RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 GAGE7O76087 117 aa7.16□□□□□ -1.26
BRCA1-227ENST00000591849 ATP5G1P05496 136 aa7.16□□□□□ -1.26
BRCA1-227ENST00000591849 GAGE12FP0CL80 117 aa7.16□□□□□ -1.26
BRCA1-227ENST00000591849 GAGE12GP0CL81 117 aa7.16□□□□□ -1.26
BRCA1-227ENST00000591849 GAGE12IP0CL82 117 aa7.16□□□□□ -1.26
BRCA1-227ENST00000591849 ATP5G3P48201 142 aa7.16□□□□□ -1.26
BRCA1-227ENST00000591849 FGF8P55075 233 aaPredicted RBP7.16□□□□□ -1.26
BRCA1-227ENST00000591849 UBE2G2P60604 165 aa7.16□□□□□ -1.26
BRCA1-227ENST00000591849 ZFAND2AQ8N6M9 145 aa7.16□□□□□ -1.26
BRCA1-227ENST00000591849 RNASE8Q8TDE3 154 aaKnown RBP7.16□□□□□ -1.26
BRCA1-227ENST00000591849 TREM1Q9NP99 234 aa7.16□□□□□ -1.26
BRCA1-227ENST00000591849 GSN-AS1Q9NRJ2 163 aa7.16□□□□□ -1.26
BRCA1-227ENST00000591849 TRGV2A0A075B6R0 118 aa7.15□□□□□ -1.26
BRCA1-227ENST00000591849 A0A1W2PRE2 83 aa7.15□□□□□ -1.26
BRCA1-227ENST00000591849 MAP1LC3B2A6NCE7 125 aa7.15□□□□□ -1.26
BRCA1-227ENST00000591849 UMAD1C9J7I0 102 aa7.15□□□□□ -1.26
BRCA1-227ENST00000591849 ZNF324O75467 553 aaPredicted RBP7.15□□□□□ -1.26
BRCA1-227ENST00000591849 TCRAP04437 139 aa7.15□□□□□ -1.26
BRCA1-227ENST00000591849 SEC11BP0C7V7 166 aa7.15□□□□□ -1.26
BRCA1-227ENST00000591849 TPT1P13693 172 aaKnown RBP7.15□□□□□ -1.26
BRCA1-227ENST00000591849 PPT1P50897 306 aa7.15□□□□□ -1.26
BRCA1-227ENST00000591849 OR5I1Q13606 314 aa7.15□□□□□ -1.26
BRCA1-227ENST00000591849 ANXA2RQ3ZCQ2 193 aa7.15□□□□□ -1.26
BRCA1-227ENST00000591849 MUC21Q5SSG8 566 aa7.15□□□□□ -1.26
BRCA1-227ENST00000591849 FAM159AQ6UWV7 190 aa7.15□□□□□ -1.26
BRCA1-227ENST00000591849 SSX7Q7RTT5 188 aa7.15□□□□□ -1.26
BRCA1-227ENST00000591849 UBE2DNLQ8IWF7 75 aa7.15□□□□□ -1.26
BRCA1-227ENST00000591849 FAM213BQ8TBF2 198 aa7.15□□□□□ -1.26
BRCA1-227ENST00000591849 TMED6Q8WW62 240 aa7.15□□□□□ -1.26
BRCA1-227ENST00000591849 SGK494Q96LW2 274 aa7.15□□□□□ -1.26
BRCA1-227ENST00000591849 LINC00467Q9BRT7 94 aa7.15□□□□□ -1.26
BRCA1-227ENST00000591849 MAP1LC3BQ9GZQ8 125 aa7.15□□□□□ -1.26
BRCA1-227ENST00000591849 TMPRSS5Q9H3S3 457 aa7.15□□□□□ -1.26
BRCA1-227ENST00000591849 NAGKQ9UJ70 344 aa7.15□□□□□ -1.26
BRCA1-227ENST00000591849 EPDR1Q9UM22 224 aa7.15□□□□□ -1.26
BRCA1-227ENST00000591849 HYDINQ4G0P3 5121 aa7.15□□□□□ -1.27
BRCA1-227ENST00000591849 TRGV1A0A0A0MS02 117 aa7.14□□□□□ -1.27
BRCA1-227ENST00000591849 TRAV8-1A0A0A6YYK1 113 aa7.14□□□□□ -1.27
BRCA1-227ENST00000591849 TRAV21A0A0B4J279 112 aa7.14□□□□□ -1.27
BRCA1-227ENST00000591849 PLAC8L1A1L4L8 177 aa7.14□□□□□ -1.27
BRCA1-227ENST00000591849 F6UZH7 168 aa7.14□□□□□ -1.27
BRCA1-227ENST00000591849 P0DMU3 169 aa7.14□□□□□ -1.27
BRCA1-227ENST00000591849 FAM231AP0DMU4 169 aa7.14□□□□□ -1.27
BRCA1-227ENST00000591849 FAM231CP0DMU5 169 aa7.14□□□□□ -1.27
BRCA1-227ENST00000591849 DAZ2Q13117 558 aaKnown RBP7.14□□□□□ -1.27
BRCA1-227ENST00000591849 ZNF726P1Q15940 193 aa7.14□□□□□ -1.27
BRCA1-227ENST00000591849 ZFP69Q49AA0 526 aa7.14□□□□□ -1.27
BRCA1-227ENST00000591849 PRR9Q5T870 116 aa7.14□□□□□ -1.27
BRCA1-227ENST00000591849 CST9LP1Q5W188 147 aa7.14□□□□□ -1.27
BRCA1-227ENST00000591849 EIF5AL1Q6IS14 154 aaKnown RBP7.14□□□□□ -1.27
BRCA1-227ENST00000591849 TMEM88Q6PEY1 159 aa7.14□□□□□ -1.27
BRCA1-227ENST00000591849 PRNTQ86SH4 94 aa7.14□□□□□ -1.27
BRCA1-227ENST00000591849 AKAP14Q86UN6 197 aa7.14□□□□□ -1.27
BRCA1-227ENST00000591849 SUN5Q8TC36 379 aa7.14□□□□□ -1.27
BRCA1-227ENST00000591849 SFT2D1Q8WV19 159 aa7.14□□□□□ -1.27
BRCA1-227ENST00000591849 NKX6-2Q9C056 277 aaPredicted RBP7.14□□□□□ -1.27
BRCA1-227ENST00000591849 TRGV11A0A075B6L2 103 aa7.13□□□□□ -1.27
BRCA1-227ENST00000591849 A0A1B0GV50 99 aa7.13□□□□□ -1.27
BRCA1-227ENST00000591849 FBLL1A6NHQ2 334 aaKnown RBP7.13□□□□□ -1.27
BRCA1-227ENST00000591849 NUDT3O95989 172 aa7.13□□□□□ -1.27
BRCA1-227ENST00000591849 FLI1Q01543 452 aaPredicted RBP7.13□□□□□ -1.27
BRCA1-227ENST00000591849 ZNF415Q09FC8 603 aa7.13□□□□□ -1.27
BRCA1-227ENST00000591849 TCTE3Q8IZS6 198 aa7.13□□□□□ -1.27
BRCA1-227ENST00000591849 CYB561D1Q8N8Q1 229 aa7.13□□□□□ -1.27
BRCA1-227ENST00000591849 ATG101Q9BSB4 218 aa7.13□□□□□ -1.27
BRCA1-227ENST00000591849 TP53TG3Q9ULZ0 132 aa7.13□□□□□ -1.27
BRCA1-227ENST00000591849 PSG8Q9UQ74 426 aa7.13□□□□□ -1.27
BRCA1-227ENST00000591849 KLF12Q9Y4X4 402 aa7.13□□□□□ -1.27
BRCA1-227ENST00000591849 GGTLC3B5MD39 225 aa7.12□□□□□ -1.27
BRCA1-227ENST00000591849 H2AFB1P0C5Y9 115 aa7.12□□□□□ -1.27
BRCA1-227ENST00000591849 FHITP49789 147 aa7.12□□□□□ -1.27
BRCA1-227ENST00000591849 TMEM183BQ1AE95 376 aa7.12□□□□□ -1.27
BRCA1-227ENST00000591849 SAPCD1Q5SSQ6 148 aa7.12□□□□□ -1.27
BRCA1-227ENST00000591849 IBA57Q5T440 356 aaKnown RBP7.12□□□□□ -1.27
BRCA1-227ENST00000591849 Q6AWC8 147 aa7.12□□□□□ -1.27
BRCA1-227ENST00000591849 Q6ZQT7 251 aa7.12□□□□□ -1.27
BRCA1-227ENST00000591849 Q6ZTI0 123 aa7.12□□□□□ -1.27
BRCA1-227ENST00000591849 TMEM183AQ8IXX5 376 aa7.12□□□□□ -1.27
BRCA1-227ENST00000591849 C15orf53Q8NAA6 179 aa7.12□□□□□ -1.27
BRCA1-227ENST00000591849 SDF2L1Q9HCN8 221 aa7.12□□□□□ -1.27
BRCA1-227ENST00000591849 TRAV34A0A0B4J273 112 aa7.11□□□□□ -1.27
BRCA1-227ENST00000591849 FAM74A7A6NL05 159 aa7.11□□□□□ -1.27
BRCA1-227ENST00000591849 TEX46H3BTG2 121 aa7.11□□□□□ -1.27
BRCA1-227ENST00000591849 PEX7O00628 323 aa7.11□□□□□ -1.27
BRCA1-227ENST00000591849 C1QBP02746 253 aa7.11□□□□□ -1.27
BRCA1-227ENST00000591849 TCL1AP56279 114 aa7.11□□□□□ -1.27
BRCA1-227ENST00000591849 SMUG1Q53HV7 270 aa7.11□□□□□ -1.27
BRCA1-227ENST00000591849 DPPA3Q6W0C5 159 aa7.11□□□□□ -1.27
BRCA1-227ENST00000591849 TMEM75Q8N9X5 138 aa7.11□□□□□ -1.27
BRCA1-227ENST00000591849 HIST1H2BAQ96A08 127 aa7.11□□□□□ -1.27
BRCA1-227ENST00000591849 KCNS1Q96KK3 526 aa7.11□□□□□ -1.27
BRCA1-227ENST00000591849 A0A0J9YY99 117 aa7.1□□□□□ -1.27
BRCA1-227ENST00000591849 PAGE4O60829 102 aa7.1□□□□□ -1.27
BRCA1-227ENST00000591849 GCGP01275 180 aa7.1□□□□□ -1.27
BRCA1-227ENST00000591849 UBE2G1P62253 170 aa7.1□□□□□ -1.27
BRCA1-227ENST00000591849 LGALSLQ3ZCW2 172 aaPredicted RBP7.1□□□□□ -1.27
BRCA1-227ENST00000591849 POM121L12Q8N7R1 296 aa7.1□□□□□ -1.27
BRCA1-227ENST00000591849 C11orf72Q8NBR9 251 aa7.1□□□□□ -1.27
BRCA1-227ENST00000591849 MBD3L1Q8WWY6 194 aa7.1□□□□□ -1.27
BRCA1-227ENST00000591849 TVP23CQ96ET8 276 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms