RNA–Protein interactions for RNA: ENST00000618411.4

SRRT-217, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,893 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-217ENST00000618411 C22orf34Q6ZV56 151 aa11.68□□□□□ -0.54
SRRT-217ENST00000618411 TRBV20-1A0A075B6N2 111 aa11.68□□□□□ -0.54
SRRT-217ENST00000618411 TRGV3P03979 118 aa11.68□□□□□ -0.54
SRRT-217ENST00000618411 ZNF688P0C7X2 276 aa11.68□□□□□ -0.54
SRRT-217ENST00000618411 LPAL2Q16609 132 aa11.68□□□□□ -0.54
SRRT-217ENST00000618411 RALYQ9UKM9 306 aaKnown RBP11.67□□□□□ -0.54
SRRT-217ENST00000618411 ADIPOQQ15848 244 aa11.67□□□□□ -0.54
SRRT-217ENST00000618411 S4R3C0 116 aa11.67□□□□□ -0.54
SRRT-217ENST00000618411 CD7P09564 240 aa11.66□□□□□ -0.54
SRRT-217ENST00000618411 HLA-DMBP28068 263 aa11.66□□□□□ -0.54
SRRT-217ENST00000618411 SRSF9Q13242 221 aaKnown RBP eCLIP11.66□□□□□ -0.54
SRRT-217ENST00000618411 NEXN-AS1Q8NBZ9 246 aa11.66□□□□□ -0.54
SRRT-217ENST00000618411 PRADC1Q9BSG0 188 aa11.66□□□□□ -0.54
SRRT-217ENST00000618411 SMAD5-AS1Q9Y6J3 95 aa11.66□□□□□ -0.54
SRRT-217ENST00000618411 A8MWV9 139 aa11.66□□□□□ -0.54
SRRT-217ENST00000618411 IGFL4Q6B9Z1 124 aa11.66□□□□□ -0.54
SRRT-217ENST00000618411 TEX29Q8N6K0 151 aa11.66□□□□□ -0.54
SRRT-217ENST00000618411 CFHR4Q92496 578 aa11.66□□□□□ -0.54
SRRT-217ENST00000618411 SCGB3A1Q96QR1 104 aa11.66□□□□□ -0.54
SRRT-217ENST00000618411 SS18L2Q9UHA2 77 aa11.66□□□□□ -0.54
SRRT-217ENST00000618411 IGKV3D-20A0A0C4DH25 116 aa11.65□□□□□ -0.54
SRRT-217ENST00000618411 ZNF815PA8K554 130 aa11.65□□□□□ -0.54
SRRT-217ENST00000618411 CD59P13987 128 aa11.65□□□□□ -0.54
SRRT-217ENST00000618411 SLC25A16P16260 332 aa11.65□□□□□ -0.54
SRRT-217ENST00000618411 DYNAPQ8N1N2 210 aa11.65□□□□□ -0.54
SRRT-217ENST00000618411 FAM27E3Q08E93 113 aa11.65□□□□□ -0.54
SRRT-217ENST00000618411 ORMDL2Q53FV1 153 aa11.65□□□□□ -0.54
SRRT-217ENST00000618411 SCGB1D4Q6XE38 83 aa11.65□□□□□ -0.54
SRRT-217ENST00000618411 SMIM2Q9BVW6 85 aa11.65□□□□□ -0.54
SRRT-217ENST00000618411 TRAV26-2A0A0B4J265 109 aa11.65□□□□□ -0.55
SRRT-217ENST00000618411 RBAKDNA6NC62 111 aa11.65□□□□□ -0.55
SRRT-217ENST00000618411 F8W735 103 aaPredicted RBP11.65□□□□□ -0.55
SRRT-217ENST00000618411 DLX1P56177 255 aa11.65□□□□□ -0.55
SRRT-217ENST00000618411 TOMM6Q96B49 74 aa11.65□□□□□ -0.55
SRRT-217ENST00000618411 FANCD2OSQ96PS1 177 aa11.65□□□□□ -0.55
SRRT-217ENST00000618411 IGLV11-55A0A075B6I3 123 aa11.64□□□□□ -0.55
SRRT-217ENST00000618411 IGHV4-4A0A075B6R2 117 aa11.64□□□□□ -0.55
SRRT-217ENST00000618411 ERCC8Q13216 396 aa11.64□□□□□ -0.55
SRRT-217ENST00000618411 FAM215AQ9Y5M1 114 aa11.64□□□□□ -0.55
SRRT-217ENST00000618411 SFTA2Q6UW10 78 aa11.64□□□□□ -0.55
SRRT-217ENST00000618411 CITED1Q99966 193 aa11.64□□□□□ -0.55
SRRT-217ENST00000618411 UFC1Q9Y3C8 167 aa11.64□□□□□ -0.55
SRRT-217ENST00000618411 TCL1BO95988 128 aa11.63□□□□□ -0.55
SRRT-217ENST00000618411 COX6B1P14854 86 aa11.63□□□□□ -0.55
SRRT-217ENST00000618411 NDUFA11Q86Y39 141 aa11.63□□□□□ -0.55
SRRT-217ENST00000618411 C21orf62Q9NYP8 219 aa11.63□□□□□ -0.55
SRRT-217ENST00000618411 DMDP11532 3685 aa11.63□□□□□ -0.55
SRRT-217ENST00000618411 SRD5A1P18405 259 aa11.63□□□□□ -0.55
SRRT-217ENST00000618411 VKORC1Q9BQB6 163 aa11.63□□□□□ -0.55
SRRT-217ENST00000618411 C11orf21Q9P2W6 132 aa11.63□□□□□ -0.55
SRRT-217ENST00000618411 IGHV7-4-1A0A0J9YVY3 117 aa11.62□□□□□ -0.55
SRRT-217ENST00000618411 LINC01548A6NM66 108 aa11.62□□□□□ -0.55
SRRT-217ENST00000618411 PRB3Q04118 309 aaPredicted RBP11.62□□□□□ -0.55
SRRT-217ENST00000618411 SLC50A1Q9BRV3 221 aa11.62□□□□□ -0.55
SRRT-217ENST00000618411 LY6LH3BQJ8 138 aa11.62□□□□□ -0.55
SRRT-217ENST00000618411 PLEKHB2Q96CS7 222 aa11.62□□□□□ -0.55
SRRT-217ENST00000618411 PRAC2D3DTV9 90 aa11.61□□□□□ -0.55
SRRT-217ENST00000618411 NBR2O15453 112 aa11.61□□□□□ -0.55
SRRT-217ENST00000618411 IGFBPL1Q8WX77 278 aa11.61□□□□□ -0.55
SRRT-217ENST00000618411 SCGB2A1O75556 95 aa11.61□□□□□ -0.55
SRRT-217ENST00000618411 C1orf210Q8IVY1 113 aa11.61□□□□□ -0.55
SRRT-217ENST00000618411 ANKRD29Q8N6D5 301 aa11.61□□□□□ -0.55
SRRT-217ENST00000618411 B5MCH6 92 aa11.61□□□□□ -0.55
SRRT-217ENST00000618411 TIMM23O14925 209 aa11.61□□□□□ -0.55
SRRT-217ENST00000618411 NHLRC4P0CG21 123 aaPredicted RBP11.61□□□□□ -0.55
SRRT-217ENST00000618411 COX7A1P24310 79 aa11.61□□□□□ -0.55
SRRT-217ENST00000618411 SPANXN1Q5VSR9 72 aa11.61□□□□□ -0.55
SRRT-217ENST00000618411 CFAP161Q6P656 301 aa11.61□□□□□ -0.55
SRRT-217ENST00000618411 KLK15Q9H2R5 256 aa11.61□□□□□ -0.55
SRRT-217ENST00000618411 ZGRF1Q86YA3 2104 aa11.6□□□□□ -0.55
SRRT-217ENST00000618411 ROS1P08922 2347 aa11.6□□□□□ -0.55
SRRT-217ENST00000618411 M0QXV9 152 aa11.6□□□□□ -0.55
SRRT-217ENST00000618411 RHODO00212 210 aa11.6□□□□□ -0.55
SRRT-217ENST00000618411 ASIPP42127 132 aa11.6□□□□□ -0.55
SRRT-217ENST00000618411 BAALCQ8WXS3 180 aa11.6□□□□□ -0.55
SRRT-217ENST00000618411 ARRDC1-AS1Q9H2J1 176 aa11.6□□□□□ -0.55
SRRT-217ENST00000618411 RASL10AQ92737 203 aa11.6□□□□□ -0.55
SRRT-217ENST00000618411 FAM90A27PA6NNH2 459 aa11.59□□□□□ -0.55
SRRT-217ENST00000618411 SUMO2P61956 95 aaKnown RBP11.59□□□□□ -0.55
SRRT-217ENST00000618411 NPBQ8NG41 125 aa11.59□□□□□ -0.55
SRRT-217ENST00000618411 CTSGP08311 255 aa11.59□□□□□ -0.55
SRRT-217ENST00000618411 C10orf126Q8N4M7 172 aa11.59□□□□□ -0.55
SRRT-217ENST00000618411 KIR2DL4Q99706 377 aa11.59□□□□□ -0.55
SRRT-217ENST00000618411 AGPAT4-IT1Q9H0P7 198 aa11.59□□□□□ -0.55
SRRT-217ENST00000618411 A0A0J9YY99 117 aa11.58□□□□□ -0.56
SRRT-217ENST00000618411 H3BVH4 76 aa11.58□□□□□ -0.56
SRRT-217ENST00000618411 RNASE6Q93091 150 aaKnown RBP11.58□□□□□ -0.56
SRRT-217ENST00000618411 TECTAO75443 2155 aa11.58□□□□□ -0.56
SRRT-217ENST00000618411 SCGB1C2P0DMR2 95 aa11.58□□□□□ -0.56
SRRT-217ENST00000618411 AJUBAQ96IF1 538 aa11.58□□□□□ -0.56
SRRT-217ENST00000618411 CFC1BP0CG36 223 aa11.57□□□□□ -0.56
SRRT-217ENST00000618411 CFC1P0CG37 223 aa11.57□□□□□ -0.56
SRRT-217ENST00000618411 GAGE2BQ13066 116 aa11.57□□□□□ -0.56
SRRT-217ENST00000618411 GAGE2EQ4V326 116 aa11.57□□□□□ -0.56
SRRT-217ENST00000618411 C2orf66Q6UXQ4 117 aa11.57□□□□□ -0.56
SRRT-217ENST00000618411 GAGE2DQ9UEU5 116 aa11.57□□□□□ -0.56
SRRT-217ENST00000618411 KLHL30-AS1Q8NEE0 82 aa11.57□□□□□ -0.56
SRRT-217ENST00000618411 ONECUT1Q9UBC0 465 aa11.57□□□□□ -0.56
SRRT-217ENST00000618411 BSPH1Q075Z2 132 aa11.57□□□□□ -0.56
SRRT-217ENST00000618411 CFAP47Q6ZTR5 3102 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms