RNA–Protein interactions for RNA: ENST00000578789.1

MKS1-207, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-207ENST00000578789 Q6AWC8 147 aa10.23□□□□□ -0.77
MKS1-207ENST00000578789 EIF4E3Q8N5X7 224 aaKnown RBP10.23□□□□□ -0.77
MKS1-207ENST00000578789 C11orf72Q8NBR9 251 aa10.23□□□□□ -0.77
MKS1-207ENST00000578789 ZNF680Q8NEM1 530 aa10.23□□□□□ -0.77
MKS1-207ENST00000578789 ZNF471Q9BX82 626 aaPredicted RBP10.23□□□□□ -0.77
MKS1-207ENST00000578789 NOP10Q9NPE3 64 aaKnown RBP10.23□□□□□ -0.77
MKS1-207ENST00000578789 VPS13DQ5THJ4 4388 aa10.22□□□□□ -0.77
MKS1-207ENST00000578789 MAP1LC3B2A6NCE7 125 aa10.22□□□□□ -0.77
MKS1-207ENST00000578789 SNURFLB1AK76 121 aa10.22□□□□□ -0.77
MKS1-207ENST00000578789 DEFB130BP0DP73 79 aa10.22□□□□□ -0.77
MKS1-207ENST00000578789 DEFB130AP0DP74 79 aa10.22□□□□□ -0.77
MKS1-207ENST00000578789 DAZ2Q13117 558 aaKnown RBP10.22□□□□□ -0.77
MKS1-207ENST00000578789 Q6ZQT7 251 aa10.22□□□□□ -0.77
MKS1-207ENST00000578789 TMUB2Q71RG4 321 aa10.22□□□□□ -0.77
MKS1-207ENST00000578789 NDUFAF3Q9BU61 184 aa10.22□□□□□ -0.77
MKS1-207ENST00000578789 MAP1LC3BQ9GZQ8 125 aa10.22□□□□□ -0.77
MKS1-207ENST00000578789 IGHV1OR15-1A0A075B7D0 117 aa10.21□□□□□ -0.77
MKS1-207ENST00000578789 TRAV8-1A0A0A6YYK1 113 aa10.21□□□□□ -0.77
MKS1-207ENST00000578789 CBY3A6NI87 242 aa10.21□□□□□ -0.77
MKS1-207ENST00000578789 UMAD1C9J7I0 102 aa10.21□□□□□ -0.77
MKS1-207ENST00000578789 RGS13O14921 159 aa10.21□□□□□ -0.77
MKS1-207ENST00000578789 HTN3P15516 51 aa10.21□□□□□ -0.77
MKS1-207ENST00000578789 FGF8P55075 233 aaPredicted RBP10.21□□□□□ -0.77
MKS1-207ENST00000578789 SUMO1P63165 101 aaKnown RBP10.21□□□□□ -0.77
MKS1-207ENST00000578789 EIF5AP63241 154 aaKnown RBP10.21□□□□□ -0.77
MKS1-207ENST00000578789 IBA57Q5T440 356 aaKnown RBP10.21□□□□□ -0.77
MKS1-207ENST00000578789 IQCF2Q8IXL9 164 aa10.21□□□□□ -0.77
MKS1-207ENST00000578789 STOML3Q8TAV4 291 aa10.21□□□□□ -0.77
MKS1-207ENST00000578789 TMPRSS5Q9H3S3 457 aa10.21□□□□□ -0.77
MKS1-207ENST00000578789 K7EQM0 130 aa10.2□□□□□ -0.78
MKS1-207ENST00000578789 PFDN1O60925 122 aa10.2□□□□□ -0.78
MKS1-207ENST00000578789 ATP5G1P05496 136 aa10.2□□□□□ -0.78
MKS1-207ENST00000578789 ATP5G3P48201 142 aa10.2□□□□□ -0.78
MKS1-207ENST00000578789 TCL1AP56279 114 aa10.2□□□□□ -0.78
MKS1-207ENST00000578789 CYB561D1Q8N8Q1 229 aa10.2□□□□□ -0.78
MKS1-207ENST00000578789 TVP23CQ96ET8 276 aa10.2□□□□□ -0.78
MKS1-207ENST00000578789 ATG101Q9BSB4 218 aa10.2□□□□□ -0.78
MKS1-207ENST00000578789 EPDR1Q9UM22 224 aa10.2□□□□□ -0.78
MKS1-207ENST00000578789 FAM74A7A6NL05 159 aa10.19□□□□□ -0.78
MKS1-207ENST00000578789 IGLV2-11P01706 119 aa10.19□□□□□ -0.78
MKS1-207ENST00000578789 C1QBP02746 253 aa10.19□□□□□ -0.78
MKS1-207ENST00000578789 TPT1P13693 172 aaKnown RBP10.19□□□□□ -0.78
MKS1-207ENST00000578789 FHITP49789 147 aa10.19□□□□□ -0.78
MKS1-207ENST00000578789 TMEM75Q8N9X5 138 aa10.19□□□□□ -0.78
MKS1-207ENST00000578789 NKX6-2Q9C056 277 aaPredicted RBP10.19□□□□□ -0.78
MKS1-207ENST00000578789 GSN-AS1Q9NRJ2 163 aa10.19□□□□□ -0.78
MKS1-207ENST00000578789 FBLL1A6NHQ2 334 aaKnown RBP10.18□□□□□ -0.78
MKS1-207ENST00000578789 UBE2G2P60604 165 aa10.18□□□□□ -0.78
MKS1-207ENST00000578789 LGALSLQ3ZCW2 172 aaPredicted RBP10.18□□□□□ -0.78
MKS1-207ENST00000578789 TMEM88Q6PEY1 159 aa10.18□□□□□ -0.78
MKS1-207ENST00000578789 DPPA3Q6W0C5 159 aa10.18□□□□□ -0.78
MKS1-207ENST00000578789 MBD3L1Q8WWY6 194 aa10.18□□□□□ -0.78
MKS1-207ENST00000578789 C18orf15Q96N68 181 aa10.18□□□□□ -0.78
MKS1-207ENST00000578789 NDFIP1Q9BT67 221 aa10.18□□□□□ -0.78
MKS1-207ENST00000578789 TREM1Q9NP99 234 aa10.18□□□□□ -0.78
MKS1-207ENST00000578789 TP53TG3Q9ULZ0 132 aa10.18□□□□□ -0.78
MKS1-207ENST00000578789 PSG8Q9UQ74 426 aa10.18□□□□□ -0.78
MKS1-207ENST00000578789 ARL2-SNX15V9GYD0 113 aa10.18□□□□□ -0.78
MKS1-207ENST00000578789 DNAH6Q9C0G6 4158 aa10.18□□□□□ -0.78
MKS1-207ENST00000578789 GAGE12BA1L429 117 aa10.17□□□□□ -0.78
MKS1-207ENST00000578789 F5H768 121 aa10.17□□□□□ -0.78
MKS1-207ENST00000578789 F6UZH7 168 aa10.17□□□□□ -0.78
MKS1-207ENST00000578789 SPINK4O60575 86 aa10.17□□□□□ -0.78
MKS1-207ENST00000578789 GAGE7O76087 117 aa10.17□□□□□ -0.78
MKS1-207ENST00000578789 GAGE12FP0CL80 117 aa10.17□□□□□ -0.78
MKS1-207ENST00000578789 GAGE12GP0CL81 117 aa10.17□□□□□ -0.78
MKS1-207ENST00000578789 GAGE12IP0CL82 117 aa10.17□□□□□ -0.78
MKS1-207ENST00000578789 FLI1Q01543 452 aaPredicted RBP10.17□□□□□ -0.78
MKS1-207ENST00000578789 TDRG1Q3Y452 100 aa10.17□□□□□ -0.78
MKS1-207ENST00000578789 MUC21Q5SSG8 566 aa10.17□□□□□ -0.78
MKS1-207ENST00000578789 Q6ZTI0 123 aa10.17□□□□□ -0.78
MKS1-207ENST00000578789 AKAP14Q86UN6 197 aa10.17□□□□□ -0.78
MKS1-207ENST00000578789 SGK494Q96LW2 274 aa10.17□□□□□ -0.78
MKS1-207ENST00000578789 KLF12Q9Y4X4 402 aa10.17□□□□□ -0.78
MKS1-207ENST00000578789 hCG_2014768A0A024R1R8 64 aa10.16□□□□□ -0.78
MKS1-207ENST00000578789 TRAV21A0A0B4J279 112 aa10.16□□□□□ -0.78
MKS1-207ENST00000578789 PEX7O00628 323 aa10.16□□□□□ -0.78
MKS1-207ENST00000578789 P0DMU3 169 aa10.16□□□□□ -0.78
MKS1-207ENST00000578789 FAM231AP0DMU4 169 aa10.16□□□□□ -0.78
MKS1-207ENST00000578789 FAM231CP0DMU5 169 aa10.16□□□□□ -0.78
MKS1-207ENST00000578789 ZNF415Q09FC8 603 aa10.16□□□□□ -0.78
MKS1-207ENST00000578789 C15orf53Q8NAA6 179 aa10.16□□□□□ -0.78
MKS1-207ENST00000578789 FAM213BQ8TBF2 198 aa10.16□□□□□ -0.78
MKS1-207ENST00000578789 HIST1H2BAQ96A08 127 aa10.16□□□□□ -0.78
MKS1-207ENST00000578789 TCEAL7Q9BRU2 100 aa10.16□□□□□ -0.78
MKS1-207ENST00000578789 TRGV11A0A075B6L2 103 aa10.15□□□□□ -0.78
MKS1-207ENST00000578789 IFNA7P01567 189 aa10.15□□□□□ -0.78
MKS1-207ENST00000578789 LGALS9BQ3B8N2 356 aa10.15□□□□□ -0.78
MKS1-207ENST00000578789 FAM159AQ6UWV7 190 aa10.15□□□□□ -0.78
MKS1-207ENST00000578789 C8orf49Q96NF6 230 aa10.15□□□□□ -0.78
MKS1-207ENST00000578789 KMT2AQ03164 3969 aa10.14□□□□□ -0.79
MKS1-207ENST00000578789 TRGV1A0A0A0MS02 117 aa10.14□□□□□ -0.79
MKS1-207ENST00000578789 LCE2BO14633 110 aa10.14□□□□□ -0.79
MKS1-207ENST00000578789 TMEM183BQ1AE95 376 aa10.14□□□□□ -0.79
MKS1-207ENST00000578789 SAPCD1Q5SSQ6 148 aa10.14□□□□□ -0.79
MKS1-207ENST00000578789 PRNTQ86SH4 94 aa10.14□□□□□ -0.79
MKS1-207ENST00000578789 Q86TA4 180 aa10.14□□□□□ -0.79
MKS1-207ENST00000578789 TMEM183AQ8IXX5 376 aa10.14□□□□□ -0.79
MKS1-207ENST00000578789 SFT2D1Q8WV19 159 aa10.14□□□□□ -0.79
MKS1-207ENST00000578789 PFN1P07737 140 aaKnown RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms