RNA–Protein interactions for RNA: ENST00000602088.7

SSBP4-213, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-213ENST00000602088 TRAV8-1A0A0A6YYK1 113 aa11.81□□□□□ -0.52
SSBP4-213ENST00000602088 SERTM2A0A1B0GWG4 89 aa11.81□□□□□ -0.52
SSBP4-213ENST00000602088 KANTRA0A1W2PQU2 76 aa11.81□□□□□ -0.52
SSBP4-213ENST00000602088 A0A1W2PRE2 83 aa11.81□□□□□ -0.52
SSBP4-213ENST00000602088 GGTLC3B5MD39 225 aa11.81□□□□□ -0.52
SSBP4-213ENST00000602088 ATP5G1P05496 136 aa11.81□□□□□ -0.52
SSBP4-213ENST00000602088 SEC11BP0C7V7 166 aa11.81□□□□□ -0.52
SSBP4-213ENST00000602088 ATP5G3P48201 142 aa11.81□□□□□ -0.52
SSBP4-213ENST00000602088 DAZ2Q13117 558 aaKnown RBP11.81□□□□□ -0.52
SSBP4-213ENST00000602088 Q6AWC8 147 aa11.81□□□□□ -0.52
SSBP4-213ENST00000602088 LINC00612Q8N6U2 182 aa11.81□□□□□ -0.52
SSBP4-213ENST00000602088 C11orf72Q8NBR9 251 aa11.81□□□□□ -0.52
SSBP4-213ENST00000602088 ZNF680Q8NEM1 530 aa11.81□□□□□ -0.52
SSBP4-213ENST00000602088 ZNF471Q9BX82 626 aaPredicted RBP11.81□□□□□ -0.52
SSBP4-213ENST00000602088 TMPRSS5Q9H3S3 457 aa11.81□□□□□ -0.52
SSBP4-213ENST00000602088 RGS13O14921 159 aa11.8□□□□□ -0.52
SSBP4-213ENST00000602088 TCRAP04437 139 aa11.8□□□□□ -0.52
SSBP4-213ENST00000602088 TMUB2Q71RG4 321 aa11.8□□□□□ -0.52
SSBP4-213ENST00000602088 TCTE3Q8IZS6 198 aa11.8□□□□□ -0.52
SSBP4-213ENST00000602088 TVP23CQ96ET8 276 aa11.8□□□□□ -0.52
SSBP4-213ENST00000602088 GSN-AS1Q9NRJ2 163 aa11.8□□□□□ -0.52
SSBP4-213ENST00000602088 EPDR1Q9UM22 224 aa11.8□□□□□ -0.52
SSBP4-213ENST00000602088 MAP1LC3B2A6NCE7 125 aa11.79□□□□□ -0.52
SSBP4-213ENST00000602088 FGF8P55075 233 aaPredicted RBP11.79□□□□□ -0.52
SSBP4-213ENST00000602088 TMEM88Q6PEY1 159 aa11.79□□□□□ -0.52
SSBP4-213ENST00000602088 MAP1LC3BQ9GZQ8 125 aa11.79□□□□□ -0.52
SSBP4-213ENST00000602088 TP53TG3Q9ULZ0 132 aa11.79□□□□□ -0.52
SSBP4-213ENST00000602088 GAGE12BA1L429 117 aa11.78□□□□□ -0.52
SSBP4-213ENST00000602088 K7EQM0 130 aa11.78□□□□□ -0.52
SSBP4-213ENST00000602088 PFDN1O60925 122 aa11.78□□□□□ -0.52
SSBP4-213ENST00000602088 GAGE7O76087 117 aa11.78□□□□□ -0.52
SSBP4-213ENST00000602088 GAGE12FP0CL80 117 aa11.78□□□□□ -0.52
SSBP4-213ENST00000602088 GAGE12GP0CL81 117 aa11.78□□□□□ -0.52
SSBP4-213ENST00000602088 GAGE12IP0CL82 117 aa11.78□□□□□ -0.52
SSBP4-213ENST00000602088 FHITP49789 147 aa11.78□□□□□ -0.52
SSBP4-213ENST00000602088 TCL1AP56279 114 aa11.78□□□□□ -0.52
SSBP4-213ENST00000602088 EIF5AP63241 154 aaKnown RBP11.78□□□□□ -0.52
SSBP4-213ENST00000602088 IBA57Q5T440 356 aaKnown RBP11.78□□□□□ -0.52
SSBP4-213ENST00000602088 SGK494Q96LW2 274 aa11.78□□□□□ -0.52
SSBP4-213ENST00000602088 KLF12Q9Y4X4 402 aa11.78□□□□□ -0.52
SSBP4-213ENST00000602088 UMAD1C9J7I0 102 aa11.77□□□□□ -0.53
SSBP4-213ENST00000602088 F5H768 121 aa11.77□□□□□ -0.53
SSBP4-213ENST00000602088 IGLV2-11P01706 119 aa11.77□□□□□ -0.53
SSBP4-213ENST00000602088 UBE2G2P60604 165 aa11.77□□□□□ -0.53
SSBP4-213ENST00000602088 LGALSLQ3ZCW2 172 aaPredicted RBP11.77□□□□□ -0.53
SSBP4-213ENST00000602088 MUC21Q5SSG8 566 aa11.77□□□□□ -0.53
SSBP4-213ENST00000602088 Q6ZTI0 123 aa11.77□□□□□ -0.53
SSBP4-213ENST00000602088 CYB561D1Q8N8Q1 229 aa11.77□□□□□ -0.53
SSBP4-213ENST00000602088 ATG101Q9BSB4 218 aa11.77□□□□□ -0.53
SSBP4-213ENST00000602088 NKX6-2Q9C056 277 aaPredicted RBP11.77□□□□□ -0.53
SSBP4-213ENST00000602088 TREM1Q9NP99 234 aa11.77□□□□□ -0.53
SSBP4-213ENST00000602088 PSG8Q9UQ74 426 aa11.77□□□□□ -0.53
SSBP4-213ENST00000602088 FAM74A7A6NL05 159 aa11.76□□□□□ -0.53
SSBP4-213ENST00000602088 P0DMU3 169 aa11.76□□□□□ -0.53
SSBP4-213ENST00000602088 FAM231AP0DMU4 169 aa11.76□□□□□ -0.53
SSBP4-213ENST00000602088 FAM231CP0DMU5 169 aa11.76□□□□□ -0.53
SSBP4-213ENST00000602088 FLI1Q01543 452 aaPredicted RBP11.76□□□□□ -0.53
SSBP4-213ENST00000602088 FAM159AQ6UWV7 190 aa11.76□□□□□ -0.53
SSBP4-213ENST00000602088 STOML3Q8TAV4 291 aa11.76□□□□□ -0.53
SSBP4-213ENST00000602088 KMT2AQ03164 3969 aa11.76□□□□□ -0.53
SSBP4-213ENST00000602088 FBLL1A6NHQ2 334 aaKnown RBP11.75□□□□□ -0.53
SSBP4-213ENST00000602088 F6UZH7 168 aa11.75□□□□□ -0.53
SSBP4-213ENST00000602088 SPINK4O60575 86 aa11.75□□□□□ -0.53
SSBP4-213ENST00000602088 IFNA7P01567 189 aa11.75□□□□□ -0.53
SSBP4-213ENST00000602088 C1QBP02746 253 aa11.75□□□□□ -0.53
SSBP4-213ENST00000602088 TPT1P13693 172 aaKnown RBP11.75□□□□□ -0.53
SSBP4-213ENST00000602088 TDRG1Q3Y452 100 aa11.75□□□□□ -0.53
SSBP4-213ENST00000602088 C15orf53Q8NAA6 179 aa11.75□□□□□ -0.53
SSBP4-213ENST00000602088 FAM213BQ8TBF2 198 aa11.75□□□□□ -0.53
SSBP4-213ENST00000602088 MBD3L1Q8WWY6 194 aa11.75□□□□□ -0.53
SSBP4-213ENST00000602088 NDFIP1Q9BT67 221 aa11.75□□□□□ -0.53
SSBP4-213ENST00000602088 TRAV21A0A0B4J279 112 aa11.74□□□□□ -0.53
SSBP4-213ENST00000602088 ZNF415Q09FC8 603 aa11.74□□□□□ -0.53
SSBP4-213ENST00000602088 DPPA3Q6W0C5 159 aa11.74□□□□□ -0.53
SSBP4-213ENST00000602088 TMEM75Q8N9X5 138 aa11.74□□□□□ -0.53
SSBP4-213ENST00000602088 SFT2D1Q8WV19 159 aa11.74□□□□□ -0.53
SSBP4-213ENST00000602088 LINC00479Q96M42 142 aa11.74□□□□□ -0.53
SSBP4-213ENST00000602088 C18orf15Q96N68 181 aa11.74□□□□□ -0.53
SSBP4-213ENST00000602088 hCG_2014768A0A024R1R8 64 aa11.73□□□□□ -0.53
SSBP4-213ENST00000602088 TRGV1A0A0A0MS02 117 aa11.73□□□□□ -0.53
SSBP4-213ENST00000602088 TMEM183BQ1AE95 376 aa11.73□□□□□ -0.53
SSBP4-213ENST00000602088 LGALS9BQ3B8N2 356 aa11.73□□□□□ -0.53
SSBP4-213ENST00000602088 PRNTQ86SH4 94 aa11.73□□□□□ -0.53
SSBP4-213ENST00000602088 TMEM183AQ8IXX5 376 aa11.73□□□□□ -0.53
SSBP4-213ENST00000602088 POM121L12Q8N7R1 296 aa11.73□□□□□ -0.53
SSBP4-213ENST00000602088 C8orf49Q96NF6 230 aa11.73□□□□□ -0.53
SSBP4-213ENST00000602088 MDFICQ9P1T7 246 aa11.73□□□□□ -0.53
SSBP4-213ENST00000602088 TRGV11A0A075B6L2 103 aa11.72□□□□□ -0.53
SSBP4-213ENST00000602088 TRGV2A0A075B6R0 118 aa11.72□□□□□ -0.53
SSBP4-213ENST00000602088 TRAV34A0A0B4J273 112 aa11.72□□□□□ -0.53
SSBP4-213ENST00000602088 PEX7O00628 323 aa11.72□□□□□ -0.53
SSBP4-213ENST00000602088 HOXA5P20719 270 aa11.72□□□□□ -0.53
SSBP4-213ENST00000602088 ZNF80P51504 273 aaPredicted RBP11.72□□□□□ -0.53
SSBP4-213ENST00000602088 OR5I1Q13606 314 aa11.72□□□□□ -0.53
SSBP4-213ENST00000602088 SAPCD1Q5SSQ6 148 aa11.72□□□□□ -0.53
SSBP4-213ENST00000602088 AKAP14Q86UN6 197 aa11.72□□□□□ -0.53
SSBP4-213ENST00000602088 HIST1H2BAQ96A08 127 aa11.72□□□□□ -0.53
SSBP4-213ENST00000602088 NAGKQ9UJ70 344 aa11.72□□□□□ -0.53
SSBP4-213ENST00000602088 ARL2-SNX15V9GYD0 113 aa11.72□□□□□ -0.53
SSBP4-213ENST00000602088 GNRH2O43555 120 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 631.9 ms