RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 YIPF6Q96EC8 236 aa2.93□□□□□ -1.94
SNCA-213ENST00000618500 ATP5SQ99766 215 aa2.93□□□□□ -1.94
SNCA-213ENST00000618500 PRRT1Q99946 306 aa2.93□□□□□ -1.94
SNCA-213ENST00000618500 MRPL16Q9NX20 251 aaKnown RBP2.93□□□□□ -1.94
SNCA-213ENST00000618500 LINC00869P0C866 280 aa2.93□□□□□ -1.94
SNCA-213ENST00000618500 HIST1H1EP10412 219 aaKnown RBP2.93□□□□□ -1.94
SNCA-213ENST00000618500 RNF151Q2KHN1 245 aa2.93□□□□□ -1.94
SNCA-213ENST00000618500 IGFL4Q6B9Z1 124 aa2.93□□□□□ -1.94
SNCA-213ENST00000618500 FAM122CQ6P4D5 195 aa2.93□□□□□ -1.94
SNCA-213ENST00000618500 WDR73Q6P4I2 378 aa2.93□□□□□ -1.94
SNCA-213ENST00000618500 REG3GQ6UW15 175 aa2.93□□□□□ -1.94
SNCA-213ENST00000618500 SPINK6Q6UWN8 80 aa2.93□□□□□ -1.94
SNCA-213ENST00000618500 DPPA3Q6W0C5 159 aa2.93□□□□□ -1.94
SNCA-213ENST00000618500 OR10P1Q8NGE3 313 aa2.93□□□□□ -1.94
SNCA-213ENST00000618500 DEDD2Q8WXF8 326 aa2.93□□□□□ -1.94
SNCA-213ENST00000618500 PRADC1Q9BSG0 188 aa2.93□□□□□ -1.94
SNCA-213ENST00000618500 SRRQ9GZT4 340 aa2.93□□□□□ -1.94
SNCA-213ENST00000618500 PLAC8Q9NZF1 115 aa2.93□□□□□ -1.94
SNCA-213ENST00000618500 ZNF492Q9P255 531 aa2.93□□□□□ -1.94
SNCA-213ENST00000618500 LINC00854A0A1B0GVQ3 168 aa2.92□□□□□ -1.94
SNCA-213ENST00000618500 SMIM30A4D0T7 59 aa2.92□□□□□ -1.94
SNCA-213ENST00000618500 PANO1I0J062 215 aa2.92□□□□□ -1.94
SNCA-213ENST00000618500 CD3DP04234 171 aa2.92□□□□□ -1.94
SNCA-213ENST00000618500 GATA2P23769 480 aaPredicted RBP2.92□□□□□ -1.94
SNCA-213ENST00000618500 ZFP2Q6ZN57 461 aa2.92□□□□□ -1.94
SNCA-213ENST00000618500 C12orf45Q8N5I9 185 aaPredicted RBP2.92□□□□□ -1.94
SNCA-213ENST00000618500 LRRC20Q8TCA0 184 aa2.92□□□□□ -1.94
SNCA-213ENST00000618500 ZNF479Q96JC4 524 aa2.92□□□□□ -1.94
SNCA-213ENST00000618500 SMIM8Q96KF7 97 aa2.92□□□□□ -1.94
SNCA-213ENST00000618500 ARV1Q9H2C2 271 aa2.92□□□□□ -1.94
SNCA-213ENST00000618500 OR51M1Q9H341 326 aa2.92□□□□□ -1.94
SNCA-213ENST00000618500 STRAPQ9Y3F4 350 aaKnown RBP2.92□□□□□ -1.94
SNCA-213ENST00000618500 TRBV19A0A075B6N1 114 aa2.92□□□□□ -1.94
SNCA-213ENST00000618500 FBLL1A6NHQ2 334 aaKnown RBP2.92□□□□□ -1.94
SNCA-213ENST00000618500 SLC17A3O00476 420 aa2.92□□□□□ -1.94
SNCA-213ENST00000618500 TNFRSF6BO95407 300 aa2.92□□□□□ -1.94
SNCA-213ENST00000618500 RAB3DO95716 219 aa2.92□□□□□ -1.94
SNCA-213ENST00000618500 OR10J4P0C629 311 aa2.92□□□□□ -1.94
SNCA-213ENST00000618500 HTN1P15515 57 aa2.92□□□□□ -1.94
SNCA-213ENST00000618500 BTN1A1Q13410 526 aa2.92□□□□□ -1.94
SNCA-213ENST00000618500 GAGE13Q4V321 117 aa2.92□□□□□ -1.94
SNCA-213ENST00000618500 TMEM14EPQ6UXP3 125 aa2.92□□□□□ -1.94
SNCA-213ENST00000618500 OR1L4Q8NGR5 311 aa2.92□□□□□ -1.94
SNCA-213ENST00000618500 NPVFQ9HCQ7 196 aa2.92□□□□□ -1.94
SNCA-213ENST00000618500 ANKRD65E5RJM6 399 aa2.91□□□□□ -1.94
SNCA-213ENST00000618500 SYNGR2O43760 224 aa2.91□□□□□ -1.94
SNCA-213ENST00000618500 TSC22D2O75157 780 aa2.91□□□□□ -1.94
SNCA-213ENST00000618500 UBE2MP61081 183 aaKnown RBP2.91□□□□□ -1.94
SNCA-213ENST00000618500 AKR1C1Q04828 323 aa2.91□□□□□ -1.94
SNCA-213ENST00000618500 VWC2Q2TAL6 325 aa2.91□□□□□ -1.94
SNCA-213ENST00000618500 MZT2AQ6P582 158 aa2.91□□□□□ -1.94
SNCA-213ENST00000618500 NIT1Q86X76 327 aa2.91□□□□□ -1.94
SNCA-213ENST00000618500 PFDN5Q99471 154 aa2.91□□□□□ -1.94
SNCA-213ENST00000618500 PKIGQ9Y2B9 76 aa2.91□□□□□ -1.94
SNCA-213ENST00000618500 B5MCH6 92 aa2.91□□□□□ -1.94
SNCA-213ENST00000618500 DIRC3C9JPN6 131 aa2.91□□□□□ -1.94
SNCA-213ENST00000618500 AKAIN1P0CW23 69 aa2.91□□□□□ -1.94
SNCA-213ENST00000618500 RPS19P39019 145 aaKnown RBP2.91□□□□□ -1.94
SNCA-213ENST00000618500 INPP1P49441 399 aa2.91□□□□□ -1.94
SNCA-213ENST00000618500 PRR3P79522 188 aaKnown RBP2.91□□□□□ -1.94
SNCA-213ENST00000618500 CD300CQ08708 224 aa2.91□□□□□ -1.94
SNCA-213ENST00000618500 LINC00305Q7Z4B0 112 aa2.91□□□□□ -1.94
SNCA-213ENST00000618500 SPACA4Q8TDM5 124 aa2.91□□□□□ -1.94
SNCA-213ENST00000618500 AGPAT4-IT1Q9H0P7 198 aa2.91□□□□□ -1.94
SNCA-213ENST00000618500 IGHV3-16A0A0C4DH30 117 aa2.9□□□□□ -1.94
SNCA-213ENST00000618500 IL5P05113 134 aa2.9□□□□□ -1.94
SNCA-213ENST00000618500 MGST1P10620 155 aaKnown RBP2.9□□□□□ -1.94
SNCA-213ENST00000618500 ANXA7P20073 488 aaKnown RBP2.9□□□□□ -1.94
SNCA-213ENST00000618500 ZNF138P52744 262 aa2.9□□□□□ -1.94
SNCA-213ENST00000618500 FGF8P55075 233 aaPredicted RBP2.9□□□□□ -1.94
SNCA-213ENST00000618500 MXD1Q05195 221 aa2.9□□□□□ -1.94
SNCA-213ENST00000618500 FGL1Q08830 312 aa2.9□□□□□ -1.94
SNCA-213ENST00000618500 OR10J3Q5JRS4 329 aa2.9□□□□□ -1.94
SNCA-213ENST00000618500 SDIM1Q6ZPB5 146 aa2.9□□□□□ -1.94
SNCA-213ENST00000618500 OR4C5Q8NGB2 326 aa2.9□□□□□ -1.94
SNCA-213ENST00000618500 OR4D10Q8NGI6 311 aa2.9□□□□□ -1.94
SNCA-213ENST00000618500 OR52I2Q8NH67 350 aa2.9□□□□□ -1.94
SNCA-213ENST00000618500 BAALCQ8WXS3 180 aa2.9□□□□□ -1.94
SNCA-213ENST00000618500 AP3S1Q92572 193 aa2.9□□□□□ -1.94
SNCA-213ENST00000618500 Q9HAA7 133 aa2.9□□□□□ -1.94
SNCA-213ENST00000618500 A0A087WWL8 130 aa2.9□□□□□ -1.95
SNCA-213ENST00000618500 H3BQ15 152 aa2.9□□□□□ -1.95
SNCA-213ENST00000618500 NDUFB4O95168 129 aa2.9□□□□□ -1.95
SNCA-213ENST00000618500 RAB31Q13636 194 aa2.9□□□□□ -1.95
SNCA-213ENST00000618500 BAK1Q16611 211 aa2.9□□□□□ -1.95
SNCA-213ENST00000618500 TMEM78Q5T7P6 136 aa2.9□□□□□ -1.95
SNCA-213ENST00000618500 PRR9Q5T870 116 aa2.9□□□□□ -1.95
SNCA-213ENST00000618500 LYZL2Q7Z4W2 148 aa2.9□□□□□ -1.95
SNCA-213ENST00000618500 SMIM4Q8WVI0 70 aa2.9□□□□□ -1.95
SNCA-213ENST00000618500 VAX2Q9UIW0 290 aa2.9□□□□□ -1.95
SNCA-213ENST00000618500 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP2.9□□□□□ -1.95
SNCA-213ENST00000618500 COX7A2P2O60397 106 aa2.9□□□□□ -1.95
SNCA-213ENST00000618500 IGHV3-53P01767 116 aa2.9□□□□□ -1.95
SNCA-213ENST00000618500 GPX1P07203 203 aa2.9□□□□□ -1.95
SNCA-213ENST00000618500 OR5G3P0C626 314 aa2.9□□□□□ -1.95
SNCA-213ENST00000618500 SMIM18P0DKX4 95 aa2.9□□□□□ -1.95
SNCA-213ENST00000618500 RNASE4P34096 147 aaKnown RBP2.9□□□□□ -1.95
SNCA-213ENST00000618500 C10orf113Q5VZT2 155 aa2.9□□□□□ -1.95
SNCA-213ENST00000618500 OR10G7Q8NGN6 311 aa2.9□□□□□ -1.95
SNCA-213ENST00000618500 ZC2HC1AQ96GY0 325 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms