RNA–Protein interactions for RNA: ENST00000617310.4

SMARCA1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 2

Gene SMARCA1, Length 4,291 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-205ENST00000617310 DEFB1P60022 68 aa7.97□□□□□ -1.13
SMARCA1-205ENST00000617310 HIST1H2BCP62807 126 aa7.97□□□□□ -1.13
SMARCA1-205ENST00000617310 HIST2H2BEQ16778 126 aa7.97□□□□□ -1.13
SMARCA1-205ENST00000617310 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.97□□□□□ -1.13
SMARCA1-205ENST00000617310 HIST1H2BHQ93079 126 aa7.97□□□□□ -1.13
SMARCA1-205ENST00000617310 HIST1H2BNQ99877 126 aa7.97□□□□□ -1.13
SMARCA1-205ENST00000617310 HIST1H2BMQ99879 126 aa7.97□□□□□ -1.13
SMARCA1-205ENST00000617310 LSM4Q9Y4Z0 139 aaKnown RBP7.97□□□□□ -1.13
SMARCA1-205ENST00000617310 IGHV7-4-1A0A0J9YVY3 117 aa7.97□□□□□ -1.13
SMARCA1-205ENST00000617310 INAFM1C9JVW0 142 aa7.97□□□□□ -1.13
SMARCA1-205ENST00000617310 HBDP02042 147 aa7.97□□□□□ -1.13
SMARCA1-205ENST00000617310 DAD1P61803 113 aa7.97□□□□□ -1.13
SMARCA1-205ENST00000617310 GUSBP1Q15486 140 aa7.97□□□□□ -1.13
SMARCA1-205ENST00000617310 ZNF726P1Q15940 193 aa7.97□□□□□ -1.13
SMARCA1-205ENST00000617310 POU2AF1Q16633 256 aa7.97□□□□□ -1.13
SMARCA1-205ENST00000617310 FAM90A2PQ658T7 463 aa7.97□□□□□ -1.13
SMARCA1-205ENST00000617310 LYPD6Q86Y78 171 aa7.97□□□□□ -1.13
SMARCA1-205ENST00000617310 E7EUB6 86 aa7.97□□□□□ -1.13
SMARCA1-205ENST00000617310 SRSF1Q07955 248 aaKnown RBP eCLIP7.97□□□□□ -1.13
SMARCA1-205ENST00000617310 PDE6HQ13956 83 aa7.97□□□□□ -1.13
SMARCA1-205ENST00000617310 NIT1Q86X76 327 aa7.97□□□□□ -1.13
SMARCA1-205ENST00000617310 LYPD1Q8N2G4 141 aa7.97□□□□□ -1.13
SMARCA1-205ENST00000617310 MRPL27Q9P0M9 148 aaKnown RBP7.97□□□□□ -1.13
SMARCA1-205ENST00000617310 UQCR10Q9UDW1 63 aa7.97□□□□□ -1.13
SMARCA1-205ENST00000617310 TSSC4Q9Y5U2 329 aaPredicted RBP7.97□□□□□ -1.13
SMARCA1-205ENST00000617310 PPBPP02775 128 aa7.96□□□□□ -1.13
SMARCA1-205ENST00000617310 NXT2Q9NPJ8 142 aaKnown RBP7.96□□□□□ -1.13
SMARCA1-205ENST00000617310 TRANK1O15050 2925 aa7.96□□□□□ -1.13
SMARCA1-205ENST00000617310 IGHV3-38A0A0C4DH36 116 aa7.96□□□□□ -1.14
SMARCA1-205ENST00000617310 TMEM238LA0A1B0GVL6 79 aa7.96□□□□□ -1.14
SMARCA1-205ENST00000617310 A6NJY4 79 aa7.96□□□□□ -1.14
SMARCA1-205ENST00000617310 COX6CP09669 75 aa7.96□□□□□ -1.14
SMARCA1-205ENST00000617310 CHD9Q3L8U1 2897 aa7.96□□□□□ -1.14
SMARCA1-205ENST00000617310 IGKV1-17P01599 117 aa7.96□□□□□ -1.14
SMARCA1-205ENST00000617310 LYL1P12980 280 aa7.96□□□□□ -1.14
SMARCA1-205ENST00000617310 SLC25A2Q9BXI2 301 aa7.96□□□□□ -1.14
SMARCA1-205ENST00000617310 CSTL1Q9H114 145 aa7.96□□□□□ -1.14
SMARCA1-205ENST00000617310 DPH3P1Q9H4G8 78 aa7.96□□□□□ -1.14
SMARCA1-205ENST00000617310 NCKAP5O14513 1909 aa7.96□□□□□ -1.14
SMARCA1-205ENST00000617310 FNDC10F2Z333 226 aa7.95□□□□□ -1.14
SMARCA1-205ENST00000617310 H3BRM9 83 aa7.95□□□□□ -1.14
SMARCA1-205ENST00000617310 ANXA2RQ3ZCQ2 193 aa7.95□□□□□ -1.14
SMARCA1-205ENST00000617310 ERASQ7Z444 233 aa7.95□□□□□ -1.14
SMARCA1-205ENST00000617310 SMPXQ9UHP9 88 aa7.95□□□□□ -1.14
SMARCA1-205ENST00000617310 KIAA1549Q9HCM3 1950 aa7.95□□□□□ -1.14
SMARCA1-205ENST00000617310 PSCAO43653 123 aa7.95□□□□□ -1.14
SMARCA1-205ENST00000617310 TMEM256Q8N2U0 113 aa7.95□□□□□ -1.14
SMARCA1-205ENST00000617310 TMEM170AQ8WVE7 144 aa7.95□□□□□ -1.14
SMARCA1-205ENST00000617310 IFI27L1Q96BM0 104 aa7.95□□□□□ -1.14
SMARCA1-205ENST00000617310 LINC01548A6NM66 108 aa7.95□□□□□ -1.14
SMARCA1-205ENST00000617310 K7EIM0 57 aa7.95□□□□□ -1.14
SMARCA1-205ENST00000617310 CDKN1BP46527 198 aa7.95□□□□□ -1.14
SMARCA1-205ENST00000617310 TTC9CQ8N5M4 171 aa7.95□□□□□ -1.14
SMARCA1-205ENST00000617310 MS4A6AQ9H2W1 248 aa7.95□□□□□ -1.14
SMARCA1-205ENST00000617310 LGALS1P09382 135 aaKnown RBP7.95□□□□□ -1.14
SMARCA1-205ENST00000617310 CTAG1AP78358 180 aa7.95□□□□□ -1.14
SMARCA1-205ENST00000617310 NEGR1Q7Z3B1 354 aa7.95□□□□□ -1.14
SMARCA1-205ENST00000617310 ZNF114Q8NC26 417 aa7.95□□□□□ -1.14
SMARCA1-205ENST00000617310 C5orf30Q96GV9 206 aa7.95□□□□□ -1.14
SMARCA1-205ENST00000617310 ALKBH7Q9BT30 221 aaPredicted RBP7.95□□□□□ -1.14
SMARCA1-205ENST00000617310 ESM1Q9NQ30 184 aa7.95□□□□□ -1.14
SMARCA1-205ENST00000617310 SETXQ7Z333 2677 aaKnown RBP7.95□□□□□ -1.14
SMARCA1-205ENST00000617310 H3BRN7 92 aa7.94□□□□□ -1.14
SMARCA1-205ENST00000617310 NPC2P61916 151 aa7.94□□□□□ -1.14
SMARCA1-205ENST00000617310 PRR25Q96S07 402 aa7.94□□□□□ -1.14
SMARCA1-205ENST00000617310 CITED2Q99967 270 aaPredicted RBP7.94□□□□□ -1.14
SMARCA1-205ENST00000617310 ZNF106Q9H2Y7 1883 aaKnown RBP7.94□□□□□ -1.14
SMARCA1-205ENST00000617310 C5orf56Q8N8D9 126 aa7.94□□□□□ -1.14
SMARCA1-205ENST00000617310 IGHV4OR15-8A0A075B7B6 117 aa7.94□□□□□ -1.14
SMARCA1-205ENST00000617310 A0A087WW49 117 aa7.94□□□□□ -1.14
SMARCA1-205ENST00000617310 C10orf142B7Z368 130 aa7.94□□□□□ -1.14
SMARCA1-205ENST00000617310 ORMDL2Q53FV1 153 aa7.94□□□□□ -1.14
SMARCA1-205ENST00000617310 SIRPDQ9H106 197 aa7.94□□□□□ -1.14
SMARCA1-205ENST00000617310 PFN1P07737 140 aaKnown RBP7.93□□□□□ -1.14
SMARCA1-205ENST00000617310 MRPL16Q9NX20 251 aaKnown RBP7.93□□□□□ -1.14
SMARCA1-205ENST00000617310 MRPL36Q9P0J6 103 aaKnown RBP7.93□□□□□ -1.14
SMARCA1-205ENST00000617310 TNRC18O15417 2968 aaPredicted RBP7.93□□□□□ -1.14
SMARCA1-205ENST00000617310 TRAV9-1A0A075B6T8 112 aa7.93□□□□□ -1.14
SMARCA1-205ENST00000617310 IGHV1OR15-1A0A075B7D0 117 aa7.93□□□□□ -1.14
SMARCA1-205ENST00000617310 A0A0J9YY99 117 aa7.93□□□□□ -1.14
SMARCA1-205ENST00000617310 A0A1B0GUS0 222 aa7.93□□□□□ -1.14
SMARCA1-205ENST00000617310 ADCYAP1P18509 176 aa7.93□□□□□ -1.14
SMARCA1-205ENST00000617310 C1orf194Q5T5A4 169 aa7.93□□□□□ -1.14
SMARCA1-205ENST00000617310 MORN5Q5VZ52 161 aa7.93□□□□□ -1.14
SMARCA1-205ENST00000617310 OR5A1Q8NGJ0 315 aa7.93□□□□□ -1.14
SMARCA1-205ENST00000617310 SMIM12Q96EX1 92 aa7.93□□□□□ -1.14
SMARCA1-205ENST00000617310 GNB1LQ9BYB4 327 aa7.93□□□□□ -1.14
SMARCA1-205ENST00000617310 TRAV26-2A0A0B4J265 109 aa7.93□□□□□ -1.14
SMARCA1-205ENST00000617310 DYNAPQ8N1N2 210 aa7.93□□□□□ -1.14
SMARCA1-205ENST00000617310 GSN-AS1Q9NRJ2 163 aa7.93□□□□□ -1.14
SMARCA1-205ENST00000617310 CTSGP08311 255 aa7.92□□□□□ -1.14
SMARCA1-205ENST00000617310 Q6ZSR3 168 aa7.92□□□□□ -1.14
SMARCA1-205ENST00000617310 TRBV24-1A0A075B6N3 115 aa7.92□□□□□ -1.14
SMARCA1-205ENST00000617310 TRBV7-9A0A0J9YWB2 115 aa7.92□□□□□ -1.14
SMARCA1-205ENST00000617310 PROP1O75360 226 aa7.92□□□□□ -1.14
SMARCA1-205ENST00000617310 TRBV12-3P01733 135 aa7.92□□□□□ -1.14
SMARCA1-205ENST00000617310 DDTP30046 118 aa7.92□□□□□ -1.14
SMARCA1-205ENST00000617310 KRTAP10-9P60411 292 aa7.92□□□□□ -1.14
SMARCA1-205ENST00000617310 FOXE3Q13461 319 aa7.92□□□□□ -1.14
SMARCA1-205ENST00000617310 COL5A1-AS1Q5SY13 56 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms