RNA–Protein interactions for RNA: ENST00000569050.1

PKM-223, Transcript of pyruvate kinase M1/2, human

TSL 4

Gene PKM, Length 457 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKM-223	ENST00000569050	COX7A2P2	O60397	106 aa		11.26	□□□□□ -0.61
PKM-223	ENST00000569050	HYPM	O75409	117 aa		11.26	□□□□□ -0.61
PKM-223	ENST00000569050	CRYBA4	P53673	196 aa		11.26	□□□□□ -0.61
PKM-223	ENST00000569050	MRPL23	Q16540	153 aa	Known RBP	11.26	□□□□□ -0.61
PKM-223	ENST00000569050		Q6ZNX1	250 aa		11.26	□□□□□ -0.61
PKM-223	ENST00000569050	ST6GAL2	Q96JF0	529 aa		11.26	□□□□□ -0.61
PKM-223	ENST00000569050	NPCDR1	Q9BY65	106 aa		11.26	□□□□□ -0.61
PKM-223	ENST00000569050	PRO0255	Q9UI72	69 aa		11.26	□□□□□ -0.61
PKM-223	ENST00000569050	PXMP4	Q9Y6I8	212 aa		11.26	□□□□□ -0.61
PKM-223	ENST00000569050	C10orf126	Q8N4M7	172 aa		11.25	□□□□□ -0.61
PKM-223	ENST00000569050	C8orf49	Q96NF6	230 aa		11.25	□□□□□ -0.61
PKM-223	ENST00000569050	WDR61	Q9GZS3	305 aa	Known RBP	11.25	□□□□□ -0.61
PKM-223	ENST00000569050	ARV1	Q9H2C2	271 aa		11.25	□□□□□ -0.61
PKM-223	ENST00000569050	WFDC1	Q9HC57	220 aa		11.25	□□□□□ -0.61
PKM-223	ENST00000569050	MRPS12	O15235	138 aa	Known RBP	11.24	□□□□□ -0.61
PKM-223	ENST00000569050	SPINK4	O60575	86 aa		11.24	□□□□□ -0.61
PKM-223	ENST00000569050	SCX	Q7RTU7	201 aa		11.24	□□□□□ -0.61
PKM-223	ENST00000569050	ZNF680	Q8NEM1	530 aa		11.24	□□□□□ -0.61
PKM-223	ENST00000569050	AQP10	Q96PS8	301 aa		11.24	□□□□□ -0.61
PKM-223	ENST00000569050	ZNF331	Q9NQX6	463 aa	Predicted RBP	11.24	□□□□□ -0.61
PKM-223	ENST00000569050	KLF12	Q9Y4X4	402 aa		11.24	□□□□□ -0.61
PKM-223	ENST00000569050	RNF222	A6NCQ9	220 aa		11.23	□□□□□ -0.61
PKM-223	ENST00000569050	ARPC5	O15511	151 aa		11.23	□□□□□ -0.61
PKM-223	ENST00000569050	SNRPC	P09234	159 aa	Known RBP	11.23	□□□□□ -0.61
PKM-223	ENST00000569050	CT45A10	P0DMU9	189 aa		11.23	□□□□□ -0.61
PKM-223	ENST00000569050	PATE2	Q6UY27	113 aa		11.23	□□□□□ -0.61
PKM-223	ENST00000569050		Q6ZRG5	221 aa		11.23	□□□□□ -0.61
PKM-223	ENST00000569050	LINC00305	Q7Z4B0	112 aa		11.23	□□□□□ -0.61
PKM-223	ENST00000569050	INO80E	Q8NBZ0	244 aa	Predicted RBP	11.23	□□□□□ -0.61
PKM-223	ENST00000569050	SCGB1C1	Q8TD33	95 aa		11.23	□□□□□ -0.61
PKM-223	ENST00000569050	SLC39A9	Q9NUM3	307 aa		11.23	□□□□□ -0.61
PKM-223	ENST00000569050	TNFSF18	Q9UNG2	199 aa		11.23	□□□□□ -0.61
PKM-223	ENST00000569050	HHLA3	Q9XRX5	114 aa		11.23	□□□□□ -0.61
PKM-223	ENST00000569050	MPDU1	O75352	247 aa		11.22	□□□□□ -0.61
PKM-223	ENST00000569050	PLP1	P60201	277 aa		11.22	□□□□□ -0.61
PKM-223	ENST00000569050	FHL2	Q14192	279 aa		11.22	□□□□□ -0.61
PKM-223	ENST00000569050	GCSAML	Q5JQS6	135 aa		11.22	□□□□□ -0.61
PKM-223	ENST00000569050	MORN5	Q5VZ52	161 aa		11.22	□□□□□ -0.61
PKM-223	ENST00000569050	C10orf113	Q5VZT2	155 aa		11.22	□□□□□ -0.61
PKM-223	ENST00000569050		K7EQD1	137 aa		11.21	□□□□□ -0.61
PKM-223	ENST00000569050	CXCL2	P19875	107 aa		11.21	□□□□□ -0.61
PKM-223	ENST00000569050	SRI	P30626	198 aa		11.21	□□□□□ -0.61
PKM-223	ENST00000569050	LEP	P41159	167 aa		11.21	□□□□□ -0.61
PKM-223	ENST00000569050	RPL29	P47914	159 aa	Known RBP	11.21	□□□□□ -0.61
PKM-223	ENST00000569050	SLA	Q13239	276 aa		11.21	□□□□□ -0.61
PKM-223	ENST00000569050	WFDC2	Q14508	124 aa		11.21	□□□□□ -0.61
PKM-223	ENST00000569050	LCN15	Q6UWW0	184 aa		11.21	□□□□□ -0.61
PKM-223	ENST00000569050	TMEM37	Q8WXS4	190 aa		11.21	□□□□□ -0.61
PKM-223	ENST00000569050	VGLL1	Q99990	258 aa		11.21	□□□□□ -0.61
PKM-223	ENST00000569050	MRPL16	Q9NX20	251 aa	Known RBP	11.21	□□□□□ -0.61
PKM-223	ENST00000569050		A0A1B0GVG6	124 aa		11.2	□□□□□ -0.62
PKM-223	ENST00000569050	C17orf112	F2Z3M2	114 aa		11.2	□□□□□ -0.62
PKM-223	ENST00000569050	SLC17A3	O00476	420 aa		11.2	□□□□□ -0.62
PKM-223	ENST00000569050	TCL1A	P56279	114 aa		11.2	□□□□□ -0.62
PKM-223	ENST00000569050	PXDC1	Q5TGL8	231 aa		11.2	□□□□□ -0.62
PKM-223	ENST00000569050	HSD17B11	Q8NBQ5	300 aa		11.2	□□□□□ -0.62
PKM-223	ENST00000569050	OR1L4	Q8NGR5	311 aa		11.2	□□□□□ -0.62
PKM-223	ENST00000569050	ODF3	Q96PU9	254 aa		11.2	□□□□□ -0.62
PKM-223	ENST00000569050	PFDN5	Q99471	154 aa		11.2	□□□□□ -0.62
PKM-223	ENST00000569050	SLC50A1	Q9BRV3	221 aa		11.2	□□□□□ -0.62
PKM-223	ENST00000569050	KCNIP2	Q9NS61	270 aa		11.2	□□□□□ -0.62
PKM-223	ENST00000569050		H3BTX0	84 aa		11.19	□□□□□ -0.62
PKM-223	ENST00000569050	ZNF266	Q14584	549 aa		11.19	□□□□□ -0.62
PKM-223	ENST00000569050	ANXA2R	Q3ZCQ2	193 aa		11.19	□□□□□ -0.62
PKM-223	ENST00000569050	FFAR4	Q5NUL3	377 aa		11.19	□□□□□ -0.62
PKM-223	ENST00000569050		Q9HAA7	133 aa		11.19	□□□□□ -0.62
PKM-223	ENST00000569050	TRAV5	A0A0B4J249	113 aa		11.18	□□□□□ -0.62
PKM-223	ENST00000569050	ZNF415	Q09FC8	603 aa		11.18	□□□□□ -0.62
PKM-223	ENST00000569050	S100A7A	Q86SG5	101 aa		11.18	□□□□□ -0.62
PKM-223	ENST00000569050	EIF4E3	Q8N5X7	224 aa	Known RBP	11.18	□□□□□ -0.62
PKM-223	ENST00000569050	OR11H4	Q8NGC9	324 aa		11.18	□□□□□ -0.62
PKM-223	ENST00000569050	MRPL32	Q9BYC8	188 aa	Known RBP	11.18	□□□□□ -0.62
PKM-223	ENST00000569050	DNAJC4	Q9NNZ3	241 aa		11.18	□□□□□ -0.62
PKM-223	ENST00000569050	C7orf71	A4D174	169 aa		11.17	□□□□□ -0.62
PKM-223	ENST00000569050	IBA57-AS1	B1ANH7	110 aa		11.17	□□□□□ -0.62
PKM-223	ENST00000569050	EIF3G	O75821	320 aa	Known RBP eCLIP	11.17	□□□□□ -0.62
PKM-223	ENST00000569050	GYPE	P15421	78 aa		11.17	□□□□□ -0.62
PKM-223	ENST00000569050	LINC01620	Q4KN68	170 aa		11.17	□□□□□ -0.62
PKM-223	ENST00000569050	RPL7L1	Q6DKI1	246 aa	Known RBP	11.17	□□□□□ -0.62
PKM-223	ENST00000569050	AKAP14	Q86UN6	197 aa		11.17	□□□□□ -0.62
PKM-223	ENST00000569050	SLC25A5	P05141	298 aa	Known RBP	11.16	□□□□□ -0.62
PKM-223	ENST00000569050	MT1HL1	P0DM35	61 aa		11.16	□□□□□ -0.62
PKM-223	ENST00000569050	BTN1A1	Q13410	526 aa		11.16	□□□□□ -0.62
PKM-223	ENST00000569050	MIR17HG	Q75NE6	70 aa		11.16	□□□□□ -0.62
PKM-223	ENST00000569050	PCNP	Q8WW12	178 aa	Known RBP	11.16	□□□□□ -0.62
PKM-223	ENST00000569050	SH3BGRL3	Q9H299	93 aa		11.16	□□□□□ -0.62
PKM-223	ENST00000569050	TP53TG3	Q9ULZ0	132 aa		11.16	□□□□□ -0.62
PKM-223	ENST00000569050	IGHV3-38	A0A0C4DH36	116 aa		11.15	□□□□□ -0.62
PKM-223	ENST00000569050	SFTA3	P0C7M3	94 aa		11.15	□□□□□ -0.62
PKM-223	ENST00000569050	ATP6V0C	P27449	155 aa		11.15	□□□□□ -0.62
PKM-223	ENST00000569050	HNRNPA3	P51991	378 aa	Known RBP	11.15	□□□□□ -0.62
PKM-223	ENST00000569050	RAB2A	P61019	212 aa		11.15	□□□□□ -0.62
PKM-223	ENST00000569050	CD300C	Q08708	224 aa		11.15	□□□□□ -0.62
PKM-223	ENST00000569050	LINC01556	Q5JQF7	62 aa		11.15	□□□□□ -0.62
PKM-223	ENST00000569050	IBA57	Q5T440	356 aa	Known RBP	11.15	□□□□□ -0.62
PKM-223	ENST00000569050	BORCS7-ASMT	A0A0B4J1R7	106 aa		11.14	□□□□□ -0.63
PKM-223	ENST00000569050	TRGV4	A0A0C4DH28	118 aa		11.14	□□□□□ -0.63
PKM-223	ENST00000569050	KLLN	B2CW77	178 aa		11.14	□□□□□ -0.63
PKM-223	ENST00000569050	RS1	O15537	224 aa		11.14	□□□□□ -0.63
PKM-223	ENST00000569050	BPIFA4P	Q86YQ2	179 aa		11.14	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms