aa4.19□□□□□ -1.74
NEK3-211ENST00000629912 LINC00587B1AMM8 73 aa4.19□□□□□ -1.74
NEK3-211ENST00000629912 K7EQG2 157 aa4.19□□□□□ -1.74
NEK3-211ENST00000629912 SNAI2O43623 268 aa4.19□□□□□ -1.74
NEK3-211ENST00000629912 HSBP1O75506 76 aa4.19□□□□□ -1.74
NEK3-211ENST00000629912 PPBPP02775 128 aa4.19□□□□□ -1.74
NEK3-211ENST00000629912 MED14OSP0DP75 135 aa4.19□□□□□ -1.74
NEK3-211ENST00000629912 RPL11P62913 178 aaKnown RBP4.19□□□□□ -1.74
NEK3-211ENST00000629912 CACNG7P62955 275 aa4.19□□□□□ -1.74
NEK3-211ENST00000629912 KRTAP1-1Q07627 177 aa4.19□□□□□ -1.74
NEK3-211ENST00000629912 TWIST1Q15672 202 aa4.19□□□□□ -1.74
NEK3-211ENST00000629912 MRPL51Q4U2R6 128 aaKnown RBP4.19□□□□□ -1.74
NEK3-211ENST00000629912 HIST2H2BCQ6DN03 193 aa4.19□□□□□ -1.74
NEK3-211ENST00000629912 TEX43Q6ZNM6 134 aa4.19□□□□□ -1.74
NEK3-211ENST00000629912 ZFAND2AQ8N6M9 145 aa4.19□□□□□ -1.74
NEK3-211ENST00000629912 KLHDC1Q8N7A1 406 aa4.19□□□□□ -1.74
NEK3-211ENST00000629912 Q8N976 141 aa4.19□□□□□ -1.74
NEK3-211ENST00000629912 ODF3Q96PU9 254 aa4.19□□□□□ -1.74
NEK3-211ENST00000629912 MS4A6AQ9H2W1 248 aa4.19□□□□□ -1.74
NEK3-211ENST00000629912 TMEM160Q9NX00 188 aa4.19□□□□□ -1.74
NEK3-211ENST00000629912 TENM4Q6N022 2769 aa4.19□□□□□ -1.74
NEK3-211ENST00000629912 ITPR3Q14573 2671 aa4.18□□□□□ -1.74
NEK3-211ENST00000629912 C2orf70A6NJV1 201 aa4.18□□□□□ -1.74
NEK3-211ENST00000629912 KLLNB2CW77 178 aa4.18□□□□□ -1.74
NEK3-211ENST00000629912 LINC01619G3V211 115 aa4.18□□□□□ -1.74
NEK3-211ENST00000629912 TSTD3H0UI37 97 aa4.18□□□□□ -1.74
NEK3-211ENST00000629912 M0R2Z0 102 aa4.18□□□□□ -1.74
NEK3-211ENST00000629912 C3orf79P0CE67 100 aa4.18□□□□□ -1.74
NEK3-211ENST00000629912 ZNF705DP0CH99 300 aaPredicted RBP4.18□□□□□ -1.74
NEK3-211ENST00000629912 ZNF705BP0CI00 300 aaPredicted RBP4.18□□□□□ -1.74
NEK3-211ENST00000629912 CD33P20138 364 aa4.18□□□□□ -1.74
NEK3-211ENST00000629912 HOXD3P31249 432 aaPredicted RBP4.18□□□□□ -1.74
NEK3-211ENST00000629912 SYNJ2BPP57105 145 aa4.18□□□□□ -1.74
NEK3-211ENST00000629912 SCGB2A2Q13296 93 aa4.18□□□□□ -1.74
NEK3-211ENST00000629912 TCTEX1D4Q5JR98 221 aa4.18□□□□□ -1.74
NEK3-211ENST00000629912 RNASEKQ6P5S7 137 aaKnown RBP4.18□□□□□ -1.74
NEK3-211ENST00000629912 Q6ZSV7 163 aa4.18□□□□□ -1.74
NEK3-211ENST00000629912 ORMDL3Q8N138 153 aa4.18□□□□□ -1.74
NEK3-211ENST00000629912 FAM19A2Q8N3H0 131 aa4.18□□□□□ -1.74
NEK3-211ENST00000629912 DEFB125Q8N687 156 aa4.18□□□□□ -1.74
NEK3-211ENST00000629912 C4orf3Q8WVX3 66 aa4.18□□□□□ -1.74
NEK3-211ENST00000629912 RNF185Q96GF1 192 aa4.18□□□□□ -1.74
NEK3-211ENST00000629912 TPPP3Q9BW30 176 aa4.18□□□□□ -1.74
NEK3-211ENST00000629912 C16orf95Q9H693 158 aa4.18□□□□□ -1.74
NEK3-211ENST00000629912 LAMTOR2Q9Y2Q5 125 aa4.18□□□□□ -1.74
NEK3-211ENST00000629912 CREBBPQ92793 2442 aa4.18□□□□□ -1.74
NEK3-211ENST00000629912 FAM181BA6NEQ2 426 aa4.17□□□□□ -1.74
NEK3-211ENST00000629912 LINC01546A6NGU7 62 aa4.17□□□□□ -1.74
NEK3-211ENST00000629912 DNAJC9-AS1A6NH13 148 aa4.17□□□□□ -1.74
NEK3-211ENST00000629912 PRSS47A8MTI9 375 aa4.17□□□□□ -1.74
NEK3-211ENST00000629912 M0QZ24 198 aa4.17□□□□□ -1.74
NEK3-211ENST00000629912 CRXO43186 299 aaPredicted RBP4.17□□□□□ -1.74
NEK3-211ENST00000629912 DUSP14O95147 198 aaKnown RBP4.17□□□□□ -1.74
NEK3-211ENST00000629912 SRD5A1P18405 259 aa4.17□□□□□ -1.74
NEK3-211ENST00000629912 BTF3P20290 206 aaKnown RBP4.17□□□□□ -1.74
NEK3-211ENST00000629912 EDN2P20800 178 aa4.17□□□□□ -1.74
NEK3-211ENST00000629912 CKS2P33552 79 aa4.17□□□□□ -1.74
NEK3-211ENST00000629912 KRTDAPP60985 99 aa4.17□□□□□ -1.74
NEK3-211ENST00000629912 SNRPD3P62318 126 aaKnown RBP4.17□□□□□ -1.74
NEK3-211ENST00000629912 PMCHL1Q16048 86 aa4.17□□□□□ -1.74
NEK3-211ENST00000629912 PRR9Q5T870 116 aa4.17□□□□□ -1.74
NEK3-211ENST00000629912 EBLN2Q6P2I7 272 aa4.17□□□□□ -1.74
NEK3-211ENST00000629912 ADAMTSL5Q6ZMM2 481 aa4.17□□□□□ -1.74
NEK3-211ENST00000629912 AMN1Q8IY45 258 aa4.17□□□□□ -1.74
NEK3-211ENST00000629912 OR1N2Q8NGR9 330 aa4.17□□□□□ -1.74
NEK3-211ENST00000629912 PRSS3P2Q8NHM4 247 aa4.17□□□□□ -1.74
NEK3-211ENST00000629912 DPF1Q92782 380 aa4.17□□□□□ -1.74
NEK3-211ENST00000629912 PRELID3AQ96N28 172 aa4.17□□□□□ -1.74
NEK3-211ENST00000629912 C20orf144Q9BQM9 153 aa4.17□□□□□ -1.74
NEK3-211ENST00000629912 PRO1933Q9H354 126 aa4.17□□□□□ -1.74
NEK3-211ENST00000629912 SCRT2Q9NQ03 307 aa4.17□□□□□ -1.74
NEK3-211ENST00000629912 YAE1D1Q9NRH1 226 aa4.17□□□□□ -1.74
NEK3-211ENST00000629912 MSRB1Q9NZV6 116 aa4.17□□□□□ -1.74
NEK3-211ENST00000629912 PEMTQ9UBM1 199 aa4.17□□□□□ -1.74
NEK3-211ENST00000629912 RNF114Q9Y508 228 aa4.17□□□□□ -1.74
NEK3-211ENST00000629912 CSMD2Q7Z408 3487 aa4.16□□□□□ -1.74
NEK3-211ENST00000629912 IGKV3-7A0A075B6H7 116 aa4.16□□□□□ -1.74
NEK3-211ENST00000629912 NBPF19A0A087WUL8 3843 aa4.16□□□□□ -1.74
NEK3-211ENST00000629912 IGHV1-24A0A0C4DH33 117 aa4.16□□□□□ -1.74
NEK3-211ENST00000629912 KIR2DL5BA0A0G2JN68 375 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms