RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 CARHSP1Q9Y2V2 147 aaKnown RBP5.27□□□□□ -1.57
CNOT1-222ENST00000570139 PUS1Q9Y606 427 aaKnown RBP eCLIP5.27□□□□□ -1.57
CNOT1-222ENST00000570139 CSMD1Q96PZ7 3565 aa5.27□□□□□ -1.57
CNOT1-222ENST00000570139 A0A1B0GV50 99 aa5.26□□□□□ -1.57
CNOT1-222ENST00000570139 C11orf94C9JXX5 98 aa5.26□□□□□ -1.57
CNOT1-222ENST00000570139 HMGB3O15347 200 aaKnown RBP5.26□□□□□ -1.57
CNOT1-222ENST00000570139 ZNF253O75346 499 aa5.26□□□□□ -1.57
CNOT1-222ENST00000570139 SNAPINO95295 136 aa5.26□□□□□ -1.57
CNOT1-222ENST00000570139 LGALS1P09382 135 aaKnown RBP5.26□□□□□ -1.57
CNOT1-222ENST00000570139 RPL32P62910 135 aaKnown RBP5.26□□□□□ -1.57
CNOT1-222ENST00000570139 CCL20P78556 96 aa5.26□□□□□ -1.57
CNOT1-222ENST00000570139 SOHLH1Q5JUK2 328 aa5.26□□□□□ -1.57
CNOT1-222ENST00000570139 SAMD13Q5VXD3 122 aa5.26□□□□□ -1.57
CNOT1-222ENST00000570139 LYPD1Q8N2G4 141 aa5.26□□□□□ -1.57
CNOT1-222ENST00000570139 RXFP4Q8TDU9 374 aa5.26□□□□□ -1.57
CNOT1-222ENST00000570139 FAM167A-AS1Q96KT0 104 aa5.26□□□□□ -1.57
CNOT1-222ENST00000570139 METTL26Q96S19 204 aa5.26□□□□□ -1.57
CNOT1-222ENST00000570139 OPRPNQ99935 248 aaPredicted RBP5.26□□□□□ -1.57
CNOT1-222ENST00000570139 MCRIP2Q9BUT9 160 aaKnown RBP5.26□□□□□ -1.57
CNOT1-222ENST00000570139 SCRT1Q9BWW7 348 aa5.26□□□□□ -1.57
CNOT1-222ENST00000570139 SLC25A2Q9BXI2 301 aa5.26□□□□□ -1.57
CNOT1-222ENST00000570139 GNB4Q9HAV0 340 aa5.26□□□□□ -1.57
CNOT1-222ENST00000570139 CLEC5AQ9NY25 188 aa5.26□□□□□ -1.57
CNOT1-222ENST00000570139 DOK5Q9P104 306 aa5.26□□□□□ -1.57
CNOT1-222ENST00000570139 LINC00527Q9UJ94 153 aa5.26□□□□□ -1.57
CNOT1-222ENST00000570139 ZNF98A6NK75 572 aa5.25□□□□□ -1.57
CNOT1-222ENST00000570139 K7EMT4 169 aa5.25□□□□□ -1.57
CNOT1-222ENST00000570139 SRP19P09132 144 aaKnown RBP5.25□□□□□ -1.57
CNOT1-222ENST00000570139 HIST1H1EP10412 219 aaKnown RBP5.25□□□□□ -1.57
CNOT1-222ENST00000570139 NPPCP23582 126 aa5.25□□□□□ -1.57
CNOT1-222ENST00000570139 PSG9Q00887 426 aa5.25□□□□□ -1.57
CNOT1-222ENST00000570139 USF2Q15853 346 aaPredicted RBP5.25□□□□□ -1.57
CNOT1-222ENST00000570139 MRPL23Q16540 153 aaKnown RBP5.25□□□□□ -1.57
CNOT1-222ENST00000570139 SPATA31B1PQ5VZV4 182 aa5.25□□□□□ -1.57
CNOT1-222ENST00000570139 UFSP1Q6NVU6 142 aa5.25□□□□□ -1.57
CNOT1-222ENST00000570139 TOMM20LQ6UXN7 152 aa5.25□□□□□ -1.57
CNOT1-222ENST00000570139 C18orf65Q6ZTR6 163 aa5.25□□□□□ -1.57
CNOT1-222ENST00000570139 GPHB5Q86YW7 130 aa5.25□□□□□ -1.57
CNOT1-222ENST00000570139 LINC00052Q96N35 136 aa5.25□□□□□ -1.57
CNOT1-222ENST00000570139 PRELID1Q9Y255 219 aa5.25□□□□□ -1.57
CNOT1-222ENST00000570139 UFC1Q9Y3C8 167 aa5.25□□□□□ -1.57
CNOT1-222ENST00000570139 ZNF469Q96JG9 3925 aaPredicted RBP5.25□□□□□ -1.57
CNOT1-222ENST00000570139 ABCA1O95477 2261 aa5.25□□□□□ -1.57
CNOT1-222ENST00000570139 PLXNB1O43157 2135 aa5.24□□□□□ -1.57
CNOT1-222ENST00000570139 A8MWP6 167 aa5.24□□□□□ -1.57
CNOT1-222ENST00000570139 B4DEV8 164 aa5.24□□□□□ -1.57
CNOT1-222ENST00000570139 LGALS9O00182 355 aa5.24□□□□□ -1.57
CNOT1-222ENST00000570139 CRLF1O75462 422 aa5.24□□□□□ -1.57
CNOT1-222ENST00000570139 IGHV3-23P01764 117 aa5.24□□□□□ -1.57
CNOT1-222ENST00000570139 APOC3P02656 99 aa5.24□□□□□ -1.57
CNOT1-222ENST00000570139 CRYBB3P26998 211 aa5.24□□□□□ -1.57
CNOT1-222ENST00000570139 GALR1P47211 349 aa5.24□□□□□ -1.57
CNOT1-222ENST00000570139 RHEBQ15382 184 aa5.24□□□□□ -1.57
CNOT1-222ENST00000570139 REG3GQ6UW15 175 aa5.24□□□□□ -1.57
CNOT1-222ENST00000570139 CYB561D1Q8N8Q1 229 aa5.24□□□□□ -1.57
CNOT1-222ENST00000570139 CSNK1G2-AS1Q8NCQ2 148 aa5.24□□□□□ -1.57
CNOT1-222ENST00000570139 C4orf3Q8WVX3 66 aa5.24□□□□□ -1.57
CNOT1-222ENST00000570139 HIST1H2BAQ96A08 127 aa5.24□□□□□ -1.57
CNOT1-222ENST00000570139 FXYD5Q96DB9 178 aa5.24□□□□□ -1.57
CNOT1-222ENST00000570139 RARRES2Q99969 163 aa5.24□□□□□ -1.57
CNOT1-222ENST00000570139 SLC50A1Q9BRV3 221 aa5.24□□□□□ -1.57
CNOT1-222ENST00000570139 DAZ1Q9NQZ3 744 aaKnown RBP5.24□□□□□ -1.57
CNOT1-222ENST00000570139 S4R3C0 116 aa5.24□□□□□ -1.57
CNOT1-222ENST00000570139 MED13LQ71F56 2210 aa5.24□□□□□ -1.57
CNOT1-222ENST00000570139 SVEP1Q4LDE5 3571 aa5.24□□□□□ -1.57
CNOT1-222ENST00000570139 CCDC168Q8NDH2 2452 aa5.23□□□□□ -1.57
CNOT1-222ENST00000570139 TRBV19A0A075B6N1 114 aa5.23□□□□□ -1.57
CNOT1-222ENST00000570139 PPP5D1E7EU14 171 aa5.23□□□□□ -1.57
CNOT1-222ENST00000570139 NBEAP1P0C6P0 100 aa5.23□□□□□ -1.57
CNOT1-222ENST00000570139 IGLC2P0DOY2 106 aa5.23□□□□□ -1.57
CNOT1-222ENST00000570139 ADCYAP1P18509 176 aa5.23□□□□□ -1.57
CNOT1-222ENST00000570139 RIPPLY3P57055 190 aa5.23□□□□□ -1.57
CNOT1-222ENST00000570139 UBE2G2P60604 165 aa5.23□□□□□ -1.57
CNOT1-222ENST00000570139 DEFA5Q01523 94 aa5.23□□□□□ -1.57
CNOT1-222ENST00000570139 RPEL1Q2QD12 228 aa5.23□□□□□ -1.57
CNOT1-222ENST00000570139 ZNF329Q86UD4 541 aa5.23□□□□□ -1.57
CNOT1-222ENST00000570139 OR8I2Q8N0Y5 310 aa5.23□□□□□ -1.57
CNOT1-222ENST00000570139 C5orf17Q8NAS9 161 aa5.23□□□□□ -1.57
CNOT1-222ENST00000570139 SMIM12Q96EX1 92 aa5.23□□□□□ -1.57
CNOT1-222ENST00000570139 SMR3AQ99954 134 aa5.23□□□□□ -1.57
CNOT1-222ENST00000570139 SMIM7Q9BQ49 75 aa5.23□□□□□ -1.57
CNOT1-222ENST00000570139 OTORQ9NRC9 128 aa5.23□□□□□ -1.57
CNOT1-222ENST00000570139 NAT8Q9UHE5 227 aa5.23□□□□□ -1.57
CNOT1-222ENST00000570139 LY96Q9Y6Y9 160 aa5.23□□□□□ -1.57
CNOT1-222ENST00000570139 TRAV5A0A0B4J249 113 aa5.22□□□□□ -1.57
CNOT1-222ENST00000570139 ZNF727A8MUV8 499 aa5.22□□□□□ -1.57
CNOT1-222ENST00000570139 C9JCJ5 164 aa5.22□□□□□ -1.57
CNOT1-222ENST00000570139 C9JQL5 133 aa5.22□□□□□ -1.57
CNOT1-222ENST00000570139 MRPS12O15235 138 aaKnown RBP5.22□□□□□ -1.57
CNOT1-222ENST00000570139 IGHV3-11P01762 117 aa5.22□□□□□ -1.57
CNOT1-222ENST00000570139 OR10J4P0C629 311 aa5.22□□□□□ -1.57
CNOT1-222ENST00000570139 PYYP10082 97 aa5.22□□□□□ -1.57
CNOT1-222ENST00000570139 TAS2R60P59551 318 aa5.22□□□□□ -1.57
CNOT1-222ENST00000570139 LINC01006Q8NI28 216 aa5.22□□□□□ -1.57
CNOT1-222ENST00000570139 CMTM2Q8TAZ6 248 aa5.22□□□□□ -1.57
CNOT1-222ENST00000570139 TVP23CQ96ET8 276 aa5.22□□□□□ -1.57
CNOT1-222ENST00000570139 YTHDF2Q9Y5A9 579 aaKnown RBP5.22□□□□□ -1.57
CNOT1-222ENST00000570139 TSSC4Q9Y5U2 329 aaPredicted RBP5.22□□□□□ -1.57
CNOT1-222ENST00000570139 NOTCH2Q04721 2471 aa5.22□□□□□ -1.57
CNOT1-222ENST00000570139 A0A087WWC5 75 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 181.4 ms