RNA–Protein interactions for RNA: ENST00000618262.4

SRRT-216, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-216ENST00000618262 AVPP01185 164 aa9.51□□□□□ -0.89
SRRT-216ENST00000618262 IGKV1-13P0DP09 117 aa9.51□□□□□ -0.89
SRRT-216ENST00000618262 TMEM155Q4W5P6 130 aa9.51□□□□□ -0.89
SRRT-216ENST00000618262 RUSC1-AS1Q66K80 236 aa9.51□□□□□ -0.89
SRRT-216ENST00000618262 TEPPQ6URK8 271 aa9.51□□□□□ -0.89
SRRT-216ENST00000618262 LHFPL1Q86WI0 220 aa9.51□□□□□ -0.89
SRRT-216ENST00000618262 PPDPFLQ8WWR9 84 aa9.51□□□□□ -0.89
SRRT-216ENST00000618262 MRPL53Q96EL3 112 aaKnown RBP9.51□□□□□ -0.89
SRRT-216ENST00000618262 E9PLD3 99 aa9.51□□□□□ -0.89
SRRT-216ENST00000618262 CSN1S1P47710 185 aa9.51□□□□□ -0.89
SRRT-216ENST00000618262 TAS2R45P59539 299 aa9.51□□□□□ -0.89
SRRT-216ENST00000618262 A0A0U1RQV1 116 aa9.5□□□□□ -0.89
SRRT-216ENST00000618262 APOHP02749 345 aaPredicted RBP9.5□□□□□ -0.89
SRRT-216ENST00000618262 TMEM252Q8N6L7 170 aa9.5□□□□□ -0.89
SRRT-216ENST00000618262 C7orf69Q9H7B7 122 aa9.5□□□□□ -0.89
SRRT-216ENST00000618262 KAAG1Q9UBP8 84 aa9.5□□□□□ -0.89
SRRT-216ENST00000618262 KLF12Q9Y4X4 402 aa9.5□□□□□ -0.89
SRRT-216ENST00000618262 IGHV3-72A0A0B4J1Y9 119 aa9.5□□□□□ -0.89
SRRT-216ENST00000618262 SPINT2O43291 252 aa9.5□□□□□ -0.89
SRRT-216ENST00000618262 RPL39P5Q59GN2 51 aa9.5□□□□□ -0.89
SRRT-216ENST00000618262 NFE4Q86UQ8 179 aa9.5□□□□□ -0.89
SRRT-216ENST00000618262 C18orf15Q96N68 181 aa9.5□□□□□ -0.89
SRRT-216ENST00000618262 BMPR1BO00238 502 aa9.49□□□□□ -0.89
SRRT-216ENST00000618262 ZC2HC1BQ5TFG8 222 aa9.49□□□□□ -0.89
SRRT-216ENST00000618262 VMO1Q7Z5L0 202 aa9.49□□□□□ -0.89
SRRT-216ENST00000618262 ZNF688P0C7X2 276 aa9.49□□□□□ -0.89
SRRT-216ENST00000618262 Q8N7P7 452 aa9.49□□□□□ -0.89
SRRT-216ENST00000618262 MLST8Q9BVC4 326 aa9.49□□□□□ -0.89
SRRT-216ENST00000618262 HLA-DQA1P01909 254 aa9.48□□□□□ -0.89
SRRT-216ENST00000618262 MSMBP08118 114 aa9.48□□□□□ -0.89
SRRT-216ENST00000618262 SP6Q3SY56 376 aa9.48□□□□□ -0.89
SRRT-216ENST00000618262 C1orf229Q6ZS94 237 aaPredicted RBP9.48□□□□□ -0.89
SRRT-216ENST00000618262 C9orf85Q96MD7 179 aa9.48□□□□□ -0.89
SRRT-216ENST00000618262 CHCHD5Q9BSY4 110 aa9.48□□□□□ -0.89
SRRT-216ENST00000618262 CCL28Q9NRJ3 127 aa9.48□□□□□ -0.89
SRRT-216ENST00000618262 SLC39A9Q9NUM3 307 aa9.48□□□□□ -0.89
SRRT-216ENST00000618262 FN1P02751 2386 aaKnown RBP9.48□□□□□ -0.89
SRRT-216ENST00000618262 DSCAML1Q8TD84 2053 aa9.48□□□□□ -0.89
SRRT-216ENST00000618262 TRAV40A0A0B4J280 105 aa9.48□□□□□ -0.89
SRRT-216ENST00000618262 DUSP14O95147 198 aaKnown RBP9.48□□□□□ -0.89
SRRT-216ENST00000618262 NXPH3O95157 252 aa9.48□□□□□ -0.89
SRRT-216ENST00000618262 OR51H1Q8NH63 302 aa9.48□□□□□ -0.89
SRRT-216ENST00000618262 CR1P17927 2039 aa9.48□□□□□ -0.89
SRRT-216ENST00000618262 CST7O76096 145 aa9.48□□□□□ -0.89
SRRT-216ENST00000618262 APCSP02743 223 aa9.48□□□□□ -0.89
SRRT-216ENST00000618262 IGHV1-8P0DP01 117 aa9.48□□□□□ -0.89
SRRT-216ENST00000618262 GCSHP23434 173 aa9.48□□□□□ -0.89
SRRT-216ENST00000618262 F11RQ9Y624 299 aaKnown RBP9.48□□□□□ -0.89
SRRT-216ENST00000618262 J3QQQ9 107 aa9.47□□□□□ -0.89
SRRT-216ENST00000618262 FRMD6-AS1P0C7T7 363 aa9.47□□□□□ -0.89
SRRT-216ENST00000618262 IGHV4-38-2P0DP08 117 aa9.47□□□□□ -0.89
SRRT-216ENST00000618262 FGF6P10767 208 aa9.47□□□□□ -0.89
SRRT-216ENST00000618262 PFN2P35080 140 aa9.47□□□□□ -0.89
SRRT-216ENST00000618262 LOXL3P58215 753 aa9.47□□□□□ -0.89
SRRT-216ENST00000618262 TAF15Q92804 592 aaKnown RBP eCLIP9.47□□□□□ -0.89
SRRT-216ENST00000618262 VSIRQ9H7M9 311 aa9.47□□□□□ -0.89
SRRT-216ENST00000618262 PYGO1Q9Y3Y4 419 aa9.47□□□□□ -0.89
SRRT-216ENST00000618262 A0A096LNT2 108 aa9.47□□□□□ -0.89
SRRT-216ENST00000618262 PPYP01298 95 aa9.47□□□□□ -0.89
SRRT-216ENST00000618262 IGHV4-31P0DP07 118 aa9.47□□□□□ -0.89
SRRT-216ENST00000618262 ECI1P42126 302 aa9.47□□□□□ -0.89
SRRT-216ENST00000618262 AMTNQ6UX39 209 aa9.47□□□□□ -0.89
SRRT-216ENST00000618262 C3orf22Q8N5N4 141 aa9.47□□□□□ -0.89
SRRT-216ENST00000618262 C1orf159Q96HA4 380 aa9.47□□□□□ -0.89
SRRT-216ENST00000618262 CRYM-AS1A6NIL9 109 aa9.46□□□□□ -0.89
SRRT-216ENST00000618262 SLC25A16P16260 332 aa9.46□□□□□ -0.89
SRRT-216ENST00000618262 GAGE2AQ6NT46 116 aa9.46□□□□□ -0.89
SRRT-216ENST00000618262 Q6ZQT7 251 aa9.46□□□□□ -0.89
SRRT-216ENST00000618262 ZNF331Q9NQX6 463 aaPredicted RBP9.46□□□□□ -0.89
SRRT-216ENST00000618262 B4DSR2 109 aa9.46□□□□□ -0.9
SRRT-216ENST00000618262 OPRK1P41145 380 aa9.46□□□□□ -0.9
SRRT-216ENST00000618262 HERV-K104P61576 105 aa9.46□□□□□ -0.9
SRRT-216ENST00000618262 ZNF818PQ6ZRF7 136 aa9.46□□□□□ -0.9
SRRT-216ENST00000618262 C11orf1Q9H5F2 150 aa9.46□□□□□ -0.9
SRRT-216ENST00000618262 TPSG1Q9NRR2 321 aa9.46□□□□□ -0.9
SRRT-216ENST00000618262 ASIPP42127 132 aa9.45□□□□□ -0.9
SRRT-216ENST00000618262 SERF2P84101 59 aa9.45□□□□□ -0.9
SRRT-216ENST00000618262 LYZL2Q7Z4W2 148 aa9.45□□□□□ -0.9
SRRT-216ENST00000618262 ANAPC10Q9UM13 185 aa9.45□□□□□ -0.9
SRRT-216ENST00000618262 MGST1P10620 155 aaKnown RBP9.45□□□□□ -0.9
SRRT-216ENST00000618262 MMD2Q8IY49 270 aa9.45□□□□□ -0.9
SRRT-216ENST00000618262 IGLL5B9A064 214 aa9.45□□□□□ -0.9
SRRT-216ENST00000618262 ELANEP08246 267 aa9.45□□□□□ -0.9
SRRT-216ENST00000618262 CGB3P0DN86 165 aa9.45□□□□□ -0.9
SRRT-216ENST00000618262 CGB7P0DN87 165 aa9.45□□□□□ -0.9
SRRT-216ENST00000618262 DSCR9P59020 149 aa9.45□□□□□ -0.9
SRRT-216ENST00000618262 BCL6BQ8N143 479 aaPredicted RBP9.45□□□□□ -0.9
SRRT-216ENST00000618262 DPH3Q96FX2 82 aa9.45□□□□□ -0.9
SRRT-216ENST00000618262 FOXC2Q99958 501 aa9.45□□□□□ -0.9
SRRT-216ENST00000618262 PRSS46E5RG02 174 aa9.44□□□□□ -0.9
SRRT-216ENST00000618262 TMEM14EPQ6UXP3 125 aa9.44□□□□□ -0.9
SRRT-216ENST00000618262 LINC01356Q8N9X3 169 aa9.44□□□□□ -0.9
SRRT-216ENST00000618262 PHLDA1Q8WV24 401 aaPredicted RBP9.44□□□□□ -0.9
SRRT-216ENST00000618262 KCNIP2Q9NS61 270 aa9.44□□□□□ -0.9
SRRT-216ENST00000618262 LEPROTL1O95214 131 aa9.44□□□□□ -0.9
SRRT-216ENST00000618262 CD164Q04900 197 aa9.44□□□□□ -0.9
SRRT-216ENST00000618262 LINC00479Q96M42 142 aa9.44□□□□□ -0.9
SRRT-216ENST00000618262 NPIPB11E5RHQ5 1161 aa9.43□□□□□ -0.9
SRRT-216ENST00000618262 AMY1AP04745 511 aa9.43□□□□□ -0.9
SRRT-216ENST00000618262 SAA2P0DJI9 122 aaPredicted RBP9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms