RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 ZNF491Q8N8L2 437 aa11.86□□□□□ -0.51
PMS1-221ENST00000624204 B5MCH6 92 aa11.85□□□□□ -0.51
PMS1-221ENST00000624204 MORN3Q6PF18 240 aaPredicted RBP11.85□□□□□ -0.51
PMS1-221ENST00000624204 ZFP2Q6ZN57 461 aa11.85□□□□□ -0.51
PMS1-221ENST00000624204 C22orf34Q6ZV56 151 aa11.85□□□□□ -0.51
PMS1-221ENST00000624204 VSTM5A8MXK1 200 aa11.85□□□□□ -0.51
PMS1-221ENST00000624204 I3L2K1 104 aa11.85□□□□□ -0.51
PMS1-221ENST00000624204 PRTN3P24158 256 aa11.85□□□□□ -0.51
PMS1-221ENST00000624204 TRBV20-1A0A075B6N2 111 aa11.85□□□□□ -0.51
PMS1-221ENST00000624204 NDUFB3O43676 98 aa11.85□□□□□ -0.51
PMS1-221ENST00000624204 CD40P25942 277 aa11.85□□□□□ -0.51
PMS1-221ENST00000624204 CFAP126Q5VTH2 177 aa11.85□□□□□ -0.51
PMS1-221ENST00000624204 DTX2Q86UW9 622 aa11.85□□□□□ -0.51
PMS1-221ENST00000624204 IGLV3-9A0A075B6K5 115 aa11.84□□□□□ -0.51
PMS1-221ENST00000624204 TEX22C9J3V5 150 aa11.84□□□□□ -0.51
PMS1-221ENST00000624204 HLA-DRB4P13762 266 aa11.84□□□□□ -0.51
PMS1-221ENST00000624204 KIR2DL4Q99706 377 aa11.84□□□□□ -0.51
PMS1-221ENST00000624204 CTSZQ9UBR2 303 aa11.84□□□□□ -0.51
PMS1-221ENST00000624204 HLA-DRB4X5D2U9 266 aa11.84□□□□□ -0.51
PMS1-221ENST00000624204 DOPEY2Q9Y3R5 2298 aa11.84□□□□□ -0.51
PMS1-221ENST00000624204 TRBV7-3A0A075B6L6 115 aa11.84□□□□□ -0.51
PMS1-221ENST00000624204 FCN3O75636 299 aa11.84□□□□□ -0.51
PMS1-221ENST00000624204 DKK4Q9UBT3 224 aa11.84□□□□□ -0.51
PMS1-221ENST00000624204 ARRDC1-AS1Q9H2J1 176 aa11.83□□□□□ -0.51
PMS1-221ENST00000624204 ERG28Q9UKR5 140 aa11.83□□□□□ -0.51
PMS1-221ENST00000624204 LAMTOR5O43504 91 aa11.83□□□□□ -0.52
PMS1-221ENST00000624204 C1orf210Q8IVY1 113 aa11.83□□□□□ -0.52
PMS1-221ENST00000624204 FAM90A27PA6NNH2 459 aa11.83□□□□□ -0.52
PMS1-221ENST00000624204 IGLC6P0CF74 106 aa11.83□□□□□ -0.52
PMS1-221ENST00000624204 Q8N8P6 123 aa11.83□□□□□ -0.52
PMS1-221ENST00000624204 FDCSPQ8NFU4 85 aa11.83□□□□□ -0.52
PMS1-221ENST00000624204 A0A087WX48 190 aa11.82□□□□□ -0.52
PMS1-221ENST00000624204 MYMXA0A1B0GTQ4 84 aa11.82□□□□□ -0.52
PMS1-221ENST00000624204 TSPAN13O95857 204 aa11.82□□□□□ -0.52
PMS1-221ENST00000624204 COLQQ9Y215 455 aaPredicted RBP11.82□□□□□ -0.52
PMS1-221ENST00000624204 LAGE3Q14657 143 aa11.82□□□□□ -0.52
PMS1-221ENST00000624204 RNF182Q8N6D2 247 aa11.82□□□□□ -0.52
PMS1-221ENST00000624204 BEX4Q9NWD9 120 aaPredicted RBP11.82□□□□□ -0.52
PMS1-221ENST00000624204 TRGV3P03979 118 aa11.82□□□□□ -0.52
PMS1-221ENST00000624204 TEX36Q5VZQ5 186 aa11.82□□□□□ -0.52
PMS1-221ENST00000624204 K7EIM0 57 aa11.81□□□□□ -0.52
PMS1-221ENST00000624204 SCGB2A1O75556 95 aa11.81□□□□□ -0.52
PMS1-221ENST00000624204 Q6ZQT7 251 aa11.81□□□□□ -0.52
PMS1-221ENST00000624204 RAXQ9Y2V3 346 aa11.81□□□□□ -0.52
PMS1-221ENST00000624204 IGKV3-7A0A075B6H7 116 aa11.81□□□□□ -0.52
PMS1-221ENST00000624204 PLNP26678 52 aa11.81□□□□□ -0.52
PMS1-221ENST00000624204 PVRIGQ6DKI7 326 aa11.81□□□□□ -0.52
PMS1-221ENST00000624204 KLHL30-AS1Q8NEE0 82 aa11.81□□□□□ -0.52
PMS1-221ENST00000624204 C2CD3Q4AC94 2353 aa11.8□□□□□ -0.52
PMS1-221ENST00000624204 CEACAM4O75871 244 aa11.8□□□□□ -0.52
PMS1-221ENST00000624204 IGHG3P01860 377 aa11.8□□□□□ -0.52
PMS1-221ENST00000624204 ZNF474Q6S9Z5 364 aaPredicted RBP11.8□□□□□ -0.52
PMS1-221ENST00000624204 TEX29Q8N6K0 151 aa11.8□□□□□ -0.52
PMS1-221ENST00000624204 PPDPFLQ8WWR9 84 aa11.8□□□□□ -0.52
PMS1-221ENST00000624204 MRPS12O15235 138 aaKnown RBP11.8□□□□□ -0.52
PMS1-221ENST00000624204 C5orf64Q2M2E5 130 aa11.8□□□□□ -0.52
PMS1-221ENST00000624204 ZFAND6Q6FIF0 208 aa11.8□□□□□ -0.52
PMS1-221ENST00000624204 ONECUT1Q9UBC0 465 aa11.8□□□□□ -0.52
PMS1-221ENST00000624204 SORL1Q92673 2214 aa11.8□□□□□ -0.52
PMS1-221ENST00000624204 ZNF815PA8K554 130 aa11.8□□□□□ -0.52
PMS1-221ENST00000624204 TMEM78Q5T7P6 136 aa11.8□□□□□ -0.52
PMS1-221ENST00000624204 FABP5P3A8MUU1 101 aa11.79□□□□□ -0.52
PMS1-221ENST00000624204 IGHV1-8P0DP01 117 aa11.79□□□□□ -0.52
PMS1-221ENST00000624204 PRSS33Q8NF86 280 aa11.79□□□□□ -0.52
PMS1-221ENST00000624204 ATP6V0E2Q8NHE4 81 aa11.79□□□□□ -0.52
PMS1-221ENST00000624204 CARD19Q96LW7 228 aa11.79□□□□□ -0.52
PMS1-221ENST00000624204 A6NJY4 79 aa11.79□□□□□ -0.52
PMS1-221ENST00000624204 GAGE5Q13069 117 aa11.79□□□□□ -0.52
PMS1-221ENST00000624204 GAGE6Q13070 117 aa11.79□□□□□ -0.52
PMS1-221ENST00000624204 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.79□□□□□ -0.522e-12■■■■■ 45.1
PMS1-221ENST00000624204 COL12A1Q99715 3063 aa11.79□□□□□ -0.52
PMS1-221ENST00000624204 LGALS1P09382 135 aaKnown RBP11.79□□□□□ -0.52
PMS1-221ENST00000624204 RPL7P18124 248 aaKnown RBP11.79□□□□□ -0.52
PMS1-221ENST00000624204 PDE6HQ13956 83 aa11.79□□□□□ -0.52
PMS1-221ENST00000624204 LINC01559Q495D7 138 aa11.79□□□□□ -0.52
PMS1-221ENST00000624204 LINC00311Q8N616 119 aa11.79□□□□□ -0.52
PMS1-221ENST00000624204 ZFHX2Q9C0A1 2572 aaPredicted RBP11.78□□□□□ -0.52
PMS1-221ENST00000624204 F8VRH5 84 aa11.78□□□□□ -0.52
PMS1-221ENST00000624204 ANKRD11Q6UB99 2663 aaPredicted RBP11.78□□□□□ -0.52
PMS1-221ENST00000624204 H7C1H1 209 aa11.78□□□□□ -0.52
PMS1-221ENST00000624204 TEN1Q86WV5 123 aa11.78□□□□□ -0.52
PMS1-221ENST00000624204 IGHV1-3A0A0C4DH29 117 aa11.77□□□□□ -0.52
PMS1-221ENST00000624204 RAX2Q96IS3 184 aa11.77□□□□□ -0.52
PMS1-221ENST00000624204 SCGB3A1Q96QR1 104 aa11.77□□□□□ -0.52
PMS1-221ENST00000624204 PRADC1Q9BSG0 188 aa11.77□□□□□ -0.52
PMS1-221ENST00000624204 IGHV3-64A0A075B6Q5 118 aa11.77□□□□□ -0.53
PMS1-221ENST00000624204 M0R381 172 aa11.77□□□□□ -0.53
PMS1-221ENST00000624204 LOXP28300 417 aaPredicted RBP11.77□□□□□ -0.53
PMS1-221ENST00000624204 DYNLRB1Q9NP97 96 aa11.77□□□□□ -0.53
PMS1-221ENST00000624204 SPANXN1Q5VSR9 72 aa11.77□□□□□ -0.53
PMS1-221ENST00000624204 GFRALQ6UXV0 394 aa11.77□□□□□ -0.53
PMS1-221ENST00000624204 A8MWV9 139 aa11.76□□□□□ -0.53
PMS1-221ENST00000624204 THBDP07204 575 aa11.76□□□□□ -0.53
PMS1-221ENST00000624204 CRYGBP07316 175 aa11.76□□□□□ -0.53
PMS1-221ENST00000624204 MGPP08493 103 aa11.76□□□□□ -0.53
PMS1-221ENST00000624204 CEP295Q9C0D2 2601 aa11.76□□□□□ -0.53
PMS1-221ENST00000624204 IGLV2-18A0A075B6J9 118 aa11.76□□□□□ -0.53
PMS1-221ENST00000624204 CFHR4Q92496 578 aa11.76□□□□□ -0.53
PMS1-221ENST00000624204 PLEKHB2Q96CS7 222 aa11.76□□□□□ -0.53
PMS1-221ENST00000624204 ZNF688P0C7X2 276 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 141.7 ms