RNA–Protein interactions for RNA: ENST00000572221.5

EDC4-204, Transcript of enhancer of mRNA decapping 4, humanhuman

TSL 2

Gene EDC4, Length 5,267 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC4-204ENST00000572221 ZNRF2Q8NHG8 242 aa16.36■□□□□ 0.21
EDC4-204ENST00000572221 HOXB4P17483 251 aaPredicted RBP16.36■□□□□ 0.21
EDC4-204ENST00000572221 MRPL53Q96EL3 112 aaKnown RBP16.36■□□□□ 0.21
EDC4-204ENST00000572221 IGHV3-16A0A0C4DH30 117 aa16.36■□□□□ 0.21
EDC4-204ENST00000572221 PRSS57Q6UWY2 283 aa16.36■□□□□ 0.21
EDC4-204ENST00000572221 ZNF114Q8NC26 417 aa16.36■□□□□ 0.21
EDC4-204ENST00000572221 LENEPQ9Y5L5 61 aa16.36■□□□□ 0.21
EDC4-204ENST00000572221 PYGO2Q9BRQ0 406 aa16.35■□□□□ 0.21
EDC4-204ENST00000572221 IGLC7A0M8Q6 106 aa16.35■□□□□ 0.21
EDC4-204ENST00000572221 SLAQ13239 276 aa16.35■□□□□ 0.21
EDC4-204ENST00000572221 CFHR3Q02985 330 aa16.35■□□□□ 0.21
EDC4-204ENST00000572221 FAM120AOSQ5T036 256 aa16.35■□□□□ 0.21
EDC4-204ENST00000572221 WT1P19544 449 aaPredicted RBP16.34■□□□□ 0.21
EDC4-204ENST00000572221 FOXI2Q6ZQN5 318 aa16.34■□□□□ 0.21
EDC4-204ENST00000572221 SMIM2Q9BVW6 85 aa16.34■□□□□ 0.21
EDC4-204ENST00000572221 TRAV12-2A0A075B6T6 113 aa16.34■□□□□ 0.21
EDC4-204ENST00000572221 IL15RAQ13261 267 aa16.34■□□□□ 0.21
EDC4-204ENST00000572221 TRAV8-3A0A0A6YYJ7 113 aa16.33■□□□□ 0.21
EDC4-204ENST00000572221 C20orf78Q9BR46 151 aa16.33■□□□□ 0.21
EDC4-204ENST00000572221 ANAPC1Q9H1A4 1944 aa16.33■□□□□ 0.21
EDC4-204ENST00000572221 LHBP01229 141 aa16.33■□□□□ 0.21
EDC4-204ENST00000572221 ZC2HC1AQ96GY0 325 aa16.33■□□□□ 0.2
EDC4-204ENST00000572221 SHANK1Q9Y566 2161 aa16.33■□□□□ 0.2
EDC4-204ENST00000572221 DEFB112Q30KQ8 113 aa16.32■□□□□ 0.2
EDC4-204ENST00000572221 RMI2Q96E14 147 aa16.32■□□□□ 0.2
EDC4-204ENST00000572221 LGALS9BQ3B8N2 356 aa16.32■□□□□ 0.2
EDC4-204ENST00000572221 LGALS9CQ6DKI2 356 aa16.32■□□□□ 0.2
EDC4-204ENST00000572221 WIPF3A6NGB9 483 aa16.32■□□□□ 0.2
EDC4-204ENST00000572221 UBE2V1Q13404 147 aa16.32■□□□□ 0.2
EDC4-204ENST00000572221 TSSC4Q9Y5U2 329 aaPredicted RBP16.32■□□□□ 0.2
EDC4-204ENST00000572221 CENPVL3A0A0U1RRI6 287 aa16.32■□□□□ 0.2
EDC4-204ENST00000572221 HELZP42694 1942 aaKnown RBP16.31■□□□□ 0.2
EDC4-204ENST00000572221 HLA-DRB4P13762 266 aa16.31■□□□□ 0.2
EDC4-204ENST00000572221 ZFAND6Q6FIF0 208 aa16.31■□□□□ 0.2
EDC4-204ENST00000572221 HLA-DRB4X5D2U9 266 aa16.31■□□□□ 0.2
EDC4-204ENST00000572221 VWC2LB2RUY7 222 aa16.31■□□□□ 0.2
EDC4-204ENST00000572221 TCF15Q12870 199 aa16.31■□□□□ 0.2
EDC4-204ENST00000572221 Q6ZSR3 168 aa16.31■□□□□ 0.2
EDC4-204ENST00000572221 C10orf91Q5T1B1 145 aa16.31■□□□□ 0.2
EDC4-204ENST00000572221 FAM208BQ5VWN6 2430 aa16.31■□□□□ 0.2
EDC4-204ENST00000572221 RBAKDNA6NC62 111 aa16.31■□□□□ 0.2
EDC4-204ENST00000572221 ZNF625Q96I27 306 aaPredicted RBP16.31■□□□□ 0.2
EDC4-204ENST00000572221 NDUFS7O75251 213 aa16.3■□□□□ 0.2
EDC4-204ENST00000572221 TTC28Q96AY4 2481 aa16.3■□□□□ 0.2
EDC4-204ENST00000572221 HIST1H4AP62805 103 aaKnown RBP16.3■□□□□ 0.2
EDC4-204ENST00000572221 VWC2Q2TAL6 325 aa16.3■□□□□ 0.2
EDC4-204ENST00000572221 ZGRF1Q86YA3 2104 aa16.3■□□□□ 0.2
EDC4-204ENST00000572221 LTAP01374 205 aa16.3■□□□□ 0.2
EDC4-204ENST00000572221 KRTAP27-1Q3LI81 207 aa16.3■□□□□ 0.2
EDC4-204ENST00000572221 NOTCH4Q99466 2003 aa16.29■□□□□ 0.2
EDC4-204ENST00000572221 KLF2Q9Y5W3 355 aaPredicted RBP16.29■□□□□ 0.2
EDC4-204ENST00000572221 GRNP28799 593 aaKnown RBP16.29■□□□□ 0.2
EDC4-204ENST00000572221 SIGLEC8Q9NYZ4 499 aa16.29■□□□□ 0.2
EDC4-204ENST00000572221 DKK4Q9UBT3 224 aa16.29■□□□□ 0.2
EDC4-204ENST00000572221 POLR3KQ9Y2Y1 108 aaPredicted RBP16.29■□□□□ 0.2
EDC4-204ENST00000572221 TRBV20-1A0A075B6N2 111 aa16.29■□□□□ 0.2
EDC4-204ENST00000572221 IGHV4-59P01825 116 aa16.29■□□□□ 0.2
EDC4-204ENST00000572221 MYLKQ15746 1914 aa16.28■□□□□ 0.2
EDC4-204ENST00000572221 DEFB113Q30KQ7 82 aa16.28■□□□□ 0.2
EDC4-204ENST00000572221 C9JAW5 83 aa16.28■□□□□ 0.2
EDC4-204ENST00000572221 F8VRH5 84 aa16.28■□□□□ 0.2
EDC4-204ENST00000572221 GAGE6Q13070 117 aa16.27■□□□□ 0.2
EDC4-204ENST00000572221 NPBQ8NG41 125 aa16.27■□□□□ 0.2
EDC4-204ENST00000572221 HOXD3P31249 432 aaPredicted RBP16.27■□□□□ 0.2
EDC4-204ENST00000572221 SPAG8Q99932 426 aaPredicted RBP16.27■□□□□ 0.2
EDC4-204ENST00000572221 TRAV26-2A0A0B4J265 109 aa16.27■□□□□ 0.19
EDC4-204ENST00000572221 NPYP01303 97 aa16.27■□□□□ 0.19
EDC4-204ENST00000572221 INAFM2P0DMQ5 153 aa16.27■□□□□ 0.19
EDC4-204ENST00000572221 FOXE3Q13461 319 aa16.27■□□□□ 0.19
EDC4-204ENST00000572221 OCIAD2Q56VL3 154 aa16.27■□□□□ 0.19
EDC4-204ENST00000572221 NDUFA12Q9UI09 145 aa16.27■□□□□ 0.19
EDC4-204ENST00000572221 IGHV1-24A0A0C4DH33 117 aa16.26■□□□□ 0.19
EDC4-204ENST00000572221 K7EMI3 77 aa16.26■□□□□ 0.19
EDC4-204ENST00000572221 HERVK_113P63121 156 aa16.26■□□□□ 0.19
EDC4-204ENST00000572221 RHOHQ15669 191 aa16.26■□□□□ 0.19
EDC4-204ENST00000572221 NKAPP1Q8N9T2 125 aa16.26■□□□□ 0.19
EDC4-204ENST00000572221 MUC6Q6W4X9 2439 aa16.26■□□□□ 0.19
EDC4-204ENST00000572221 A0A1B0GUS0 222 aa16.25■□□□□ 0.19
EDC4-204ENST00000572221 AGPAT4-IT1Q9H0P7 198 aa16.25■□□□□ 0.19
EDC4-204ENST00000572221 IGHV4-61A0A0C4DH41 118 aa16.25■□□□□ 0.19
EDC4-204ENST00000572221 PFN2P35080 140 aa16.25■□□□□ 0.19
EDC4-204ENST00000572221 ZNF493Q6ZR52 646 aa16.25■□□□□ 0.19
EDC4-204ENST00000572221 ZFHX2Q9C0A1 2572 aaPredicted RBP16.25■□□□□ 0.19
EDC4-204ENST00000572221 IGHV3-38A0A0C4DH36 116 aa16.25■□□□□ 0.19
EDC4-204ENST00000572221 SNHG12Q9BXW3 62 aa16.24■□□□□ 0.19
EDC4-204ENST00000572221 NUP210Q8TEM1 1887 aaPredicted RBP16.24■□□□□ 0.19
EDC4-204ENST00000572221 CCL24O00175 119 aa16.24■□□□□ 0.19
EDC4-204ENST00000572221 ZNF124Q15973 351 aa16.24■□□□□ 0.19
EDC4-204ENST00000572221 COX11Q9Y6N1 276 aa16.24■□□□□ 0.19
EDC4-204ENST00000572221 H3BMM0 161 aa16.24■□□□□ 0.19
EDC4-204ENST00000572221 MRPL35Q9NZE8 188 aaKnown RBP16.23■□□□□ 0.19
EDC4-204ENST00000572221 DYNAPQ8N1N2 210 aa16.23■□□□□ 0.19
EDC4-204ENST00000572221 FGF23Q9GZV9 251 aaPredicted RBP16.23■□□□□ 0.19
EDC4-204ENST00000572221 PTPRQQ9UMZ3 2332 aa16.23■□□□□ 0.19
EDC4-204ENST00000572221 Q71RC1 249 aaPredicted RBP16.23■□□□□ 0.19
EDC4-204ENST00000572221 DOCK9Q9BZ29 2069 aa16.23■□□□□ 0.19
EDC4-204ENST00000572221 IGLC2P0DOY2 106 aa16.22■□□□□ 0.19
EDC4-204ENST00000572221 IGLC3P0DOY3 106 aa16.22■□□□□ 0.19
EDC4-204ENST00000572221 RNF152Q8N8N0 203 aa16.22■□□□□ 0.19
EDC4-204ENST00000572221 DOCK11Q5JSL3 2073 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms