RNA–Protein interactions for RNA: ENST00000609021.1

HDDC2-208, Transcript of HD domain containing 2, humanhuman

Gene HDDC2, Length 3,529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-208ENST00000609021 NDUFA11Q86Y39 141 aa3.69□□□□□ -1.82
HDDC2-208ENST00000609021 ZNF799Q96GE5 643 aa3.69□□□□□ -1.82
HDDC2-208ENST00000609021 IGLV3-10A0A075B6K4 115 aa3.69□□□□□ -1.82
HDDC2-208ENST00000609021 TRAV40A0A0B4J280 105 aa3.69□□□□□ -1.82
HDDC2-208ENST00000609021 TRBV5-4A0A0C4DH59 114 aa3.69□□□□□ -1.82
HDDC2-208ENST00000609021 C10orf142B7Z368 130 aa3.69□□□□□ -1.82
HDDC2-208ENST00000609021 BGLAPP02818 100 aa3.69□□□□□ -1.82
HDDC2-208ENST00000609021 INAFM2P0DMQ5 153 aa3.69□□□□□ -1.82
HDDC2-208ENST00000609021 P0DMU3 169 aa3.69□□□□□ -1.82
HDDC2-208ENST00000609021 FAM231AP0DMU4 169 aa3.69□□□□□ -1.82
HDDC2-208ENST00000609021 FAM231CP0DMU5 169 aa3.69□□□□□ -1.82
HDDC2-208ENST00000609021 CCL1P22362 96 aa3.69□□□□□ -1.82
HDDC2-208ENST00000609021 CD70P32970 193 aa3.69□□□□□ -1.82
HDDC2-208ENST00000609021 TANC2Q9HCD6 1990 aa3.69□□□□□ -1.82
HDDC2-208ENST00000609021 TRBV7-3A0A075B6L6 115 aa3.69□□□□□ -1.82
HDDC2-208ENST00000609021 SMKR1H3BMG3 65 aa3.69□□□□□ -1.82
HDDC2-208ENST00000609021 HIST1H4AP62805 103 aaKnown RBP3.69□□□□□ -1.82
HDDC2-208ENST00000609021 ZNF818PQ6ZRF7 136 aa3.69□□□□□ -1.82
HDDC2-208ENST00000609021 C9orf139Q6ZV77 190 aa3.69□□□□□ -1.82
HDDC2-208ENST00000609021 MKXQ8IYA7 352 aa3.69□□□□□ -1.82
HDDC2-208ENST00000609021 SLC25A29Q8N8R3 303 aa3.69□□□□□ -1.82
HDDC2-208ENST00000609021 PRO3102Q9H379 93 aa3.69□□□□□ -1.82
HDDC2-208ENST00000609021 RPP21Q9H633 154 aaKnown RBP3.69□□□□□ -1.82
HDDC2-208ENST00000609021 FREM2Q5SZK8 3169 aa3.69□□□□□ -1.82
HDDC2-208ENST00000609021 PCNX3Q9H6A9 2034 aa3.68□□□□□ -1.82
HDDC2-208ENST00000609021 THADAQ6YHU6 1953 aa3.68□□□□□ -1.82
HDDC2-208ENST00000609021 A0A1B0GUT8 65 aa3.68□□□□□ -1.82
HDDC2-208ENST00000609021 SS18L1O75177 396 aaPredicted RBP3.68□□□□□ -1.82
HDDC2-208ENST00000609021 NDUFA3O95167 84 aa3.68□□□□□ -1.82
HDDC2-208ENST00000609021 CFC1BP0CG36 223 aa3.68□□□□□ -1.82
HDDC2-208ENST00000609021 CFC1P0CG37 223 aa3.68□□□□□ -1.82
HDDC2-208ENST00000609021 COL8A2P25067 703 aa3.68□□□□□ -1.82
HDDC2-208ENST00000609021 CKS2P33552 79 aa3.68□□□□□ -1.82
HDDC2-208ENST00000609021 FXYD7P58549 80 aa3.68□□□□□ -1.82
HDDC2-208ENST00000609021 KISS1Q15726 138 aa3.68□□□□□ -1.82
HDDC2-208ENST00000609021 FANCD2OSQ96PS1 177 aa3.68□□□□□ -1.82
HDDC2-208ENST00000609021 SMIM14Q96QK8 99 aa3.68□□□□□ -1.82
HDDC2-208ENST00000609021 SRXN1Q9BYN0 137 aa3.68□□□□□ -1.82
HDDC2-208ENST00000609021 SHANK1Q9Y566 2161 aa3.68□□□□□ -1.82
HDDC2-208ENST00000609021 A0A0D9SEW6 157 aa3.68□□□□□ -1.82
HDDC2-208ENST00000609021 TRBV7-6A0A0J9YX20 115 aa3.68□□□□□ -1.82
HDDC2-208ENST00000609021 LINC01619G3V211 115 aa3.68□□□□□ -1.82
HDDC2-208ENST00000609021 AVPP01185 164 aa3.68□□□□□ -1.82
HDDC2-208ENST00000609021 IFI6P09912 130 aa3.68□□□□□ -1.82
HDDC2-208ENST00000609021 ERCC8Q13216 396 aa3.68□□□□□ -1.82
HDDC2-208ENST00000609021 FAM223AQ8IWN6 122 aa3.68□□□□□ -1.82
HDDC2-208ENST00000609021 PRR26Q8N8Z3 221 aa3.68□□□□□ -1.82
HDDC2-208ENST00000609021 ZNF576Q9H609 170 aa3.68□□□□□ -1.82
HDDC2-208ENST00000609021 C19orf71A6NCJ1 209 aa3.67□□□□□ -1.82
HDDC2-208ENST00000609021 M0R3E3 92 aa3.67□□□□□ -1.82
HDDC2-208ENST00000609021 PLNP26678 52 aa3.67□□□□□ -1.82
HDDC2-208ENST00000609021 CRIP2P52943 208 aaPredicted RBP3.67□□□□□ -1.82
HDDC2-208ENST00000609021 CFHR3Q02985 330 aa3.67□□□□□ -1.82
HDDC2-208ENST00000609021 ORMDL3Q8N138 153 aa3.67□□□□□ -1.82
HDDC2-208ENST00000609021 CCL28Q9NRJ3 127 aa3.67□□□□□ -1.82
HDDC2-208ENST00000609021 NDUFS5O43920 106 aa3.67□□□□□ -1.82
HDDC2-208ENST00000609021 IGLV3-27P01718 113 aa3.67□□□□□ -1.82
HDDC2-208ENST00000609021 UBE2D1P51668 147 aa3.67□□□□□ -1.82
HDDC2-208ENST00000609021 PRR20EP86478 221 aa3.67□□□□□ -1.82
HDDC2-208ENST00000609021 PRR20CP86479 221 aa3.67□□□□□ -1.82
HDDC2-208ENST00000609021 PRR20DP86480 221 aa3.67□□□□□ -1.82
HDDC2-208ENST00000609021 PRR20BP86481 221 aa3.67□□□□□ -1.82
HDDC2-208ENST00000609021 PRR20AP86496 221 aa3.67□□□□□ -1.82
HDDC2-208ENST00000609021 RUSC1-AS1Q66K80 236 aa3.67□□□□□ -1.82
HDDC2-208ENST00000609021 CXCL17Q6UXB2 119 aa3.67□□□□□ -1.82
HDDC2-208ENST00000609021 J3QT63 122 aa3.67□□□□□ -1.82
HDDC2-208ENST00000609021 CCKP06307 115 aa3.67□□□□□ -1.82
HDDC2-208ENST00000609021 ATP5EP56381 51 aaPredicted RBP3.67□□□□□ -1.82
HDDC2-208ENST00000609021 C5orf38Q86SI9 138 aa3.67□□□□□ -1.82
HDDC2-208ENST00000609021 KTN1-AS1Q86SY8 53 aa3.67□□□□□ -1.82
HDDC2-208ENST00000609021 MAPKAPK5-AS1Q8N8E1 139 aa3.67□□□□□ -1.82
HDDC2-208ENST00000609021 FXYD5Q96DB9 178 aa3.67□□□□□ -1.82
HDDC2-208ENST00000609021 MAP1BP46821 2468 aaKnown RBP3.67□□□□□ -1.82
HDDC2-208ENST00000609021 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.66□□□□□ -1.82
HDDC2-208ENST00000609021 A0A1B0GXF2 115 aa3.66□□□□□ -1.82
HDDC2-208ENST00000609021 TMEM30CPA0ZSE6 113 aa3.66□□□□□ -1.82
HDDC2-208ENST00000609021 FOXS1O43638 330 aa3.66□□□□□ -1.82
HDDC2-208ENST00000609021 DNAL4O96015 105 aa3.66□□□□□ -1.82
HDDC2-208ENST00000609021 GHRHP01286 108 aa3.66□□□□□ -1.82
HDDC2-208ENST00000609021 PRSS2P07478 247 aa3.66□□□□□ -1.82
HDDC2-208ENST00000609021 FAM222AQ5U5X8 452 aa3.66□□□□□ -1.82
HDDC2-208ENST00000609021 SOSTDC1Q6X4U4 206 aa3.66□□□□□ -1.82
HDDC2-208ENST00000609021 DCANP1Q8TF63 244 aa3.66□□□□□ -1.82
HDDC2-208ENST00000609021 CYSTM1Q9H1C7 97 aa3.66□□□□□ -1.82
HDDC2-208ENST00000609021 LINC00474Q9P2X8 69 aa3.66□□□□□ -1.82
HDDC2-208ENST00000609021 KMT2EQ8IZD2 1858 aa3.66□□□□□ -1.82
HDDC2-208ENST00000609021 TRAV8-3A0A0A6YYJ7 113 aa3.66□□□□□ -1.82
HDDC2-208ENST00000609021 A0A1W2PQD3 144 aa3.66□□□□□ -1.82
HDDC2-208ENST00000609021 TMEM256-PLSCR3K7ERE1 68 aa3.66□□□□□ -1.82
HDDC2-208ENST00000609021 IGKV1D-16P01601 117 aa3.66□□□□□ -1.82
HDDC2-208ENST00000609021 PRB4P10163 310 aaPredicted RBP3.66□□□□□ -1.82
HDDC2-208ENST00000609021 FHL2Q14192 279 aa3.66□□□□□ -1.82
HDDC2-208ENST00000609021 FP248Q71RG6 208 aaPredicted RBP3.66□□□□□ -1.82
HDDC2-208ENST00000609021 PI4KAP42356 2102 aa3.66□□□□□ -1.82
HDDC2-208ENST00000609021 KNL1Q8NG31 2342 aa3.66□□□□□ -1.82
HDDC2-208ENST00000609021 TRBV7-1A0A0A6YYK4 115 aa3.66□□□□□ -1.82
HDDC2-208ENST00000609021 TRBV27A0A0K0K1C4 114 aa3.66□□□□□ -1.82
HDDC2-208ENST00000609021 XCL1P47992 114 aa3.66□□□□□ -1.82
HDDC2-208ENST00000609021 SDIM1Q6ZPB5 146 aa3.66□□□□□ -1.82
HDDC2-208ENST00000609021 SFTPA2Q8IWL1 248 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 117.3 ms