RNA–Protein interactions for RNA: ENST00000620033.4

CHL1-216, Transcript of cell adhesion molecule L1 like, humanhuman

TSL 1 (best) BASIC

Gene CHL1, Length 7,311 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1-216ENST00000620033 PLEKHB2Q96CS7 222 aa3.55□□□□□ -1.84
CHL1-216ENST00000620033 DNAJC30Q96LL9 226 aa3.55□□□□□ -1.84
CHL1-216ENST00000620033 LTAP01374 205 aa3.54□□□□□ -1.84
CHL1-216ENST00000620033 HRCT1Q6UXD1 115 aa3.54□□□□□ -1.84
CHL1-216ENST00000620033 BBC3Q96PG8 261 aaPredicted RBP3.54□□□□□ -1.84
CHL1-216ENST00000620033 KLHDC3Q9BQ90 382 aa3.54□□□□□ -1.84
CHL1-216ENST00000620033 HSPB9Q9BQS6 159 aa3.54□□□□□ -1.84
CHL1-216ENST00000620033 TRBV5-3A0A0A0MS03 114 aa3.54□□□□□ -1.84
CHL1-216ENST00000620033 TRBV6-7A0A0A0MS04 114 aa3.54□□□□□ -1.84
CHL1-216ENST00000620033 HLA-DQB1P01920 261 aa3.54□□□□□ -1.84
CHL1-216ENST00000620033 DAZ2Q13117 558 aaKnown RBP3.54□□□□□ -1.84
CHL1-216ENST00000620033 FAM19A5Q7Z5A7 132 aaPredicted RBP3.54□□□□□ -1.84
CHL1-216ENST00000620033 DAZ4Q86SG3 579 aaKnown RBP3.54□□□□□ -1.84
CHL1-216ENST00000620033 DAZ3Q9NR90 486 aaKnown RBP3.54□□□□□ -1.84
CHL1-216ENST00000620033 CNTRLQ7Z7A1 2325 aa3.54□□□□□ -1.84
CHL1-216ENST00000620033 A0A0G2JRQ6 117 aa3.54□□□□□ -1.84
CHL1-216ENST00000620033 GAGE12HA6NDE8 117 aa3.54□□□□□ -1.84
CHL1-216ENST00000620033 ATP6V0CP27449 155 aa3.54□□□□□ -1.84
CHL1-216ENST00000620033 TIMM21Q9BVV7 248 aa3.54□□□□□ -1.84
CHL1-216ENST00000620033 KAAG1Q9UBP8 84 aa3.54□□□□□ -1.84
CHL1-216ENST00000620033 HMX2A2RU54 273 aa3.54□□□□□ -1.84
CHL1-216ENST00000620033 M0R143 59 aa3.54□□□□□ -1.84
CHL1-216ENST00000620033 LY6G5BQ8NDX9 201 aa3.54□□□□□ -1.84
CHL1-216ENST00000620033 PRO0255Q9UI72 69 aa3.54□□□□□ -1.84
CHL1-216ENST00000620033 TNRC6AQ8NDV7 1962 aaKnown RBP3.54□□□□□ -1.84
CHL1-216ENST00000620033 H0Y9J4 135 aa3.54□□□□□ -1.84
CHL1-216ENST00000620033 Q8N9W7 124 aa3.54□□□□□ -1.84
CHL1-216ENST00000620033 TMEM263Q8WUH6 116 aaKnown RBP3.54□□□□□ -1.84
CHL1-216ENST00000620033 TMEM190Q8WZ59 177 aa3.54□□□□□ -1.84
CHL1-216ENST00000620033 VSIG2Q96IQ7 327 aa3.54□□□□□ -1.84
CHL1-216ENST00000620033 MAP6D1Q9H9H5 199 aa3.54□□□□□ -1.84
CHL1-216ENST00000620033 LEPROTL1O95214 131 aa3.54□□□□□ -1.84
CHL1-216ENST00000620033 LINC01551Q86U37 167 aa3.54□□□□□ -1.84
CHL1-216ENST00000620033 SSBP4Q9BWG4 385 aaPredicted RBP3.54□□□□□ -1.84
CHL1-216ENST00000620033 PI4KAP42356 2102 aa3.53□□□□□ -1.84
CHL1-216ENST00000620033 SVILO95425 2214 aa3.53□□□□□ -1.84
CHL1-216ENST00000620033 IFITM2Q01629 132 aa3.53□□□□□ -1.84
CHL1-216ENST00000620033 NIT1Q86X76 327 aa3.53□□□□□ -1.84
CHL1-216ENST00000620033 MDFIQ99750 246 aa3.53□□□□□ -1.84
CHL1-216ENST00000620033 ZNF319Q9P2F9 582 aa3.53□□□□□ -1.84
CHL1-216ENST00000620033 CTSZQ9UBR2 303 aa3.53□□□□□ -1.84
CHL1-216ENST00000620033 NYNRINQ9P2P1 1898 aaKnown RBP3.53□□□□□ -1.84
CHL1-216ENST00000620033 PSMG3-AS1Q96PY0 264 aa3.53□□□□□ -1.84
CHL1-216ENST00000620033 LTBP2Q14767 1821 aa3.53□□□□□ -1.84
CHL1-216ENST00000620033 A0A1W2PNU3 283 aaPredicted RBP3.53□□□□□ -1.84
CHL1-216ENST00000620033 A8MWP6 167 aa3.53□□□□□ -1.84
CHL1-216ENST00000620033 DANCRP0C864 163 aa3.53□□□□□ -1.84
CHL1-216ENST00000620033 HERV-K104P63124 156 aa3.53□□□□□ -1.84
CHL1-216ENST00000620033 KPRPQ5T749 579 aaPredicted RBP3.53□□□□□ -1.84
CHL1-216ENST00000620033 ZNF625Q96I27 306 aaPredicted RBP3.53□□□□□ -1.84
CHL1-216ENST00000620033 FNDC4Q9H6D8 234 aaPredicted RBP3.53□□□□□ -1.84
CHL1-216ENST00000620033 TRBV20-1A0A075B6N2 111 aa3.53□□□□□ -1.84
CHL1-216ENST00000620033 TRBV5-5A0A0J9YX44 114 aa3.53□□□□□ -1.84
CHL1-216ENST00000620033 A0A0U1RQV1 116 aa3.53□□□□□ -1.84
CHL1-216ENST00000620033 FAM74A7A6NL05 159 aa3.53□□□□□ -1.84
CHL1-216ENST00000620033 SMIM6P0DI80 62 aa3.53□□□□□ -1.84
CHL1-216ENST00000620033 TDRG1Q3Y452 100 aa3.53□□□□□ -1.84
CHL1-216ENST00000620033 WDR86Q86TI4 376 aa3.53□□□□□ -1.84
CHL1-216ENST00000620033 LRRK1Q38SD2 2015 aa3.53□□□□□ -1.84
CHL1-216ENST00000620033 BRI3O95415 125 aa3.53□□□□□ -1.84
CHL1-216ENST00000620033 COQ2Q96H96 371 aa3.53□□□□□ -1.84
CHL1-216ENST00000620033 PARLQ9H300 379 aa3.53□□□□□ -1.84
CHL1-216ENST00000620033 DOCK9Q9BZ29 2069 aa3.53□□□□□ -1.85
CHL1-216ENST00000620033 YPEL3P61236 119 aaPredicted RBP3.52□□□□□ -1.85
CHL1-216ENST00000620033 MSRB1Q9NZV6 116 aa3.52□□□□□ -1.85
CHL1-216ENST00000620033 TMEM238C9JI98 176 aa3.52□□□□□ -1.85
CHL1-216ENST00000620033 RNASE2P10153 161 aaKnown RBP3.52□□□□□ -1.85
CHL1-216ENST00000620033 C1orf100Q5SVJ3 147 aa3.52□□□□□ -1.85
CHL1-216ENST00000620033 SPATA12Q7Z6I5 190 aa3.52□□□□□ -1.85
CHL1-216ENST00000620033 SIRPDQ9H106 197 aa3.52□□□□□ -1.85
CHL1-216ENST00000620033 IGKV1D-37A0A075B6S9 117 aa3.52□□□□□ -1.85
CHL1-216ENST00000620033 PRSS46E5RG02 174 aa3.52□□□□□ -1.85
CHL1-216ENST00000620033 LINC00614P0C842 121 aa3.52□□□□□ -1.85
CHL1-216ENST00000620033 MTURNQ8N3F0 131 aa3.52□□□□□ -1.85
CHL1-216ENST00000620033 SHANK2-AS3Q9BTD1 123 aa3.52□□□□□ -1.85
CHL1-216ENST00000620033 FGF23Q9GZV9 251 aaPredicted RBP3.52□□□□□ -1.85
CHL1-216ENST00000620033 DOCK4Q8N1I0 1966 aa3.52□□□□□ -1.85
CHL1-216ENST00000620033 HEATR5BQ9P2D3 2071 aa3.52□□□□□ -1.85
CHL1-216ENST00000620033 NCR3O14931 201 aa3.52□□□□□ -1.85
CHL1-216ENST00000620033 HERVK_113P63121 156 aa3.52□□□□□ -1.85
CHL1-216ENST00000620033 HIGD2AQ9BW72 106 aa3.52□□□□□ -1.85
CHL1-216ENST00000620033 ZNF492Q9P255 531 aa3.52□□□□□ -1.85
CHL1-216ENST00000620033 ADAMTS20P59510 1910 aa3.52□□□□□ -1.85
CHL1-216ENST00000620033 SCO2A0A1W2PP80 73 aa3.52□□□□□ -1.85
CHL1-216ENST00000620033 OTX1P32242 354 aaPredicted RBP3.52□□□□□ -1.85
CHL1-216ENST00000620033 C17orf58Q2M2W7 97 aa3.52□□□□□ -1.85
CHL1-216ENST00000620033 LINC00299Q6ZSB3 139 aa3.52□□□□□ -1.85
CHL1-216ENST00000620033 LINC00311Q8N616 119 aa3.52□□□□□ -1.85
CHL1-216ENST00000620033 DIRC1Q969H9 104 aa3.52□□□□□ -1.85
CHL1-216ENST00000620033 TRAV4A0A0B4J268 109 aa3.52□□□□□ -1.85
CHL1-216ENST00000620033 ARMS2P0C7Q2 107 aa3.52□□□□□ -1.85
CHL1-216ENST00000620033 PRR4Q16378 134 aa3.52□□□□□ -1.85
CHL1-216ENST00000620033 KRTAP24-1Q3LI83 254 aa3.52□□□□□ -1.85
CHL1-216ENST00000620033 V9GYH0 126 aa3.52□□□□□ -1.85
CHL1-216ENST00000620033 IGKV1D-8A0A087WSZ0 117 aa3.51□□□□□ -1.85
CHL1-216ENST00000620033 CTRLP40313 264 aa3.51□□□□□ -1.85
CHL1-216ENST00000620033 Q6P435 159 aa3.51□□□□□ -1.85
CHL1-216ENST00000620033 LYPD1Q8N2G4 141 aa3.51□□□□□ -1.85
CHL1-216ENST00000620033 FAM210AQ96ND0 272 aa3.51□□□□□ -1.85
CHL1-216ENST00000620033 PLAC8L1A1L4L8 177 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms