RNA–Protein interactions for RNA: ENST00000617474.1

PTPRT-210, Transcript of protein tyrosine phosphatase, receptor type T, humanhuman

TSL 5

Gene PTPRT, Length 4,521 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRT-210ENST00000617474 SPOCK3Q9BQ16 436 aa12.25□□□□□ -0.45
PTPRT-210ENST00000617474 LINC01549A6NIU2 74 aa12.24□□□□□ -0.45
PTPRT-210ENST00000617474 OOSP1A8MZH6 123 aa12.24□□□□□ -0.45
PTPRT-210ENST00000617474 E7EUB6 86 aa12.24□□□□□ -0.45
PTPRT-210ENST00000617474 RUSC1-AS1Q66K80 236 aa12.24□□□□□ -0.45
PTPRT-210ENST00000617474 DTX2Q86UW9 622 aa12.24□□□□□ -0.45
PTPRT-210ENST00000617474 MRPL36Q9P0J6 103 aaKnown RBP12.24□□□□□ -0.45
PTPRT-210ENST00000617474 KIAA1549LQ6ZVL6 1849 aa12.24□□□□□ -0.45
PTPRT-210ENST00000617474 KNCNA6PVL3 124 aa12.24□□□□□ -0.45
PTPRT-210ENST00000617474 C22orf46C9J442 243 aa12.24□□□□□ -0.45
PTPRT-210ENST00000617474 C9JAW5 83 aa12.24□□□□□ -0.45
PTPRT-210ENST00000617474 NDUFS7O75251 213 aa12.24□□□□□ -0.45
PTPRT-210ENST00000617474 PROP1O75360 226 aa12.24□□□□□ -0.45
PTPRT-210ENST00000617474 ANKRD39Q53RE8 183 aa12.23□□□□□ -0.45
PTPRT-210ENST00000617474 TTTY13Q9BZ97 58 aa12.23□□□□□ -0.45
PTPRT-210ENST00000617474 TP53TG1Q9Y2A0 90 aa12.23□□□□□ -0.45
PTPRT-210ENST00000617474 TRBV7-1A0A0A6YYK4 115 aa12.23□□□□□ -0.45
PTPRT-210ENST00000617474 LINC00311Q8N616 119 aa12.23□□□□□ -0.45
PTPRT-210ENST00000617474 FAM167A-AS1Q96KT0 104 aa12.23□□□□□ -0.45
PTPRT-210ENST00000617474 K7EMI3 77 aa12.23□□□□□ -0.45
PTPRT-210ENST00000617474 M0R2P5 195 aa12.23□□□□□ -0.45
PTPRT-210ENST00000617474 EGR2P11161 476 aaPredicted RBP12.23□□□□□ -0.45
PTPRT-210ENST00000617474 ZNF625Q96I27 306 aaPredicted RBP12.23□□□□□ -0.45
PTPRT-210ENST00000617474 SPINK8P0C7L1 97 aa12.23□□□□□ -0.45
PTPRT-210ENST00000617474 UTF1Q5T230 341 aa12.23□□□□□ -0.45
PTPRT-210ENST00000617474 TLN2Q9Y4G6 2542 aa12.22□□□□□ -0.45
PTPRT-210ENST00000617474 TMEM238C9JI98 176 aa12.22□□□□□ -0.45
PTPRT-210ENST00000617474 DUSP14O95147 198 aaKnown RBP12.22□□□□□ -0.45
PTPRT-210ENST00000617474 MSRB1Q9NZV6 116 aa12.22□□□□□ -0.45
PTPRT-210ENST00000617474 K7EM74 188 aa12.22□□□□□ -0.45
PTPRT-210ENST00000617474 PHLDA1Q8WV24 401 aaPredicted RBP12.22□□□□□ -0.45
PTPRT-210ENST00000617474 TMEM14CQ9P0S9 112 aa12.22□□□□□ -0.45
PTPRT-210ENST00000617474 TRAV8-4A0A0B4J246 113 aa12.22□□□□□ -0.45
PTPRT-210ENST00000617474 IGHV3-53P01767 116 aa12.22□□□□□ -0.45
PTPRT-210ENST00000617474 A0A1W2PPM0 123 aa12.21□□□□□ -0.45
PTPRT-210ENST00000617474 K7EP34 96 aa12.21□□□□□ -0.45
PTPRT-210ENST00000617474 BRWD1-AS2P59051 145 aa12.21□□□□□ -0.45
PTPRT-210ENST00000617474 C8orf86Q6ZUL3 223 aa12.21□□□□□ -0.45
PTPRT-210ENST00000617474 Q8N8P6 123 aa12.21□□□□□ -0.45
PTPRT-210ENST00000617474 WIPF2Q8TF74 440 aaPredicted RBP12.21□□□□□ -0.45
PTPRT-210ENST00000617474 GTSF1Q8WW33 167 aa12.21□□□□□ -0.45
PTPRT-210ENST00000617474 SRSF8Q9BRL6 282 aaKnown RBP12.21□□□□□ -0.45
PTPRT-210ENST00000617474 MSMPQ1L6U9 139 aa12.21□□□□□ -0.45
PTPRT-210ENST00000617474 DEFB125Q8N687 156 aa12.21□□□□□ -0.45
PTPRT-210ENST00000617474 CEP295Q9C0D2 2601 aa12.2□□□□□ -0.46
PTPRT-210ENST00000617474 IGKV1-17P01599 117 aa12.2□□□□□ -0.46
PTPRT-210ENST00000617474 KLF5Q13887 457 aaPredicted RBP12.2□□□□□ -0.46
PTPRT-210ENST00000617474 PRADC1Q9BSG0 188 aa12.2□□□□□ -0.46
PTPRT-210ENST00000617474 DKK4Q9UBT3 224 aa12.2□□□□□ -0.46
PTPRT-210ENST00000617474 SAP30O75446 220 aa12.2□□□□□ -0.46
PTPRT-210ENST00000617474 ZFAND6Q6FIF0 208 aa12.2□□□□□ -0.46
PTPRT-210ENST00000617474 IGF2BP2-AS1Q96M15 143 aa12.2□□□□□ -0.46
PTPRT-210ENST00000617474 PRSS22Q9GZN4 317 aa12.2□□□□□ -0.46
PTPRT-210ENST00000617474 PRSS33Q8NF86 280 aa12.19□□□□□ -0.46
PTPRT-210ENST00000617474 C1orf159Q96HA4 380 aa12.19□□□□□ -0.46
PTPRT-210ENST00000617474 TRGV11A0A075B6L2 103 aa12.19□□□□□ -0.46
PTPRT-210ENST00000617474 C3orf36Q3SXR2 165 aa12.19□□□□□ -0.46
PTPRT-210ENST00000617474 STHQ8IWL8 128 aa12.19□□□□□ -0.46
PTPRT-210ENST00000617474 DYNAPQ8N1N2 210 aa12.19□□□□□ -0.46
PTPRT-210ENST00000617474 TP73-AS1Q9UF72 201 aa12.19□□□□□ -0.46
PTPRT-210ENST00000617474 HTN3P15516 51 aa12.19□□□□□ -0.46
PTPRT-210ENST00000617474 C2orf82Q6UX34 121 aa12.19□□□□□ -0.46
PTPRT-210ENST00000617474 COL4A4P53420 1690 aaPredicted RBP12.19□□□□□ -0.46
PTPRT-210ENST00000617474 LHBP01229 141 aa12.19□□□□□ -0.46
PTPRT-210ENST00000617474 SPINK13Q1W4C9 94 aa12.19□□□□□ -0.46
PTPRT-210ENST00000617474 ANXA2RQ3ZCQ2 193 aa12.19□□□□□ -0.46
PTPRT-210ENST00000617474 IGHV2-70DA0A0C4DH43 119 aa12.18□□□□□ -0.46
PTPRT-210ENST00000617474 GP9P14770 177 aa12.18□□□□□ -0.46
PTPRT-210ENST00000617474 TMEM190Q8WZ59 177 aa12.18□□□□□ -0.46
PTPRT-210ENST00000617474 SYNJ2BPP57105 145 aa12.18□□□□□ -0.46
PTPRT-210ENST00000617474 KLK9Q9UKQ9 250 aa12.18□□□□□ -0.46
PTPRT-210ENST00000617474 HIVEP3Q5T1R4 2406 aa12.18□□□□□ -0.46
PTPRT-210ENST00000617474 TRAV12-2A0A075B6T6 113 aa12.18□□□□□ -0.46
PTPRT-210ENST00000617474 TRAV8-3A0A0A6YYJ7 113 aa12.18□□□□□ -0.46
PTPRT-210ENST00000617474 TRAV13-1A0A0B4J241 112 aa12.18□□□□□ -0.46
PTPRT-210ENST00000617474 A0A1W2PNU3 283 aaPredicted RBP12.18□□□□□ -0.46
PTPRT-210ENST00000617474 F6UB75 175 aa12.18□□□□□ -0.46
PTPRT-210ENST00000617474 FAM110DQ8TAY7 271 aaPredicted RBP12.18□□□□□ -0.46
PTPRT-210ENST00000617474 C11orf68Q9H3H3 251 aaKnown RBP12.18□□□□□ -0.46
PTPRT-210ENST00000617474 UBE2E2Q96LR5 201 aa12.17□□□□□ -0.46
PTPRT-210ENST00000617474 FOXE3Q13461 319 aa12.17□□□□□ -0.46
PTPRT-210ENST00000617474 SMIM2Q9BVW6 85 aa12.17□□□□□ -0.46
PTPRT-210ENST00000617474 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.17□□□□□ -0.46
PTPRT-210ENST00000617474 SDHAF1A6NFY7 115 aa12.17□□□□□ -0.46
PTPRT-210ENST00000617474 GRNP28799 593 aaKnown RBP12.17□□□□□ -0.46
PTPRT-210ENST00000617474 PLEKHB2Q96CS7 222 aa12.17□□□□□ -0.46
PTPRT-210ENST00000617474 DAZ1Q9NQZ3 744 aaKnown RBP12.17□□□□□ -0.46
PTPRT-210ENST00000617474 F8VRH5 84 aa12.16□□□□□ -0.46
PTPRT-210ENST00000617474 CHCHD5Q9BSY4 110 aa12.16□□□□□ -0.46
PTPRT-210ENST00000617474 AGPAT4-IT1Q9H0P7 198 aa12.16□□□□□ -0.46
PTPRT-210ENST00000617474 PIP4P2Q8N4L2 257 aa12.16□□□□□ -0.46
PTPRT-210ENST00000617474 ZNF503Q96F45 646 aa12.16□□□□□ -0.46
PTPRT-210ENST00000617474 HCFC1P51610 2035 aa12.16□□□□□ -0.46
PTPRT-210ENST00000617474 TRGV1A0A0A0MS02 117 aa12.16□□□□□ -0.46
PTPRT-210ENST00000617474 LINC00158P58513 81 aa12.16□□□□□ -0.46
PTPRT-210ENST00000617474 TIMM21Q9BVV7 248 aa12.16□□□□□ -0.46
PTPRT-210ENST00000617474 MYMXA0A1B0GTQ4 84 aa12.15□□□□□ -0.46
PTPRT-210ENST00000617474 ATXN8Q156A1 80 aa12.15□□□□□ -0.46
PTPRT-210ENST00000617474 MAPK1IP1LQ8NDC0 245 aa12.15□□□□□ -0.46
PTPRT-210ENST00000617474 YPEL4Q96NS1 127 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms