RNA–Protein interactions for RNA: ENST00000578525.5

CDK5RAP3-208, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 564 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-208ENST00000578525 ABCA1O95477 2261 aa7.1□□□□□ -1.27
CDK5RAP3-208ENST00000578525 HRNRQ86YZ3 2850 aaPredicted RBP7.1□□□□□ -1.27
CDK5RAP3-208ENST00000578525 A0A096LNT2 108 aa7.1□□□□□ -1.27
CDK5RAP3-208ENST00000578525 TMEM89A2RUT3 159 aa7.1□□□□□ -1.27
CDK5RAP3-208ENST00000578525 K7EMT4 169 aa7.1□□□□□ -1.27
CDK5RAP3-208ENST00000578525 TNFRSF6BO95407 300 aa7.1□□□□□ -1.27
CDK5RAP3-208ENST00000578525 COX6B1P14854 86 aa7.1□□□□□ -1.27
CDK5RAP3-208ENST00000578525 G0S2P27469 103 aa7.1□□□□□ -1.27
CDK5RAP3-208ENST00000578525 PRR9Q5T870 116 aa7.1□□□□□ -1.27
CDK5RAP3-208ENST00000578525 SLC25A34Q6PIV7 304 aa7.1□□□□□ -1.27
CDK5RAP3-208ENST00000578525 PRSS57Q6UWY2 283 aa7.1□□□□□ -1.27
CDK5RAP3-208ENST00000578525 STPG4Q8N801 248 aa7.1□□□□□ -1.27
CDK5RAP3-208ENST00000578525 OR8A1Q8NGG7 326 aa7.1□□□□□ -1.27
CDK5RAP3-208ENST00000578525 PMCHL2Q9BQD1 86 aa7.1□□□□□ -1.27
CDK5RAP3-208ENST00000578525 MCRIP2Q9BUT9 160 aaKnown RBP7.1□□□□□ -1.27
CDK5RAP3-208ENST00000578525 NXT2Q9NPJ8 142 aaKnown RBP7.1□□□□□ -1.27
CDK5RAP3-208ENST00000578525 ATRXP46100 2492 aa7.09□□□□□ -1.27
CDK5RAP3-208ENST00000578525 ABCA2Q9BZC7 2435 aa7.09□□□□□ -1.27
CDK5RAP3-208ENST00000578525 TRAV21A0A0B4J279 112 aa7.09□□□□□ -1.27
CDK5RAP3-208ENST00000578525 TRBV7-9A0A0J9YWB2 115 aa7.09□□□□□ -1.27
CDK5RAP3-208ENST00000578525 DLEU1O43261 78 aa7.09□□□□□ -1.27
CDK5RAP3-208ENST00000578525 MED14OSP0DP75 135 aa7.09□□□□□ -1.27
CDK5RAP3-208ENST00000578525 HINT1P49773 126 aaPredicted RBP7.09□□□□□ -1.27
CDK5RAP3-208ENST00000578525 GAGE1Q13065 139 aa7.09□□□□□ -1.27
CDK5RAP3-208ENST00000578525 DEFB112Q30KQ8 113 aa7.09□□□□□ -1.27
CDK5RAP3-208ENST00000578525 ZFAND2AQ8N6M9 145 aa7.09□□□□□ -1.27
CDK5RAP3-208ENST00000578525 NRGNQ92686 78 aa7.09□□□□□ -1.27
CDK5RAP3-208ENST00000578525 DPF1Q92782 380 aa7.09□□□□□ -1.27
CDK5RAP3-208ENST00000578525 FAM19A4Q96LR4 140 aa7.09□□□□□ -1.27
CDK5RAP3-208ENST00000578525 RHPN1-AS1Q9BWJ2 59 aa7.09□□□□□ -1.27
CDK5RAP3-208ENST00000578525 PEF1Q9UBV8 284 aaKnown RBP7.09□□□□□ -1.27
CDK5RAP3-208ENST00000578525 SMPXQ9UHP9 88 aa7.09□□□□□ -1.27
CDK5RAP3-208ENST00000578525 GOLT1BQ9Y3E0 138 aa7.09□□□□□ -1.27
CDK5RAP3-208ENST00000578525 PRSS47A8MTI9 375 aa7.08□□□□□ -1.28
CDK5RAP3-208ENST00000578525 IGHV4-59P01825 116 aa7.08□□□□□ -1.28
CDK5RAP3-208ENST00000578525 FCER1GP30273 86 aa7.08□□□□□ -1.28
CDK5RAP3-208ENST00000578525 TFPI2P48307 235 aa7.08□□□□□ -1.28
CDK5RAP3-208ENST00000578525 TM4SF20Q53R12 229 aa7.08□□□□□ -1.28
CDK5RAP3-208ENST00000578525 SPANXN1Q5VSR9 72 aa7.08□□□□□ -1.28
CDK5RAP3-208ENST00000578525 SAMD13Q5VXD3 122 aa7.08□□□□□ -1.28
CDK5RAP3-208ENST00000578525 LCNL1Q6ZST4 164 aa7.08□□□□□ -1.28
CDK5RAP3-208ENST00000578525 APRG1Q8IVJ8 170 aa7.08□□□□□ -1.28
CDK5RAP3-208ENST00000578525 Q8N8P6 123 aa7.08□□□□□ -1.28
CDK5RAP3-208ENST00000578525 OR2K2Q8NGT1 345 aa7.08□□□□□ -1.28
CDK5RAP3-208ENST00000578525 IFI27L1Q96BM0 104 aa7.08□□□□□ -1.28
CDK5RAP3-208ENST00000578525 TMEM208Q9BTX3 173 aa7.08□□□□□ -1.28
CDK5RAP3-208ENST00000578525 DAZ1Q9NQZ3 744 aaKnown RBP7.08□□□□□ -1.28
CDK5RAP3-208ENST00000578525 UFC1Q9Y3C8 167 aa7.08□□□□□ -1.28
CDK5RAP3-208ENST00000578525 H3BVH4 76 aa7.07□□□□□ -1.28
CDK5RAP3-208ENST00000578525 GAS8-AS1O95177 125 aa7.07□□□□□ -1.28
CDK5RAP3-208ENST00000578525 COX8AP10176 69 aa7.07□□□□□ -1.28
CDK5RAP3-208ENST00000578525 EVI2AP22794 236 aa7.07□□□□□ -1.28
CDK5RAP3-208ENST00000578525 ID1P41134 155 aa7.07□□□□□ -1.28
CDK5RAP3-208ENST00000578525 LEPP41159 167 aa7.07□□□□□ -1.28
CDK5RAP3-208ENST00000578525 ASIPP42127 132 aa7.07□□□□□ -1.28
CDK5RAP3-208ENST00000578525 RPL11P62913 178 aaKnown RBP7.07□□□□□ -1.28
CDK5RAP3-208ENST00000578525 TMEM95Q3KNT9 176 aa7.07□□□□□ -1.28
CDK5RAP3-208ENST00000578525 DEFB125Q8N687 156 aa7.07□□□□□ -1.28
CDK5RAP3-208ENST00000578525 OR1N2Q8NGR9 330 aa7.07□□□□□ -1.28
CDK5RAP3-208ENST00000578525 MRAP2Q96G30 205 aa7.07□□□□□ -1.28
CDK5RAP3-208ENST00000578525 IGLV2-18A0A075B6J9 118 aa7.06□□□□□ -1.28
CDK5RAP3-208ENST00000578525 FSHBP01225 129 aa7.06□□□□□ -1.28
CDK5RAP3-208ENST00000578525 GATA1P15976 413 aaPredicted RBP7.06□□□□□ -1.28
CDK5RAP3-208ENST00000578525 PSMB8P28062 276 aa7.06□□□□□ -1.28
CDK5RAP3-208ENST00000578525 FXYD7P58549 80 aa7.06□□□□□ -1.28
CDK5RAP3-208ENST00000578525 Q6ZQT7 251 aa7.06□□□□□ -1.28
CDK5RAP3-208ENST00000578525 NRACQ8N912 160 aa7.06□□□□□ -1.28
CDK5RAP3-208ENST00000578525 WNK2Q9Y3S1 2297 aa7.06□□□□□ -1.28
CDK5RAP3-208ENST00000578525 ADGRG4Q8IZF6 3080 aa7.05□□□□□ -1.28
CDK5RAP3-208ENST00000578525 F6UB75 175 aa7.05□□□□□ -1.28
CDK5RAP3-208ENST00000578525 J3KRW8 73 aa7.05□□□□□ -1.28
CDK5RAP3-208ENST00000578525 TGFAP01135 160 aa7.05□□□□□ -1.28
CDK5RAP3-208ENST00000578525 PRB1P04280 392 aa7.05□□□□□ -1.28
CDK5RAP3-208ENST00000578525 RNASE4P34096 147 aaKnown RBP7.05□□□□□ -1.28
CDK5RAP3-208ENST00000578525 DEFB1P60022 68 aa7.05□□□□□ -1.28
CDK5RAP3-208ENST00000578525 ANXA2RQ3ZCQ2 193 aa7.05□□□□□ -1.28
CDK5RAP3-208ENST00000578525 ANKRD39Q53RE8 183 aa7.05□□□□□ -1.28
CDK5RAP3-208ENST00000578525 ORAOV1Q8WV07 137 aa7.05□□□□□ -1.28
CDK5RAP3-208ENST00000578525 TP73-AS1Q9UF72 201 aa7.05□□□□□ -1.28
CDK5RAP3-208ENST00000578525 DCHS1Q96JQ0 3298 aa7.04□□□□□ -1.28
CDK5RAP3-208ENST00000578525 IGKV3-7A0A075B6H7 116 aa7.04□□□□□ -1.28
CDK5RAP3-208ENST00000578525 ATP5LO75964 103 aa7.04□□□□□ -1.28
CDK5RAP3-208ENST00000578525 IGHV4-31P0DP07 118 aa7.04□□□□□ -1.28
CDK5RAP3-208ENST00000578525 S100A4P26447 101 aaKnown RBP7.04□□□□□ -1.28
CDK5RAP3-208ENST00000578525 PSMG4Q5JS54 123 aa7.04□□□□□ -1.28
CDK5RAP3-208ENST00000578525 BVES-AS1Q5T3Y7 98 aa7.04□□□□□ -1.28
CDK5RAP3-208ENST00000578525 C12orf54Q6X4T0 127 aa7.04□□□□□ -1.28
CDK5RAP3-208ENST00000578525 TMEM158Q8WZ71 300 aa7.04□□□□□ -1.28
CDK5RAP3-208ENST00000578525 DPH3P1Q9H4G8 78 aa7.04□□□□□ -1.28
CDK5RAP3-208ENST00000578525 BEX4Q9NWD9 120 aaPredicted RBP7.04□□□□□ -1.28
CDK5RAP3-208ENST00000578525 VPREB3Q9UKI3 123 aa7.04□□□□□ -1.28
CDK5RAP3-208ENST00000578525 KALRNO60229 2985 aa7.04□□□□□ -1.28
CDK5RAP3-208ENST00000578525 KLLNB2CW77 178 aa7.03□□□□□ -1.28
CDK5RAP3-208ENST00000578525 RNF223E7ERA6 249 aa7.03□□□□□ -1.28
CDK5RAP3-208ENST00000578525 M0R381 172 aa7.03□□□□□ -1.28
CDK5RAP3-208ENST00000578525 NUDT3O95989 172 aa7.03□□□□□ -1.28
CDK5RAP3-208ENST00000578525 ELANEP08246 267 aa7.03□□□□□ -1.28
CDK5RAP3-208ENST00000578525 LGALS1P09382 135 aaKnown RBP7.03□□□□□ -1.28
CDK5RAP3-208ENST00000578525 FGF6P10767 208 aa7.03□□□□□ -1.28
CDK5RAP3-208ENST00000578525 EDN2P20800 178 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms