RNA–Protein interactions for RNA: ENST00000576218.5

SMG6-220, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 902 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-220ENST00000576218 RYR2Q92736 4967 aa10.79□□□□□ -0.68
SMG6-220ENST00000576218 TRGV1A0A0A0MS02 117 aa10.79□□□□□ -0.68
SMG6-220ENST00000576218 SERTM2A0A1B0GWG4 89 aa10.79□□□□□ -0.68
SMG6-220ENST00000576218 ZNF324O75467 553 aaPredicted RBP10.79□□□□□ -0.68
SMG6-220ENST00000576218 NUDT3O95989 172 aa10.79□□□□□ -0.68
SMG6-220ENST00000576218 OR5I1Q13606 314 aa10.79□□□□□ -0.68
SMG6-220ENST00000576218 ANXA2RQ3ZCQ2 193 aa10.79□□□□□ -0.68
SMG6-220ENST00000576218 MUC21Q5SSG8 566 aa10.79□□□□□ -0.68
SMG6-220ENST00000576218 FAM159AQ6UWV7 190 aa10.79□□□□□ -0.68
SMG6-220ENST00000576218 TMED6Q8WW62 240 aa10.79□□□□□ -0.68
SMG6-220ENST00000576218 ATG101Q9BSB4 218 aa10.79□□□□□ -0.68
SMG6-220ENST00000576218 ZNF471Q9BX82 626 aaPredicted RBP10.79□□□□□ -0.68
SMG6-220ENST00000576218 TRAV8-1A0A0A6YYK1 113 aa10.78□□□□□ -0.68
SMG6-220ENST00000576218 A0A0D9SG52 128 aa10.78□□□□□ -0.68
SMG6-220ENST00000576218 IFNA7P01567 189 aa10.78□□□□□ -0.68
SMG6-220ENST00000576218 FGF8P55075 233 aaPredicted RBP10.78□□□□□ -0.68
SMG6-220ENST00000576218 SUMO1P63165 101 aaKnown RBP10.78□□□□□ -0.68
SMG6-220ENST00000576218 ZNF415Q09FC8 603 aa10.78□□□□□ -0.68
SMG6-220ENST00000576218 ZFP69Q49AA0 526 aa10.78□□□□□ -0.68
SMG6-220ENST00000576218 SSX7Q7RTT5 188 aa10.78□□□□□ -0.68
SMG6-220ENST00000576218 KCNRGQ8N5I3 272 aa10.78□□□□□ -0.68
SMG6-220ENST00000576218 ARL6IP6Q8N6S5 226 aa10.78□□□□□ -0.68
SMG6-220ENST00000576218 STOML3Q8TAV4 291 aa10.78□□□□□ -0.68
SMG6-220ENST00000576218 SGK494Q96LW2 274 aa10.78□□□□□ -0.68
SMG6-220ENST00000576218 LINC00467Q9BRT7 94 aa10.78□□□□□ -0.68
SMG6-220ENST00000576218 TREM1Q9NP99 234 aa10.78□□□□□ -0.68
SMG6-220ENST00000576218 MAP1LC3B2A6NCE7 125 aa10.77□□□□□ -0.69
SMG6-220ENST00000576218 HMSDA8MTL9 139 aa10.77□□□□□ -0.69
SMG6-220ENST00000576218 F6UZH7 168 aa10.77□□□□□ -0.69
SMG6-220ENST00000576218 UBE2G2P60604 165 aa10.77□□□□□ -0.69
SMG6-220ENST00000576218 EIF5AP63241 154 aaKnown RBP10.77□□□□□ -0.69
SMG6-220ENST00000576218 DAZ2Q13117 558 aaKnown RBP10.77□□□□□ -0.69
SMG6-220ENST00000576218 POM121L12Q8N7R1 296 aa10.77□□□□□ -0.69
SMG6-220ENST00000576218 MAP1LC3BQ9GZQ8 125 aa10.77□□□□□ -0.69
SMG6-220ENST00000576218 CYTL1Q9NRR1 136 aa10.77□□□□□ -0.69
SMG6-220ENST00000576218 PLECQ15149 4684 aaKnown RBP10.77□□□□□ -0.69
SMG6-220ENST00000576218 SACSQ9NZJ4 4579 aa10.77□□□□□ -0.69
SMG6-220ENST00000576218 TRGV11A0A075B6L2 103 aa10.76□□□□□ -0.69
SMG6-220ENST00000576218 BCL2L11O43521 198 aa10.76□□□□□ -0.69
SMG6-220ENST00000576218 TCRAP04437 139 aa10.76□□□□□ -0.69
SMG6-220ENST00000576218 TCL1AP56279 114 aa10.76□□□□□ -0.69
SMG6-220ENST00000576218 IBA57Q5T440 356 aaKnown RBP10.76□□□□□ -0.69
SMG6-220ENST00000576218 Q6ZTI0 123 aa10.76□□□□□ -0.69
SMG6-220ENST00000576218 CYB561D1Q8N8Q1 229 aa10.76□□□□□ -0.69
SMG6-220ENST00000576218 TP53TG3Q9ULZ0 132 aa10.76□□□□□ -0.69
SMG6-220ENST00000576218 TRAV21A0A0B4J279 112 aa10.75□□□□□ -0.69
SMG6-220ENST00000576218 A0A1W2PRE2 83 aa10.75□□□□□ -0.69
SMG6-220ENST00000576218 GGTLC3B5MD39 225 aa10.75□□□□□ -0.69
SMG6-220ENST00000576218 PPT1P50897 306 aa10.75□□□□□ -0.69
SMG6-220ENST00000576218 ZNF726P1Q15940 193 aa10.75□□□□□ -0.69
SMG6-220ENST00000576218 TMEM183BQ1AE95 376 aa10.75□□□□□ -0.69
SMG6-220ENST00000576218 Q6AWC8 147 aa10.75□□□□□ -0.69
SMG6-220ENST00000576218 Q6ZQT7 251 aa10.75□□□□□ -0.69
SMG6-220ENST00000576218 TMEM183AQ8IXX5 376 aa10.75□□□□□ -0.69
SMG6-220ENST00000576218 C11orf72Q8NBR9 251 aa10.75□□□□□ -0.69
SMG6-220ENST00000576218 OR11H4Q8NGC9 324 aa10.75□□□□□ -0.69
SMG6-220ENST00000576218 SUN5Q8TC36 379 aa10.75□□□□□ -0.69
SMG6-220ENST00000576218 TMPRSS5Q9H3S3 457 aa10.75□□□□□ -0.69
SMG6-220ENST00000576218 EPDR1Q9UM22 224 aa10.75□□□□□ -0.69
SMG6-220ENST00000576218 KLF12Q9Y4X4 402 aa10.75□□□□□ -0.69
SMG6-220ENST00000576218 A0A0J9YY99 117 aa10.74□□□□□ -0.69
SMG6-220ENST00000576218 PRNTQ86SH4 94 aa10.74□□□□□ -0.69
SMG6-220ENST00000576218 FAM213BQ8TBF2 198 aa10.74□□□□□ -0.69
SMG6-220ENST00000576218 MRPL16Q9NX20 251 aaKnown RBP10.74□□□□□ -0.69
SMG6-220ENST00000576218 PSG8Q9UQ74 426 aa10.74□□□□□ -0.69
SMG6-220ENST00000576218 TRAV26-1A0A087WT03 109 aa10.73□□□□□ -0.69
SMG6-220ENST00000576218 FBLL1A6NHQ2 334 aaKnown RBP10.73□□□□□ -0.69
SMG6-220ENST00000576218 TPT1P13693 172 aaKnown RBP10.73□□□□□ -0.69
SMG6-220ENST00000576218 FLI1Q01543 452 aaPredicted RBP10.73□□□□□ -0.69
SMG6-220ENST00000576218 LINC00612Q8N6U2 182 aa10.73□□□□□ -0.69
SMG6-220ENST00000576218 NKX6-2Q9C056 277 aaPredicted RBP10.73□□□□□ -0.69
SMG6-220ENST00000576218 SDF2L1Q9HCN8 221 aa10.73□□□□□ -0.69
SMG6-220ENST00000576218 hCG_2014768A0A024R1R8 64 aa10.72□□□□□ -0.69
SMG6-220ENST00000576218 A0A1B0GV50 99 aa10.72□□□□□ -0.69
SMG6-220ENST00000576218 UMAD1C9J7I0 102 aa10.72□□□□□ -0.69
SMG6-220ENST00000576218 SPINK4O60575 86 aa10.72□□□□□ -0.69
SMG6-220ENST00000576218 IGHV3-53P01767 116 aa10.72□□□□□ -0.69
SMG6-220ENST00000576218 SEC11BP0C7V7 166 aa10.72□□□□□ -0.69
SMG6-220ENST00000576218 CCL18P55774 89 aa10.72□□□□□ -0.69
SMG6-220ENST00000576218 RNF212Q495C1 297 aa10.72□□□□□ -0.69
SMG6-220ENST00000576218 CST9LP1Q5W188 147 aa10.72□□□□□ -0.69
SMG6-220ENST00000576218 TMUB2Q71RG4 321 aa10.72□□□□□ -0.69
SMG6-220ENST00000576218 TMEM75Q8N9X5 138 aa10.72□□□□□ -0.69
SMG6-220ENST00000576218 KCNS1Q96KK3 526 aa10.72□□□□□ -0.69
SMG6-220ENST00000576218 IGLV2-18A0A075B6J9 118 aa10.71□□□□□ -0.69
SMG6-220ENST00000576218 M0R2N4 97 aa10.71□□□□□ -0.69
SMG6-220ENST00000576218 PEX7O00628 323 aa10.71□□□□□ -0.69
SMG6-220ENST00000576218 GCGP01275 180 aa10.71□□□□□ -0.69
SMG6-220ENST00000576218 LGALS9BQ3B8N2 356 aa10.71□□□□□ -0.69
SMG6-220ENST00000576218 SMUG1Q53HV7 270 aa10.71□□□□□ -0.69
SMG6-220ENST00000576218 SAPCD1Q5SSQ6 148 aa10.71□□□□□ -0.69
SMG6-220ENST00000576218 SFT2D1Q8WV19 159 aa10.71□□□□□ -0.69
SMG6-220ENST00000576218 C8orf49Q96NF6 230 aa10.71□□□□□ -0.69
SMG6-220ENST00000576218 FAM74A7A6NL05 159 aa10.7□□□□□ -0.7
SMG6-220ENST00000576218 HOXA5P20719 270 aa10.7□□□□□ -0.7
SMG6-220ENST00000576218 FHITP49789 147 aa10.7□□□□□ -0.7
SMG6-220ENST00000576218 UBE2G1P62253 170 aa10.7□□□□□ -0.7
SMG6-220ENST00000576218 EIF5AL1Q6IS14 154 aaKnown RBP10.7□□□□□ -0.7
SMG6-220ENST00000576218 TVP23CQ96ET8 276 aa10.7□□□□□ -0.7
SMG6-220ENST00000576218 SPXQ9BT56 116 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms