RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 E7EQL1 145 aa11.56□□□□□ -0.56
VPS36-207ENST00000611132 CD28P10747 220 aa11.56□□□□□ -0.56
VPS36-207ENST00000611132 FOXI2Q6ZQN5 318 aa11.56□□□□□ -0.56
VPS36-207ENST00000611132 Q8N7P7 452 aa11.56□□□□□ -0.56
VPS36-207ENST00000611132 YAE1D1Q9NRH1 226 aa11.56□□□□□ -0.56
VPS36-207ENST00000611132 HIGD1BQ9P298 99 aa11.56□□□□□ -0.56
VPS36-207ENST00000611132 OR11H6Q8NGC7 330 aa11.55□□□□□ -0.56
VPS36-207ENST00000611132 TTTY13Q9BZ97 58 aa11.55□□□□□ -0.56
VPS36-207ENST00000611132 TRBV7-1A0A0A6YYK4 115 aa11.55□□□□□ -0.56
VPS36-207ENST00000611132 TMEM95Q3KNT9 176 aa11.55□□□□□ -0.56
VPS36-207ENST00000611132 M0R2P5 195 aa11.55□□□□□ -0.56
VPS36-207ENST00000611132 C2orf82Q6UX34 121 aa11.55□□□□□ -0.56
VPS36-207ENST00000611132 TRAV41A0A0B4J266 112 aa11.55□□□□□ -0.56
VPS36-207ENST00000611132 THBDP07204 575 aa11.55□□□□□ -0.56
VPS36-207ENST00000611132 MLST8Q9BVC4 326 aa11.55□□□□□ -0.56
VPS36-207ENST00000611132 WFDC2Q14508 124 aa11.54□□□□□ -0.56
VPS36-207ENST00000611132 KAAG1Q9UBP8 84 aa11.54□□□□□ -0.56
VPS36-207ENST00000611132 IGKV1D-37A0A075B6S9 117 aa11.54□□□□□ -0.56
VPS36-207ENST00000611132 CGB3P0DN86 165 aa11.54□□□□□ -0.56
VPS36-207ENST00000611132 CGB7P0DN87 165 aa11.54□□□□□ -0.56
VPS36-207ENST00000611132 GATA1P15976 413 aaPredicted RBP11.54□□□□□ -0.56
VPS36-207ENST00000611132 TP53TG1Q9Y2A0 90 aa11.54□□□□□ -0.56
VPS36-207ENST00000611132 NCKAP5O14513 1909 aa11.53□□□□□ -0.56
VPS36-207ENST00000611132 I3L2K1 104 aa11.53□□□□□ -0.56
VPS36-207ENST00000611132 UBE2L6O14933 153 aa11.53□□□□□ -0.56
VPS36-207ENST00000611132 Q8N976 141 aa11.53□□□□□ -0.56
VPS36-207ENST00000611132 WFDC12Q8WWY7 111 aa11.53□□□□□ -0.56
VPS36-207ENST00000611132 HLA-DMBP28068 263 aa11.53□□□□□ -0.56
VPS36-207ENST00000611132 MSRB1Q9NZV6 116 aa11.53□□□□□ -0.56
VPS36-207ENST00000611132 CTSZQ9UBR2 303 aa11.53□□□□□ -0.56
VPS36-207ENST00000611132 TRAV12-3A0A0B4J271 114 aa11.52□□□□□ -0.56
VPS36-207ENST00000611132 RITA1Q96K30 269 aa11.52□□□□□ -0.56
VPS36-207ENST00000611132 DUX5Q96PT3 197 aa11.52□□□□□ -0.56
VPS36-207ENST00000611132 FAM215AQ9Y5M1 114 aa11.52□□□□□ -0.56
VPS36-207ENST00000611132 SRD5A1P18405 259 aa11.52□□□□□ -0.57
VPS36-207ENST00000611132 PMVKQ15126 192 aa11.52□□□□□ -0.57
VPS36-207ENST00000611132 ZNF876PQ49A33 203 aa11.52□□□□□ -0.57
VPS36-207ENST00000611132 UTF1Q5T230 341 aa11.52□□□□□ -0.57
VPS36-207ENST00000611132 IGHV3OR16-12A0A075B7B8 117 aa11.52□□□□□ -0.57
VPS36-207ENST00000611132 K7EIM0 57 aa11.52□□□□□ -0.57
VPS36-207ENST00000611132 C10orf142B7Z368 130 aa11.51□□□□□ -0.57
VPS36-207ENST00000611132 LY6HO94772 140 aa11.51□□□□□ -0.57
VPS36-207ENST00000611132 CRYGCP07315 174 aa11.51□□□□□ -0.57
VPS36-207ENST00000611132 C1orf229Q6ZS94 237 aaPredicted RBP11.51□□□□□ -0.57
VPS36-207ENST00000611132 TRBV6-1A0A0K0K1D8 114 aa11.51□□□□□ -0.57
VPS36-207ENST00000611132 DYNAPQ8N1N2 210 aa11.51□□□□□ -0.57
VPS36-207ENST00000611132 FAM110DQ8TAY7 271 aaPredicted RBP11.51□□□□□ -0.57
VPS36-207ENST00000611132 IGLV2-23P01705 113 aa11.51□□□□□ -0.57
VPS36-207ENST00000611132 LOXL1Q08397 574 aaPredicted RBP11.51□□□□□ -0.57
VPS36-207ENST00000611132 DUX3Q96PT4 197 aa11.51□□□□□ -0.57
VPS36-207ENST00000611132 PRO1854Q9UHT4 67 aa11.51□□□□□ -0.57
VPS36-207ENST00000611132 CPAMD8Q8IZJ3 1885 aa11.51□□□□□ -0.57
VPS36-207ENST00000611132 DNAH12Q6ZR08 3092 aa11.5□□□□□ -0.57
VPS36-207ENST00000611132 A0A087WWL8 130 aa11.5□□□□□ -0.57
VPS36-207ENST00000611132 UCNP55089 124 aa11.5□□□□□ -0.57
VPS36-207ENST00000611132 MSMPQ1L6U9 139 aa11.5□□□□□ -0.57
VPS36-207ENST00000611132 PIMREGQ9BSJ6 248 aa11.5□□□□□ -0.57
VPS36-207ENST00000611132 C8orf86Q6ZUL3 223 aa11.5□□□□□ -0.57
VPS36-207ENST00000611132 IGKV3D-20A0A0C4DH25 116 aa11.5□□□□□ -0.57
VPS36-207ENST00000611132 C1orf122Q6ZSJ8 110 aa11.5□□□□□ -0.57
VPS36-207ENST00000611132 K7EMI3 77 aa11.5□□□□□ -0.57
VPS36-207ENST00000611132 TMEM219Q86XT9 240 aa11.5□□□□□ -0.57
VPS36-207ENST00000611132 C20orf78Q9BR46 151 aa11.5□□□□□ -0.57
VPS36-207ENST00000611132 MOB4Q9Y3A3 225 aa11.5□□□□□ -0.57
VPS36-207ENST00000611132 ZNF493Q6ZR52 646 aa11.49□□□□□ -0.57
VPS36-207ENST00000611132 TMEM141Q96I45 108 aa11.49□□□□□ -0.57
VPS36-207ENST00000611132 KIAA1549Q9HCM3 1950 aa11.49□□□□□ -0.57
VPS36-207ENST00000611132 ZNF688P0C7X2 276 aa11.49□□□□□ -0.57
VPS36-207ENST00000611132 ODF1Q14990 250 aa11.49□□□□□ -0.57
VPS36-207ENST00000611132 AGPAT4-IT1Q9H0P7 198 aa11.49□□□□□ -0.57
VPS36-207ENST00000611132 DUSP14O95147 198 aaKnown RBP11.48□□□□□ -0.57
VPS36-207ENST00000611132 NPC2P61916 151 aa11.48□□□□□ -0.57
VPS36-207ENST00000611132 CFHR4Q92496 578 aa11.48□□□□□ -0.57
VPS36-207ENST00000611132 PRSS29PA6NIE9 313 aa11.48□□□□□ -0.57
VPS36-207ENST00000611132 ZNF48Q96MX3 618 aaPredicted RBP11.48□□□□□ -0.57
VPS36-207ENST00000611132 DKK4Q9UBT3 224 aa11.48□□□□□ -0.57
VPS36-207ENST00000611132 ATP6V0E1O15342 81 aa11.48□□□□□ -0.57
VPS36-207ENST00000611132 CENPFP49454 3210 aa11.48□□□□□ -0.57
VPS36-207ENST00000611132 TRGV11A0A075B6L2 103 aa11.48□□□□□ -0.57
VPS36-207ENST00000611132 A0A0U1RRA0 63 aa11.48□□□□□ -0.57
VPS36-207ENST00000611132 OR13C6PQ8NH95 151 aa11.48□□□□□ -0.57
VPS36-207ENST00000611132 TIMM21Q9BVV7 248 aa11.47□□□□□ -0.57
VPS36-207ENST00000611132 C1QTNF4Q9BXJ3 329 aa11.47□□□□□ -0.57
VPS36-207ENST00000611132 SLC25A20O43772 301 aa11.47□□□□□ -0.57
VPS36-207ENST00000611132 FCN3O75636 299 aa11.47□□□□□ -0.57
VPS36-207ENST00000611132 FGF6P10767 208 aa11.47□□□□□ -0.57
VPS36-207ENST00000611132 SPXQ9BT56 116 aa11.47□□□□□ -0.57
VPS36-207ENST00000611132 IGKV3OR2-268A0A0C4DH90 116 aa11.47□□□□□ -0.57
VPS36-207ENST00000611132 PRSS33Q8NF86 280 aa11.47□□□□□ -0.57
VPS36-207ENST00000611132 NEGR1Q7Z3B1 354 aa11.46□□□□□ -0.57
VPS36-207ENST00000611132 SPRY4Q9C004 299 aa11.46□□□□□ -0.57
VPS36-207ENST00000611132 SDHAF1A6NFY7 115 aa11.46□□□□□ -0.57
VPS36-207ENST00000611132 ANXA2RQ3ZCQ2 193 aa11.46□□□□□ -0.57
VPS36-207ENST00000611132 C1orf159Q96HA4 380 aa11.46□□□□□ -0.57
VPS36-207ENST00000611132 SPANXA1Q9NS26 97 aa11.46□□□□□ -0.57
VPS36-207ENST00000611132 TEX22C9J3V5 150 aa11.46□□□□□ -0.58
VPS36-207ENST00000611132 H3BMM0 161 aa11.45□□□□□ -0.58
VPS36-207ENST00000611132 TCF15Q12870 199 aa11.45□□□□□ -0.58
VPS36-207ENST00000611132 UBE2WQ96B02 151 aa11.45□□□□□ -0.58
VPS36-207ENST00000611132 RHPN1-AS1Q9BWJ2 59 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms