RNA–Protein interactions for RNA: ENST00000626109.1

LINC00538-201, long intergenic non-protein coding RNA 538, humanhuman

BASIC

Gene LINC00538, Length 1,906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00538-201ENST00000626109 NPFFO15130 113 aa9.01□□□□□ -0.97
LINC00538-201ENST00000626109 BUB3O43684 328 aa9.01□□□□□ -0.97
LINC00538-201ENST00000626109 IGLV1-47P01700 117 aa9.01□□□□□ -0.97
LINC00538-201ENST00000626109 HLA-DQA1P01909 254 aa9.01□□□□□ -0.97
LINC00538-201ENST00000626109 UBE2L3P68036 154 aaKnown RBP9.01□□□□□ -0.97
LINC00538-201ENST00000626109 KLF17Q5JT82 389 aaPredicted RBP9.01□□□□□ -0.97
LINC00538-201ENST00000626109 GTSF1LQ9H1H1 148 aa9.01□□□□□ -0.97
LINC00538-201ENST00000626109 ABCA1O95477 2261 aa9.01□□□□□ -0.97
LINC00538-201ENST00000626109 TCRBV4S1A1TA0A5B7 111 aa9□□□□□ -0.97
LINC00538-201ENST00000626109 FABP5P3A8MUU1 101 aa9□□□□□ -0.97
LINC00538-201ENST00000626109 FSHBP01225 129 aa9□□□□□ -0.97
LINC00538-201ENST00000626109 MGST1P10620 155 aaKnown RBP9□□□□□ -0.97
LINC00538-201ENST00000626109 GATA2P23769 480 aaPredicted RBP9□□□□□ -0.97
LINC00538-201ENST00000626109 MINOS1Q5TGZ0 78 aa9□□□□□ -0.97
LINC00538-201ENST00000626109 RUSC1-AS1Q66K80 236 aa9□□□□□ -0.97
LINC00538-201ENST00000626109 RASL11AQ6T310 242 aa9□□□□□ -0.97
LINC00538-201ENST00000626109 Q6ZWC4 215 aa9□□□□□ -0.97
LINC00538-201ENST00000626109 SIGLECL1Q8N7X8 197 aa9□□□□□ -0.97
LINC00538-201ENST00000626109 TEX45Q8NA69 505 aa9□□□□□ -0.97
LINC00538-201ENST00000626109 SPATA3Q8NHX4 192 aa9□□□□□ -0.97
LINC00538-201ENST00000626109 TMEM101Q96IK0 257 aa9□□□□□ -0.97
LINC00538-201ENST00000626109 PAXXQ9BUH6 204 aa9□□□□□ -0.97
LINC00538-201ENST00000626109 SERTAD4Q9NUC0 356 aa9□□□□□ -0.97
LINC00538-201ENST00000626109 ZNRD1Q9P1U0 126 aa9□□□□□ -0.97
LINC00538-201ENST00000626109 MINOS1-NBL1R4GNA1 71 aa9□□□□□ -0.97
LINC00538-201ENST00000626109 MAP1AP78559 2803 aaPredicted RBP9□□□□□ -0.97
LINC00538-201ENST00000626109 TET2Q6N021 2002 aaPredicted RBP9□□□□□ -0.97
LINC00538-201ENST00000626109 SMIM27A0A1W2PRY6 76 aa8.99□□□□□ -0.97
LINC00538-201ENST00000626109 GGTLC3B5MD39 225 aa8.99□□□□□ -0.97
LINC00538-201ENST00000626109 SMKR1H3BMG3 65 aa8.99□□□□□ -0.97
LINC00538-201ENST00000626109 BUB1B-PAK6H3BSN5 160 aa8.99□□□□□ -0.97
LINC00538-201ENST00000626109 NUPR1O60356 82 aa8.99□□□□□ -0.97
LINC00538-201ENST00000626109 SERF1AO75920 110 aa8.99□□□□□ -0.97
LINC00538-201ENST00000626109 OR5AL1P0C617 328 aa8.99□□□□□ -0.97
LINC00538-201ENST00000626109 SAA4P35542 130 aa8.99□□□□□ -0.97
LINC00538-201ENST00000626109 MLANAQ16655 118 aa8.99□□□□□ -0.97
LINC00538-201ENST00000626109 BRD3OSQ6XYD6 125 aa8.99□□□□□ -0.97
LINC00538-201ENST00000626109 Q75L30 129 aa8.99□□□□□ -0.97
LINC00538-201ENST00000626109 OR2T6Q8NHC8 308 aa8.99□□□□□ -0.97
LINC00538-201ENST00000626109 ZNF418Q8TF45 676 aaPredicted RBP8.99□□□□□ -0.97
LINC00538-201ENST00000626109 SLC25A2Q9BXI2 301 aa8.99□□□□□ -0.97
LINC00538-201ENST00000626109 ZNF331Q9NQX6 463 aaPredicted RBP8.99□□□□□ -0.97
LINC00538-201ENST00000626109 DPM3Q9P2X0 92 aa8.99□□□□□ -0.97
LINC00538-201ENST00000626109 WNK2Q9Y3S1 2297 aa8.99□□□□□ -0.97
LINC00538-201ENST00000626109 AKAP9Q99996 3911 aa8.99□□□□□ -0.97
LINC00538-201ENST00000626109 IZUMO1RA6ND01 250 aa8.99□□□□□ -0.97
LINC00538-201ENST00000626109 GPR183P32249 361 aa8.99□□□□□ -0.97
LINC00538-201ENST00000626109 ZNF137PP52743 207 aa8.99□□□□□ -0.97
LINC00538-201ENST00000626109 IGF2BP2-AS1Q96M15 143 aa8.99□□□□□ -0.97
LINC00538-201ENST00000626109 VPS13CQ709C8 3753 aa8.99□□□□□ -0.97
LINC00538-201ENST00000626109 TEX15Q9BXT5 2789 aa8.98□□□□□ -0.97
LINC00538-201ENST00000626109 APOHP02749 345 aaPredicted RBP8.98□□□□□ -0.97
LINC00538-201ENST00000626109 TMEM183BQ1AE95 376 aa8.98□□□□□ -0.97
LINC00538-201ENST00000626109 MRPL55Q7Z7F7 128 aaKnown RBP8.98□□□□□ -0.97
LINC00538-201ENST00000626109 FAM167A-AS1Q96KT0 104 aa8.98□□□□□ -0.97
LINC00538-201ENST00000626109 ZNF355PQ9NSJ1 428 aa8.98□□□□□ -0.97
LINC00538-201ENST00000626109 ZNF586Q9NXT0 402 aa8.98□□□□□ -0.97
LINC00538-201ENST00000626109 OOSP1A8MZH6 123 aa8.97□□□□□ -0.97
LINC00538-201ENST00000626109 ORM2P19652 201 aa8.97□□□□□ -0.97
LINC00538-201ENST00000626109 APOC4P55056 127 aa8.97□□□□□ -0.97
LINC00538-201ENST00000626109 TMEM136Q6ZRR5 245 aa8.97□□□□□ -0.97
LINC00538-201ENST00000626109 GOLT1AQ6ZVE7 132 aa8.97□□□□□ -0.97
LINC00538-201ENST00000626109 MRPL27Q9P0M9 148 aaKnown RBP8.97□□□□□ -0.97
LINC00538-201ENST00000626109 IGLV2-23P01705 113 aa8.97□□□□□ -0.97
LINC00538-201ENST00000626109 IGLV2-8P01709 118 aa8.97□□□□□ -0.97
LINC00538-201ENST00000626109 APCSP02743 223 aa8.97□□□□□ -0.97
LINC00538-201ENST00000626109 WT1-ASQ06250 92 aa8.97□□□□□ -0.97
LINC00538-201ENST00000626109 FXYD3Q14802 87 aa8.97□□□□□ -0.97
LINC00538-201ENST00000626109 NEGR1Q7Z3B1 354 aa8.97□□□□□ -0.97
LINC00538-201ENST00000626109 TP53TG3Q9ULZ0 132 aa8.97□□□□□ -0.97
LINC00538-201ENST00000626109 HILPDAQ9Y5L2 63 aa8.97□□□□□ -0.97
LINC00538-201ENST00000626109 TRAV5A0A0B4J249 113 aa8.96□□□□□ -0.97
LINC00538-201ENST00000626109 A0A1B0GX51 115 aa8.96□□□□□ -0.97
LINC00538-201ENST00000626109 GAGE12JA6NER3 117 aa8.96□□□□□ -0.97
LINC00538-201ENST00000626109 LY6LH3BQJ8 138 aa8.96□□□□□ -0.97
LINC00538-201ENST00000626109 PEX7O00628 323 aa8.96□□□□□ -0.97
LINC00538-201ENST00000626109 ZNF253O75346 499 aa8.96□□□□□ -0.97
LINC00538-201ENST00000626109 CRLF1O75462 422 aa8.96□□□□□ -0.97
LINC00538-201ENST00000626109 GAGE7O76087 117 aa8.96□□□□□ -0.97
LINC00538-201ENST00000626109 GPX1P07203 203 aa8.96□□□□□ -0.97
LINC00538-201ENST00000626109 GAGE12FP0CL80 117 aa8.96□□□□□ -0.97
LINC00538-201ENST00000626109 GAGE12GP0CL81 117 aa8.96□□□□□ -0.97
LINC00538-201ENST00000626109 GAGE12IP0CL82 117 aa8.96□□□□□ -0.97
LINC00538-201ENST00000626109 NTF3P20783 257 aa8.96□□□□□ -0.97
LINC00538-201ENST00000626109 UBE2G1P62253 170 aa8.96□□□□□ -0.97
LINC00538-201ENST00000626109 RPS28P62857 69 aaKnown RBP8.96□□□□□ -0.97
LINC00538-201ENST00000626109 GAGE4Q13068 117 aa8.96□□□□□ -0.97
LINC00538-201ENST00000626109 TEX43Q6ZNM6 134 aa8.96□□□□□ -0.97
LINC00538-201ENST00000626109 ZNF329Q86UD4 541 aa8.96□□□□□ -0.97
LINC00538-201ENST00000626109 ANAPC13Q9BS18 74 aa8.96□□□□□ -0.97
LINC00538-201ENST00000626109 C1QTNF4Q9BXJ3 329 aa8.96□□□□□ -0.97
LINC00538-201ENST00000626109 PRSS22Q9GZN4 317 aa8.96□□□□□ -0.97
LINC00538-201ENST00000626109 GNB4Q9HAV0 340 aa8.96□□□□□ -0.97
LINC00538-201ENST00000626109 CSPG4Q6UVK1 2322 aa8.96□□□□□ -0.97
LINC00538-201ENST00000626109 ACANP16112 2415 aa8.96□□□□□ -0.98
LINC00538-201ENST00000626109 INAFM1C9JVW0 142 aa8.95□□□□□ -0.98
LINC00538-201ENST00000626109 MOSP00540 346 aa8.95□□□□□ -0.98
LINC00538-201ENST00000626109 TSPOP30536 169 aa8.95□□□□□ -0.98
LINC00538-201ENST00000626109 SRIP30626 198 aa8.95□□□□□ -0.98
LINC00538-201ENST00000626109 DIAPH2-AS1Q14236 149 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms