RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 MRAPQ8TCY5 172 aa3.13□□□□□ -1.91
HMGB1P50-201ENST00000605814 TIMD4Q96H15 378 aa3.13□□□□□ -1.91
HMGB1P50-201ENST00000605814 TMEM101Q96IK0 257 aa3.13□□□□□ -1.91
HMGB1P50-201ENST00000605814 SGK494Q96LW2 274 aa3.13□□□□□ -1.91
HMGB1P50-201ENST00000605814 PRR25Q96S07 402 aa3.13□□□□□ -1.91
HMGB1P50-201ENST00000605814 SCNM1Q9BWG6 230 aa3.13□□□□□ -1.91
HMGB1P50-201ENST00000605814 TTTY13Q9BZ97 58 aa3.13□□□□□ -1.91
HMGB1P50-201ENST00000605814 TMEM160Q9NX00 188 aa3.13□□□□□ -1.91
HMGB1P50-201ENST00000605814 C21orf62Q9NYP8 219 aa3.13□□□□□ -1.91
HMGB1P50-201ENST00000605814 CALYQ9NYX4 217 aa3.13□□□□□ -1.91
HMGB1P50-201ENST00000605814 PRO1854Q9UHT4 67 aa3.13□□□□□ -1.91
HMGB1P50-201ENST00000605814 ZNF580Q9UK33 172 aa3.13□□□□□ -1.91
HMGB1P50-201ENST00000605814 ASXL3Q9C0F0 2248 aa3.12□□□□□ -1.91
HMGB1P50-201ENST00000605814 IGHV3-43A0A0B4J1X8 118 aa3.12□□□□□ -1.91
HMGB1P50-201ENST00000605814 TRAV2A0A0B4J234 112 aa3.12□□□□□ -1.91
HMGB1P50-201ENST00000605814 A0A0B4J2C4 111 aa3.12□□□□□ -1.91
HMGB1P50-201ENST00000605814 LOC107984156A0A0G2JMH3 177 aa3.12□□□□□ -1.91
HMGB1P50-201ENST00000605814 A0A0J9YY99 117 aa3.12□□□□□ -1.91
HMGB1P50-201ENST00000605814 TRBV30A0A0K0K1B3 111 aa3.12□□□□□ -1.91
HMGB1P50-201ENST00000605814 SRRM5B3KS81 715 aa3.12□□□□□ -1.91
HMGB1P50-201ENST00000605814 C9JAW5 83 aa3.12□□□□□ -1.91
HMGB1P50-201ENST00000605814 H3BT86 120 aa3.12□□□□□ -1.91
HMGB1P50-201ENST00000605814 NPFFO15130 113 aa3.12□□□□□ -1.91
HMGB1P50-201ENST00000605814 MRPS12O15235 138 aaKnown RBP3.12□□□□□ -1.91
HMGB1P50-201ENST00000605814 NDUFA7O95182 113 aa3.12□□□□□ -1.91
HMGB1P50-201ENST00000605814 LHBP01229 141 aa3.12□□□□□ -1.91
HMGB1P50-201ENST00000605814 IGHV3-30P01768 117 aa3.12□□□□□ -1.91
HMGB1P50-201ENST00000605814 GRPP07492 148 aa3.12□□□□□ -1.91
HMGB1P50-201ENST00000605814 SAA2P0DJI9 122 aaPredicted RBP3.12□□□□□ -1.91
HMGB1P50-201ENST00000605814 LINC00694P0DN24 101 aa3.12□□□□□ -1.91
HMGB1P50-201ENST00000605814 IGHV3-30-5P0DP03 117 aa3.12□□□□□ -1.91
HMGB1P50-201ENST00000605814 IGHV3-43DP0DP04 118 aa3.12□□□□□ -1.91
HMGB1P50-201ENST00000605814 CRYGAP11844 174 aa3.12□□□□□ -1.91
HMGB1P50-201ENST00000605814 ANXA2RQ3ZCQ2 193 aa3.12□□□□□ -1.91
HMGB1P50-201ENST00000605814 TMEM170BQ5T4T1 132 aa3.12□□□□□ -1.91
HMGB1P50-201ENST00000605814 SIGLEC15Q6ZMC9 328 aa3.12□□□□□ -1.91
HMGB1P50-201ENST00000605814 ZNF833PQ6ZTB9 187 aa3.12□□□□□ -1.91
HMGB1P50-201ENST00000605814 GOLT1AQ6ZVE7 132 aa3.12□□□□□ -1.91
HMGB1P50-201ENST00000605814 Q71RC1 249 aaPredicted RBP3.12□□□□□ -1.91
HMGB1P50-201ENST00000605814 FAM19A5Q7Z5A7 132 aaPredicted RBP3.12□□□□□ -1.91
HMGB1P50-201ENST00000605814 C5orf38Q86SI9 138 aa3.12□□□□□ -1.91
HMGB1P50-201ENST00000605814 DTX2Q86UW9 622 aa3.12□□□□□ -1.91
HMGB1P50-201ENST00000605814 ARL17AQ8IVW1 177 aa3.12□□□□□ -1.91
HMGB1P50-201ENST00000605814 LINC00311Q8N616 119 aa3.12□□□□□ -1.91
HMGB1P50-201ENST00000605814 NEXN-AS1Q8NBZ9 246 aa3.12□□□□□ -1.91
HMGB1P50-201ENST00000605814 SRSF8Q9BRL6 282 aaKnown RBP3.12□□□□□ -1.91
HMGB1P50-201ENST00000605814 PRADC1Q9BSG0 188 aa3.12□□□□□ -1.91
HMGB1P50-201ENST00000605814 RPP25Q9BUL9 199 aaKnown RBP3.12□□□□□ -1.91
HMGB1P50-201ENST00000605814 NGBQ9NPG2 151 aa3.12□□□□□ -1.91
HMGB1P50-201ENST00000605814 DKK4Q9UBT3 224 aa3.12□□□□□ -1.91
HMGB1P50-201ENST00000605814 HIGD1AQ9Y241 93 aa3.12□□□□□ -1.91
HMGB1P50-201ENST00000605814 TIMM8BQ9Y5J9 83 aaPredicted RBP3.12□□□□□ -1.91
HMGB1P50-201ENST00000605814 RAI1Q7Z5J4 1906 aaPredicted RBP3.12□□□□□ -1.91
HMGB1P50-201ENST00000605814 A0A0C4DFX4 3053 aa3.11□□□□□ -1.91
HMGB1P50-201ENST00000605814 IGKV2D-30A0A075B6S6 120 aa3.11□□□□□ -1.91
HMGB1P50-201ENST00000605814 A4D1N5 150 aa3.11□□□□□ -1.91
HMGB1P50-201ENST00000605814 WNT9BO14905 357 aa3.11□□□□□ -1.91
HMGB1P50-201ENST00000605814 SCRG1O75711 98 aa3.11□□□□□ -1.91
HMGB1P50-201ENST00000605814 IGHV3-33P01772 117 aa3.11□□□□□ -1.91
HMGB1P50-201ENST00000605814 CRYGDP07320 174 aa3.11□□□□□ -1.91
HMGB1P50-201ENST00000605814 CECR9P0C854 216 aa3.11□□□□□ -1.91
HMGB1P50-201ENST00000605814 SAA1P0DJI8 122 aaPredicted RBP3.11□□□□□ -1.91
HMGB1P50-201ENST00000605814 COX6A1P12074 109 aa3.11□□□□□ -1.91
HMGB1P50-201ENST00000605814 KRTAP10-6P60371 365 aaPredicted RBP3.11□□□□□ -1.91
HMGB1P50-201ENST00000605814 WT1-ASQ06250 92 aa3.11□□□□□ -1.91
HMGB1P50-201ENST00000605814 ERCC8Q13216 396 aa3.11□□□□□ -1.91
HMGB1P50-201ENST00000605814 SRSF9Q13242 221 aaKnown RBP eCLIP3.11□□□□□ -1.91
HMGB1P50-201ENST00000605814 IL11RAQ14626 422 aa3.11□□□□□ -1.91
HMGB1P50-201ENST00000605814 ATXN8Q156A1 80 aa3.11□□□□□ -1.91
HMGB1P50-201ENST00000605814 LINC01620Q4KN68 170 aa3.11□□□□□ -1.91
HMGB1P50-201ENST00000605814 ORMDL2Q53FV1 153 aa3.11□□□□□ -1.91
HMGB1P50-201ENST00000605814 FAM201AQ5SY85 155 aa3.11□□□□□ -1.91
HMGB1P50-201ENST00000605814 Q6ZQT7 251 aa3.11□□□□□ -1.91
HMGB1P50-201ENST00000605814 IL17RELQ6ZVW7 336 aa3.11□□□□□ -1.91
HMGB1P50-201ENST00000605814 TDHQ8IZJ6 230 aa3.11□□□□□ -1.91
HMGB1P50-201ENST00000605814 NRACQ8N912 160 aa3.11□□□□□ -1.91
HMGB1P50-201ENST00000605814 TOMM6Q96B49 74 aa3.11□□□□□ -1.91
HMGB1P50-201ENST00000605814 FLYWCH2Q96CP2 140 aaKnown RBP3.11□□□□□ -1.91
HMGB1P50-201ENST00000605814 SHANK2-AS3Q9BTD1 123 aa3.11□□□□□ -1.91
HMGB1P50-201ENST00000605814 DCTN5Q9BTE1 182 aa3.11□□□□□ -1.91
HMGB1P50-201ENST00000605814 SPRY4Q9C004 299 aa3.11□□□□□ -1.91
HMGB1P50-201ENST00000605814 FSCN3Q9NQT6 498 aa3.11□□□□□ -1.91
HMGB1P50-201ENST00000605814 MRPL36Q9P0J6 103 aaKnown RBP3.11□□□□□ -1.91
HMGB1P50-201ENST00000605814 RPUSD1Q9UJJ7 312 aaKnown RBP3.11□□□□□ -1.91
HMGB1P50-201ENST00000605814 PI4KAP42356 2102 aa3.11□□□□□ -1.91
HMGB1P50-201ENST00000605814 EP400Q96L91 3159 aa3.1□□□□□ -1.91
HMGB1P50-201ENST00000605814 DSCAMO60469 2012 aa3.1□□□□□ -1.91
HMGB1P50-201ENST00000605814 DOCK10Q96BY6 2186 aa3.1□□□□□ -1.91
HMGB1P50-201ENST00000605814 IGKV1D-17A0A075B6S4 117 aa3.1□□□□□ -1.91
HMGB1P50-201ENST00000605814 TRAV8-1A0A0A6YYK1 113 aa3.1□□□□□ -1.91
HMGB1P50-201ENST00000605814 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.1□□□□□ -1.91
HMGB1P50-201ENST00000605814 IGHV1-69DA0A0B4J2H0 117 aa3.1□□□□□ -1.91
HMGB1P50-201ENST00000605814 A0A0J9YX75 114 aa3.1□□□□□ -1.91
HMGB1P50-201ENST00000605814 F8WDY8 70 aa3.1□□□□□ -1.91
HMGB1P50-201ENST00000605814 H3BRN7 92 aa3.1□□□□□ -1.91
HMGB1P50-201ENST00000605814 SH2D1AO60880 128 aa3.1□□□□□ -1.91
HMGB1P50-201ENST00000605814 PPP1R17O96001 155 aa3.1□□□□□ -1.91
HMGB1P50-201ENST00000605814 RFPL3SP0C7P2 107 aa3.1□□□□□ -1.91
HMGB1P50-201ENST00000605814 COX7CP15954 63 aa3.1□□□□□ -1.91
HMGB1P50-201ENST00000605814 UCNP55089 124 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms