RNA–Protein interactions for RNA: ENST00000606782.1

CTSA-213, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-213ENST00000606782 DKK2Q9UBU2 259 aa9.52□□□□□ -0.89
CTSA-213ENST00000606782 IFNA1P01562 189 aa9.51□□□□□ -0.89
CTSA-213ENST00000606782 IGLV2-11P01706 119 aa9.51□□□□□ -0.89
CTSA-213ENST00000606782 TAGLN2P37802 199 aaKnown RBP9.51□□□□□ -0.89
CTSA-213ENST00000606782 ZNF138P52744 262 aa9.51□□□□□ -0.89
CTSA-213ENST00000606782 TMEM78Q5T7P6 136 aa9.51□□□□□ -0.89
CTSA-213ENST00000606782 PCNPQ8WW12 178 aaKnown RBP9.51□□□□□ -0.89
CTSA-213ENST00000606782 FAM210BQ96KR6 192 aa9.51□□□□□ -0.89
CTSA-213ENST00000606782 ATG101Q9BSB4 218 aa9.51□□□□□ -0.89
CTSA-213ENST00000606782 VAX2Q9UIW0 290 aa9.51□□□□□ -0.89
CTSA-213ENST00000606782 GOLT1BQ9Y3E0 138 aa9.51□□□□□ -0.89
CTSA-213ENST00000606782 KLF12Q9Y4X4 402 aa9.51□□□□□ -0.89
CTSA-213ENST00000606782 TRBV7-9A0A0J9YWB2 115 aa9.5□□□□□ -0.89
CTSA-213ENST00000606782 RBFOX3A6NFN3 312 aa9.5□□□□□ -0.89
CTSA-213ENST00000606782 FBLL1A6NHQ2 334 aaKnown RBP9.5□□□□□ -0.89
CTSA-213ENST00000606782 F6UZH7 168 aa9.5□□□□□ -0.89
CTSA-213ENST00000606782 K7EQM0 130 aa9.5□□□□□ -0.89
CTSA-213ENST00000606782 PEX7O00628 323 aa9.5□□□□□ -0.89
CTSA-213ENST00000606782 CRXO43186 299 aaPredicted RBP9.5□□□□□ -0.89
CTSA-213ENST00000606782 BCL2P10415 239 aa9.5□□□□□ -0.89
CTSA-213ENST00000606782 CYB561D1Q8N8Q1 229 aa9.5□□□□□ -0.89
CTSA-213ENST00000606782 IGF2BP2-AS1Q96M15 143 aa9.5□□□□□ -0.89
CTSA-213ENST00000606782 LINC00479Q96M42 142 aa9.5□□□□□ -0.89
CTSA-213ENST00000606782 NDUFAF3Q9BU61 184 aa9.5□□□□□ -0.89
CTSA-213ENST00000606782 RPH3ALQ9UNE2 315 aa9.5□□□□□ -0.89
CTSA-213ENST00000606782 LENEPQ9Y5L5 61 aa9.5□□□□□ -0.89
CTSA-213ENST00000606782 HECTD4Q9Y4D8 3996 aa9.5□□□□□ -0.89
CTSA-213ENST00000606782 IGHV3OR16-12A0A075B7B8 117 aa9.49□□□□□ -0.89
CTSA-213ENST00000606782 TRAV8-1A0A0A6YYK1 113 aa9.49□□□□□ -0.89
CTSA-213ENST00000606782 LOC102723971A0A1B0GUV8 181 aa9.49□□□□□ -0.89
CTSA-213ENST00000606782 P0DMU3 169 aa9.49□□□□□ -0.89
CTSA-213ENST00000606782 FAM231AP0DMU4 169 aa9.49□□□□□ -0.89
CTSA-213ENST00000606782 FAM231CP0DMU5 169 aa9.49□□□□□ -0.89
CTSA-213ENST00000606782 CRISP2P16562 243 aa9.49□□□□□ -0.89
CTSA-213ENST00000606782 TSPOP30536 169 aa9.49□□□□□ -0.89
CTSA-213ENST00000606782 CDKN1BP46527 198 aa9.49□□□□□ -0.89
CTSA-213ENST00000606782 MEF2BQ02080 365 aaPredicted RBP9.49□□□□□ -0.89
CTSA-213ENST00000606782 FAM222AQ5U5X8 452 aa9.49□□□□□ -0.89
CTSA-213ENST00000606782 POM121L12Q8N7R1 296 aa9.49□□□□□ -0.89
CTSA-213ENST00000606782 TMEM75Q8N9X5 138 aa9.49□□□□□ -0.89
CTSA-213ENST00000606782 NIPSNAP3BQ9BS92 247 aa9.49□□□□□ -0.89
CTSA-213ENST00000606782 PSG8Q9UQ74 426 aa9.49□□□□□ -0.89
CTSA-213ENST00000606782 TRBV6-1A0A0K0K1D8 114 aa9.48□□□□□ -0.89
CTSA-213ENST00000606782 M0R2Z0 102 aa9.48□□□□□ -0.89
CTSA-213ENST00000606782 NDUFS6O75380 124 aaKnown RBP9.48□□□□□ -0.89
CTSA-213ENST00000606782 LEPP41159 167 aa9.48□□□□□ -0.89
CTSA-213ENST00000606782 EMP1P54849 157 aa9.48□□□□□ -0.89
CTSA-213ENST00000606782 RAB14P61106 215 aa9.48□□□□□ -0.89
CTSA-213ENST00000606782 KIR3DS1Q14943 382 aa9.48□□□□□ -0.89
CTSA-213ENST00000606782 SPINK13Q1W4C9 94 aa9.48□□□□□ -0.89
CTSA-213ENST00000606782 RRN3P1Q2M238 152 aa9.48□□□□□ -0.89
CTSA-213ENST00000606782 ZNF506Q5JVG8 444 aa9.48□□□□□ -0.89
CTSA-213ENST00000606782 CLLU1Q5K131 121 aa9.48□□□□□ -0.89
CTSA-213ENST00000606782 TVP23CQ96ET8 276 aa9.48□□□□□ -0.89
CTSA-213ENST00000606782 SGK494Q96LW2 274 aa9.48□□□□□ -0.89
CTSA-213ENST00000606782 FAM210AQ96ND0 272 aa9.48□□□□□ -0.89
CTSA-213ENST00000606782 TRAV34A0A0B4J273 112 aa9.47□□□□□ -0.89
CTSA-213ENST00000606782 SCO2A0A1W2PP80 73 aa9.47□□□□□ -0.89
CTSA-213ENST00000606782 KLLNB2CW77 178 aa9.47□□□□□ -0.89
CTSA-213ENST00000606782 PDE6DO43924 150 aa9.47□□□□□ -0.89
CTSA-213ENST00000606782 S100A9P06702 114 aaKnown RBP9.47□□□□□ -0.89
CTSA-213ENST00000606782 FLI1Q01543 452 aaPredicted RBP9.47□□□□□ -0.89
CTSA-213ENST00000606782 TMEM183BQ1AE95 376 aa9.47□□□□□ -0.89
CTSA-213ENST00000606782 ZFAND2AQ8N6M9 145 aa9.47□□□□□ -0.89
CTSA-213ENST00000606782 C11orf52Q96A22 123 aa9.47□□□□□ -0.89
CTSA-213ENST00000606782 TRAV12-2A0A075B6T6 113 aa9.46□□□□□ -0.9
CTSA-213ENST00000606782 RGS13O14921 159 aa9.46□□□□□ -0.9
CTSA-213ENST00000606782 ZNF324O75467 553 aaPredicted RBP9.46□□□□□ -0.9
CTSA-213ENST00000606782 LINC00336Q6ZUF6 198 aa9.46□□□□□ -0.9
CTSA-213ENST00000606782 Q8TAT8 98 aa9.46□□□□□ -0.9
CTSA-213ENST00000606782 FMC1Q96HJ9 113 aa9.46□□□□□ -0.9
CTSA-213ENST00000606782 GPX1P07203 203 aa9.45□□□□□ -0.9
CTSA-213ENST00000606782 SAPCD1Q5SSQ6 148 aa9.45□□□□□ -0.9
CTSA-213ENST00000606782 GFI1BQ5VTD9 330 aa9.45□□□□□ -0.9
CTSA-213ENST00000606782 COX8CQ7Z4L0 72 aa9.45□□□□□ -0.9
CTSA-213ENST00000606782 PRNTQ86SH4 94 aa9.45□□□□□ -0.9
CTSA-213ENST00000606782 C20orf144Q9BQM9 153 aa9.45□□□□□ -0.9
CTSA-213ENST00000606782 EIF5A2Q9GZV4 153 aaKnown RBP9.45□□□□□ -0.9
CTSA-213ENST00000606782 TREM1Q9NP99 234 aa9.45□□□□□ -0.9
CTSA-213ENST00000606782 ZFP30Q9Y2G7 519 aa9.45□□□□□ -0.9
CTSA-213ENST00000606782 TMEM250H0YL14 139 aa9.44□□□□□ -0.9
CTSA-213ENST00000606782 INSP01308 110 aa9.44□□□□□ -0.9
CTSA-213ENST00000606782 RNASE4P34096 147 aaKnown RBP9.44□□□□□ -0.9
CTSA-213ENST00000606782 AKR1C3P42330 323 aa9.44□□□□□ -0.9
CTSA-213ENST00000606782 TAS2R60P59551 318 aa9.44□□□□□ -0.9
CTSA-213ENST00000606782 LGALS9BQ3B8N2 356 aa9.44□□□□□ -0.9
CTSA-213ENST00000606782 TOR2AQ5JU69 321 aa9.44□□□□□ -0.9
CTSA-213ENST00000606782 PRR9Q5T870 116 aa9.44□□□□□ -0.9
CTSA-213ENST00000606782 TMEM208Q9BTX3 173 aa9.44□□□□□ -0.9
CTSA-213ENST00000606782 SMDT1Q9H4I9 107 aa9.44□□□□□ -0.9
CTSA-213ENST00000606782 MED9Q9NWA0 146 aa9.44□□□□□ -0.9
CTSA-213ENST00000606782 TRAV12-3A0A0B4J271 114 aa9.43□□□□□ -0.9
CTSA-213ENST00000606782 C7orf71A4D174 169 aa9.43□□□□□ -0.9
CTSA-213ENST00000606782 LYRM9A8MSI8 78 aa9.43□□□□□ -0.9
CTSA-213ENST00000606782 LTAP01374 205 aa9.43□□□□□ -0.9
CTSA-213ENST00000606782 RPL35P42766 123 aaKnown RBP9.43□□□□□ -0.9
CTSA-213ENST00000606782 UBE2G1P62253 170 aa9.43□□□□□ -0.9
CTSA-213ENST00000606782 BTN1A1Q13410 526 aa9.43□□□□□ -0.9
CTSA-213ENST00000606782 RNF212Q495C1 297 aa9.43□□□□□ -0.9
CTSA-213ENST00000606782 Q6AWC8 147 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms