RNA–Protein interactions for RNA: ENST00000587256.1

ATG4D-207, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-207ENST00000587256 GAGE12FP0CL80 117 aa10.47□□□□□ -0.73
ATG4D-207ENST00000587256 GAGE12GP0CL81 117 aa10.47□□□□□ -0.73
ATG4D-207ENST00000587256 GAGE12IP0CL82 117 aa10.47□□□□□ -0.73
ATG4D-207ENST00000587256 P0DMU3 169 aa10.47□□□□□ -0.73
ATG4D-207ENST00000587256 FAM231AP0DMU4 169 aa10.47□□□□□ -0.73
ATG4D-207ENST00000587256 FAM231CP0DMU5 169 aa10.47□□□□□ -0.73
ATG4D-207ENST00000587256 ZNF726P1Q15940 193 aa10.47□□□□□ -0.73
ATG4D-207ENST00000587256 ANXA2RQ3ZCQ2 193 aa10.47□□□□□ -0.73
ATG4D-207ENST00000587256 ARL6IP6Q8N6S5 226 aa10.47□□□□□ -0.73
ATG4D-207ENST00000587256 OR11H4Q8NGC9 324 aa10.47□□□□□ -0.73
ATG4D-207ENST00000587256 GSN-AS1Q9NRJ2 163 aa10.47□□□□□ -0.73
ATG4D-207ENST00000587256 A0A0D9SG52 128 aa10.46□□□□□ -0.73
ATG4D-207ENST00000587256 SERTM2A0A1B0GWG4 89 aa10.46□□□□□ -0.73
ATG4D-207ENST00000587256 GGTLC3B5MD39 225 aa10.46□□□□□ -0.73
ATG4D-207ENST00000587256 K7EQM0 130 aa10.46□□□□□ -0.73
ATG4D-207ENST00000587256 BCL2L11O43521 198 aa10.46□□□□□ -0.73
ATG4D-207ENST00000587256 MUC21Q5SSG8 566 aa10.46□□□□□ -0.73
ATG4D-207ENST00000587256 Q6ZQT7 251 aa10.46□□□□□ -0.73
ATG4D-207ENST00000587256 UBE2DNLQ8IWF7 75 aa10.46□□□□□ -0.73
ATG4D-207ENST00000587256 C11orf72Q8NBR9 251 aa10.46□□□□□ -0.73
ATG4D-207ENST00000587256 SUN5Q8TC36 379 aa10.46□□□□□ -0.73
ATG4D-207ENST00000587256 NDFIP1Q9BT67 221 aa10.46□□□□□ -0.73
ATG4D-207ENST00000587256 ZNF471Q9BX82 626 aaPredicted RBP10.46□□□□□ -0.73
ATG4D-207ENST00000587256 MAP1LC3B2A6NCE7 125 aa10.45□□□□□ -0.74
ATG4D-207ENST00000587256 F6UZH7 168 aa10.45□□□□□ -0.74
ATG4D-207ENST00000587256 PFDN1O60925 122 aa10.45□□□□□ -0.74
ATG4D-207ENST00000587256 TCRAP04437 139 aa10.45□□□□□ -0.74
ATG4D-207ENST00000587256 FGF8P55075 233 aaPredicted RBP10.45□□□□□ -0.74
ATG4D-207ENST00000587256 SUMO1P63165 101 aaKnown RBP10.45□□□□□ -0.74
ATG4D-207ENST00000587256 DAZ2Q13117 558 aaKnown RBP10.45□□□□□ -0.74
ATG4D-207ENST00000587256 IBA57Q5T440 356 aaKnown RBP10.45□□□□□ -0.74
ATG4D-207ENST00000587256 Q6ZTI0 123 aa10.45□□□□□ -0.74
ATG4D-207ENST00000587256 LINC00612Q8N6U2 182 aa10.45□□□□□ -0.74
ATG4D-207ENST00000587256 C15orf53Q8NAA6 179 aa10.45□□□□□ -0.74
ATG4D-207ENST00000587256 SGK494Q96LW2 274 aa10.45□□□□□ -0.74
ATG4D-207ENST00000587256 MAP1LC3BQ9GZQ8 125 aa10.45□□□□□ -0.74
ATG4D-207ENST00000587256 NAGKQ9UJ70 344 aa10.45□□□□□ -0.74
ATG4D-207ENST00000587256 TRGV1A0A0A0MS02 117 aa10.44□□□□□ -0.74
ATG4D-207ENST00000587256 A0A1W2PRE2 83 aa10.44□□□□□ -0.74
ATG4D-207ENST00000587256 TCL1AP56279 114 aa10.44□□□□□ -0.74
ATG4D-207ENST00000587256 UBE2G2P60604 165 aa10.44□□□□□ -0.74
ATG4D-207ENST00000587256 ZNF415Q09FC8 603 aa10.44□□□□□ -0.74
ATG4D-207ENST00000587256 Q6AWC8 147 aa10.44□□□□□ -0.74
ATG4D-207ENST00000587256 CYB561D1Q8N8Q1 229 aa10.44□□□□□ -0.74
ATG4D-207ENST00000587256 TMPRSS5Q9H3S3 457 aa10.44□□□□□ -0.74
ATG4D-207ENST00000587256 TREM1Q9NP99 234 aa10.44□□□□□ -0.74
ATG4D-207ENST00000587256 TP53TG3Q9ULZ0 132 aa10.44□□□□□ -0.74
ATG4D-207ENST00000587256 DNAH6Q9C0G6 4158 aa10.44□□□□□ -0.74
ATG4D-207ENST00000587256 TRGV2A0A075B6R0 118 aa10.43□□□□□ -0.74
ATG4D-207ENST00000587256 OR5I1Q13606 314 aa10.43□□□□□ -0.74
ATG4D-207ENST00000587256 FAM159AQ6UWV7 190 aa10.43□□□□□ -0.74
ATG4D-207ENST00000587256 POM121L12Q8N7R1 296 aa10.43□□□□□ -0.74
ATG4D-207ENST00000587256 EPDR1Q9UM22 224 aa10.43□□□□□ -0.74
ATG4D-207ENST00000587256 KLF12Q9Y4X4 402 aa10.43□□□□□ -0.74
ATG4D-207ENST00000587256 KMT2AQ03164 3969 aa10.43□□□□□ -0.74
ATG4D-207ENST00000587256 TRGV11A0A075B6L2 103 aa10.42□□□□□ -0.74
ATG4D-207ENST00000587256 TRAV21A0A0B4J279 112 aa10.42□□□□□ -0.74
ATG4D-207ENST00000587256 NUDT3O95989 172 aa10.42□□□□□ -0.74
ATG4D-207ENST00000587256 IFNA7P01567 189 aa10.42□□□□□ -0.74
ATG4D-207ENST00000587256 EIF5AP63241 154 aaKnown RBP10.42□□□□□ -0.74
ATG4D-207ENST00000587256 TMEM183BQ1AE95 376 aa10.42□□□□□ -0.74
ATG4D-207ENST00000587256 ZFP69Q49AA0 526 aa10.42□□□□□ -0.74
ATG4D-207ENST00000587256 TMEM183AQ8IXX5 376 aa10.42□□□□□ -0.74
ATG4D-207ENST00000587256 STOML3Q8TAV4 291 aa10.42□□□□□ -0.74
ATG4D-207ENST00000587256 ATG101Q9BSB4 218 aa10.42□□□□□ -0.74
ATG4D-207ENST00000587256 EPPK1P58107 5090 aaKnown RBP10.42□□□□□ -0.74
ATG4D-207ENST00000587256 SEC11BP0C7V7 166 aa10.41□□□□□ -0.74
ATG4D-207ENST00000587256 FHITP49789 147 aa10.41□□□□□ -0.74
ATG4D-207ENST00000587256 FLI1Q01543 452 aaPredicted RBP10.41□□□□□ -0.74
ATG4D-207ENST00000587256 TMUB2Q71RG4 321 aa10.41□□□□□ -0.74
ATG4D-207ENST00000587256 PRNTQ86SH4 94 aa10.41□□□□□ -0.74
ATG4D-207ENST00000587256 TMEM75Q8N9X5 138 aa10.41□□□□□ -0.74
ATG4D-207ENST00000587256 FAM213BQ8TBF2 198 aa10.41□□□□□ -0.74
ATG4D-207ENST00000587256 TVP23CQ96ET8 276 aa10.41□□□□□ -0.74
ATG4D-207ENST00000587256 MRPL16Q9NX20 251 aaKnown RBP10.41□□□□□ -0.74
ATG4D-207ENST00000587256 PSG8Q9UQ74 426 aa10.41□□□□□ -0.74
ATG4D-207ENST00000587256 TRAV26-1A0A087WT03 109 aa10.4□□□□□ -0.74
ATG4D-207ENST00000587256 FBLL1A6NHQ2 334 aaKnown RBP10.4□□□□□ -0.74
ATG4D-207ENST00000587256 UMAD1C9J7I0 102 aa10.4□□□□□ -0.74
ATG4D-207ENST00000587256 SPINK4O60575 86 aa10.4□□□□□ -0.74
ATG4D-207ENST00000587256 TPT1P13693 172 aaKnown RBP10.4□□□□□ -0.74
ATG4D-207ENST00000587256 PPT1P50897 306 aa10.4□□□□□ -0.74
ATG4D-207ENST00000587256 Q6ZNX1 250 aa10.4□□□□□ -0.74
ATG4D-207ENST00000587256 TCTE3Q8IZS6 198 aa10.4□□□□□ -0.74
ATG4D-207ENST00000587256 NKX6-2Q9C056 277 aaPredicted RBP10.4□□□□□ -0.74
ATG4D-207ENST00000587256 hCG_2014768A0A024R1R8 64 aa10.39□□□□□ -0.75
ATG4D-207ENST00000587256 A0A0J9YY99 117 aa10.39□□□□□ -0.75
ATG4D-207ENST00000587256 FAM74A7A6NL05 159 aa10.39□□□□□ -0.75
ATG4D-207ENST00000587256 PEX7O00628 323 aa10.39□□□□□ -0.75
ATG4D-207ENST00000587256 HOXA5P20719 270 aa10.39□□□□□ -0.75
ATG4D-207ENST00000587256 C8orf49Q96NF6 230 aa10.39□□□□□ -0.75
ATG4D-207ENST00000587256 SDF2L1Q9HCN8 221 aa10.39□□□□□ -0.75
ATG4D-207ENST00000587256 MDFICQ9P1T7 246 aa10.39□□□□□ -0.75
ATG4D-207ENST00000587256 A0A1B0GV50 99 aa10.38□□□□□ -0.75
ATG4D-207ENST00000587256 GCGP01275 180 aa10.38□□□□□ -0.75
ATG4D-207ENST00000587256 IGLV2-11P01706 119 aa10.38□□□□□ -0.75
ATG4D-207ENST00000587256 LGALS9BQ3B8N2 356 aa10.38□□□□□ -0.75
ATG4D-207ENST00000587256 TDRG1Q3Y452 100 aa10.38□□□□□ -0.75
ATG4D-207ENST00000587256 RNF212Q495C1 297 aa10.38□□□□□ -0.75
ATG4D-207ENST00000587256 SMUG1Q53HV7 270 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms