RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 GRIFINA4D1Z8 144 aa3.64□□□□□ -1.83
LINC00550-201ENST00000629293 FCN1O00602 326 aa3.64□□□□□ -1.83
LINC00550-201ENST00000629293 PEX7O00628 323 aa3.64□□□□□ -1.83
LINC00550-201ENST00000629293 NBR2O15453 112 aa3.64□□□□□ -1.83
LINC00550-201ENST00000629293 TRGV3P03979 118 aa3.64□□□□□ -1.83
LINC00550-201ENST00000629293 REG1AP05451 166 aa3.64□□□□□ -1.83
LINC00550-201ENST00000629293 RPL27AP46776 148 aaKnown RBP3.64□□□□□ -1.83
LINC00550-201ENST00000629293 EBI3Q14213 229 aa3.64□□□□□ -1.83
LINC00550-201ENST00000629293 IQCJQ1A5X6 159 aa3.64□□□□□ -1.83
LINC00550-201ENST00000629293 C5orf64Q2M2E5 130 aa3.64□□□□□ -1.83
LINC00550-201ENST00000629293 KIR2DL5AQ8N109 375 aa3.64□□□□□ -1.83
LINC00550-201ENST00000629293 CMTM2Q8TAZ6 248 aa3.64□□□□□ -1.83
LINC00550-201ENST00000629293 F11RQ9Y624 299 aaKnown RBP3.64□□□□□ -1.83
LINC00550-201ENST00000629293 HYDINQ4G0P3 5121 aa3.64□□□□□ -1.83
LINC00550-201ENST00000629293 SNURFLB1AK76 121 aa3.64□□□□□ -1.83
LINC00550-201ENST00000629293 CORTO00230 105 aa3.64□□□□□ -1.83
LINC00550-201ENST00000629293 SERF1AO75920 110 aa3.64□□□□□ -1.83
LINC00550-201ENST00000629293 CNIH1O95406 144 aa3.64□□□□□ -1.83
LINC00550-201ENST00000629293 IGHV3-48P01763 117 aa3.64□□□□□ -1.83
LINC00550-201ENST00000629293 CRISP2P16562 243 aa3.64□□□□□ -1.83
LINC00550-201ENST00000629293 SYNJ2BPP57105 145 aa3.64□□□□□ -1.83
LINC00550-201ENST00000629293 FXYD3Q14802 87 aa3.64□□□□□ -1.83
LINC00550-201ENST00000629293 IBA57Q5T440 356 aaKnown RBP3.64□□□□□ -1.83
LINC00550-201ENST00000629293 STXBP6Q8NFX7 210 aa3.64□□□□□ -1.83
LINC00550-201ENST00000629293 SMIM12Q96EX1 92 aa3.64□□□□□ -1.83
LINC00550-201ENST00000629293 RNF5Q99942 180 aa3.64□□□□□ -1.83
LINC00550-201ENST00000629293 KLF12Q9Y4X4 402 aa3.64□□□□□ -1.83
LINC00550-201ENST00000629293 IZUMO1RA6ND01 250 aa3.64□□□□□ -1.83
LINC00550-201ENST00000629293 F2Z2F3 143 aa3.64□□□□□ -1.83
LINC00550-201ENST00000629293 IGF1P05019 195 aa3.64□□□□□ -1.83
LINC00550-201ENST00000629293 PAFAH1B2P68402 229 aa3.64□□□□□ -1.83
LINC00550-201ENST00000629293 TNXAQ16473 311 aa3.64□□□□□ -1.83
LINC00550-201ENST00000629293 TMEM183BQ1AE95 376 aa3.64□□□□□ -1.83
LINC00550-201ENST00000629293 RASL11AQ6T310 242 aa3.64□□□□□ -1.83
LINC00550-201ENST00000629293 C19orf35Q6ZS72 473 aa3.64□□□□□ -1.83
LINC00550-201ENST00000629293 LINC00305Q7Z4B0 112 aa3.64□□□□□ -1.83
LINC00550-201ENST00000629293 LINC00479Q96M42 142 aa3.64□□□□□ -1.83
LINC00550-201ENST00000629293 NDUFAF3Q9BU61 184 aa3.64□□□□□ -1.83
LINC00550-201ENST00000629293 I3L2K1 104 aa3.63□□□□□ -1.83
LINC00550-201ENST00000629293 LY6G6CO95867 125 aa3.63□□□□□ -1.83
LINC00550-201ENST00000629293 LGALS1P09382 135 aaKnown RBP3.63□□□□□ -1.83
LINC00550-201ENST00000629293 RANP62826 216 aaKnown RBP3.63□□□□□ -1.83
LINC00550-201ENST00000629293 OR10J3Q5JRS4 329 aa3.63□□□□□ -1.83
LINC00550-201ENST00000629293 GTSCR1Q86UQ5 136 aa3.63□□□□□ -1.83
LINC00550-201ENST00000629293 PPP1R27Q86WC6 154 aa3.63□□□□□ -1.83
LINC00550-201ENST00000629293 KRTAP4-12Q9BQ66 201 aa3.63□□□□□ -1.83
LINC00550-201ENST00000629293 KRTAP4-7Q9BYR0 210 aa3.63□□□□□ -1.83
LINC00550-201ENST00000629293 NAGKQ9UJ70 344 aa3.63□□□□□ -1.83
LINC00550-201ENST00000629293 BMPR1BO00238 502 aa3.63□□□□□ -1.83
LINC00550-201ENST00000629293 BRI3O95415 125 aa3.63□□□□□ -1.83
LINC00550-201ENST00000629293 HLA-DQA1P01909 254 aa3.63□□□□□ -1.83
LINC00550-201ENST00000629293 IGLC1P0CG04 106 aa3.63□□□□□ -1.83
LINC00550-201ENST00000629293 PIK3CD-AS1Q5SR53 167 aa3.63□□□□□ -1.83
LINC00550-201ENST00000629293 C1orf194Q5T5A4 169 aa3.63□□□□□ -1.83
LINC00550-201ENST00000629293 TEX43Q6ZNM6 134 aa3.63□□□□□ -1.83
LINC00550-201ENST00000629293 LINC00469Q8N7U9 141 aa3.63□□□□□ -1.83
LINC00550-201ENST00000629293 WFDC10AQ9H1F0 79 aa3.63□□□□□ -1.83
LINC00550-201ENST00000629293 EDA2RQ9HAV5 297 aa3.63□□□□□ -1.83
LINC00550-201ENST00000629293 TMEM14CQ9P0S9 112 aa3.63□□□□□ -1.83
LINC00550-201ENST00000629293 EPDR1Q9UM22 224 aa3.63□□□□□ -1.83
LINC00550-201ENST00000629293 A0A1B0GXF2 115 aa3.63□□□□□ -1.83
LINC00550-201ENST00000629293 ZNF705GA8MUZ8 300 aaPredicted RBP3.63□□□□□ -1.83
LINC00550-201ENST00000629293 HYPMO75409 117 aa3.63□□□□□ -1.83
LINC00550-201ENST00000629293 HLA-DRB1P01911 266 aa3.63□□□□□ -1.83
LINC00550-201ENST00000629293 CSN3P07498 182 aa3.63□□□□□ -1.83
LINC00550-201ENST00000629293 MGST1P10620 155 aaKnown RBP3.63□□□□□ -1.83
LINC00550-201ENST00000629293 TCL1AP56279 114 aa3.63□□□□□ -1.83
LINC00550-201ENST00000629293 GNG5P63218 68 aa3.63□□□□□ -1.83
LINC00550-201ENST00000629293 RPL19P84098 196 aaKnown RBP3.63□□□□□ -1.83
LINC00550-201ENST00000629293 SRSF12Q8WXF0 261 aaKnown RBP3.63□□□□□ -1.83
LINC00550-201ENST00000629293 TMEM190Q8WZ59 177 aa3.63□□□□□ -1.83
LINC00550-201ENST00000629293 TM2D3Q9BRN9 247 aa3.63□□□□□ -1.83
LINC00550-201ENST00000629293 C2orf88Q9BSF0 95 aa3.63□□□□□ -1.83
LINC00550-201ENST00000629293 RHODO00212 210 aa3.62□□□□□ -1.83
LINC00550-201ENST00000629293 NDUFA3O95167 84 aa3.62□□□□□ -1.83
LINC00550-201ENST00000629293 TOMM40O96008 361 aa3.62□□□□□ -1.83
LINC00550-201ENST00000629293 CA1P00915 261 aaPredicted RBP3.62□□□□□ -1.83
LINC00550-201ENST00000629293 LTAP01374 205 aa3.62□□□□□ -1.83
LINC00550-201ENST00000629293 GDF5OSQ5U4N7 250 aa3.62□□□□□ -1.83
LINC00550-201ENST00000629293 BAGE2Q86Y30 109 aa3.62□□□□□ -1.83
LINC00550-201ENST00000629293 Q8N976 141 aa3.62□□□□□ -1.83
LINC00550-201ENST00000629293 OR1B1Q8NGR6 318 aa3.62□□□□□ -1.83
LINC00550-201ENST00000629293 ATG101Q9BSB4 218 aa3.62□□□□□ -1.83
LINC00550-201ENST00000629293 ZNF492Q9P255 531 aa3.62□□□□□ -1.83
LINC00550-201ENST00000629293 NAT8BQ9UHF3 227 aa3.62□□□□□ -1.83
LINC00550-201ENST00000629293 TRBV6-1A0A0K0K1D8 114 aa3.62□□□□□ -1.83
LINC00550-201ENST00000629293 C19orf71A6NCJ1 209 aa3.62□□□□□ -1.83
LINC00550-201ENST00000629293 K7EIM0 57 aa3.62□□□□□ -1.83
LINC00550-201ENST00000629293 OR2J3O76001 311 aa3.62□□□□□ -1.83
LINC00550-201ENST00000629293 IGKV1-17P01599 117 aa3.62□□□□□ -1.83
LINC00550-201ENST00000629293 NBEAP1P0C6P0 100 aa3.62□□□□□ -1.83
LINC00550-201ENST00000629293 ORM2P19652 201 aa3.62□□□□□ -1.83
LINC00550-201ENST00000629293 C5orf17Q8NAS9 161 aa3.62□□□□□ -1.83
LINC00550-201ENST00000629293 NUP35Q8NFH5 326 aa3.62□□□□□ -1.83
LINC00550-201ENST00000629293 NPBQ8NG41 125 aa3.62□□□□□ -1.83
LINC00550-201ENST00000629293 TSKUQ8WUA8 353 aa3.62□□□□□ -1.83
LINC00550-201ENST00000629293 FMC1Q96HJ9 113 aa3.62□□□□□ -1.83
LINC00550-201ENST00000629293 KCNS1Q96KK3 526 aa3.62□□□□□ -1.83
LINC00550-201ENST00000629293 CHRDL1Q9BU40 450 aa3.62□□□□□ -1.83
LINC00550-201ENST00000629293 MRPL27Q9P0M9 148 aaKnown RBP3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms