RNA–Protein interactions for RNA: ENST00000567060.5

CLN6-208, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 945 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-208ENST00000567060 TMEM208Q9BTX3 173 aa12.12□□□□□ -0.47
CLN6-208ENST00000567060 C7orf71A4D174 169 aa12.11□□□□□ -0.47
CLN6-208ENST00000567060 GFI1BQ5VTD9 330 aa12.11□□□□□ -0.47
CLN6-208ENST00000567060 C1orf158Q8N1D5 194 aa12.11□□□□□ -0.47
CLN6-208ENST00000567060 C11orf52Q96A22 123 aa12.11□□□□□ -0.47
CLN6-208ENST00000567060 NIPSNAP3BQ9BS92 247 aa12.11□□□□□ -0.47
CLN6-208ENST00000567060 C11orf68Q9H3H3 251 aaKnown RBP12.11□□□□□ -0.47
CLN6-208ENST00000567060 PSG8Q9UQ74 426 aa12.11□□□□□ -0.47
CLN6-208ENST00000567060 ZFP30Q9Y2G7 519 aa12.11□□□□□ -0.47
CLN6-208ENST00000567060 ALMS1Q8TCU4 4167 aa12.1□□□□□ -0.47
CLN6-208ENST00000567060 TMEM189A5PLL7 270 aa12.1□□□□□ -0.47
CLN6-208ENST00000567060 IGLV2-11P01706 119 aa12.1□□□□□ -0.47
CLN6-208ENST00000567060 AKR1C3P42330 323 aa12.1□□□□□ -0.47
CLN6-208ENST00000567060 TAS2R60P59551 318 aa12.1□□□□□ -0.47
CLN6-208ENST00000567060 UBE2G1P62253 170 aa12.1□□□□□ -0.47
CLN6-208ENST00000567060 TMEM183BQ1AE95 376 aa12.1□□□□□ -0.47
CLN6-208ENST00000567060 ZNF767PQ75MW2 155 aa12.1□□□□□ -0.47
CLN6-208ENST00000567060 PYGO2Q9BRQ0 406 aa12.1□□□□□ -0.47
CLN6-208ENST00000567060 LINC00467Q9BRT7 94 aa12.1□□□□□ -0.47
CLN6-208ENST00000567060 RETNQ9HD89 108 aa12.1□□□□□ -0.47
CLN6-208ENST00000567060 TREM1Q9NP99 234 aa12.1□□□□□ -0.47
CLN6-208ENST00000567060 X6R8D5 127 aa12.1□□□□□ -0.47
CLN6-208ENST00000567060 TRAV12-2A0A075B6T6 113 aa12.09□□□□□ -0.47
CLN6-208ENST00000567060 Q6AWC8 147 aa12.09□□□□□ -0.47
CLN6-208ENST00000567060 Q8TAT8 98 aa12.09□□□□□ -0.47
CLN6-208ENST00000567060 C2CD4CQ8TF44 421 aa12.09□□□□□ -0.47
CLN6-208ENST00000567060 TRAV8-1A0A0A6YYK1 113 aa12.08□□□□□ -0.48
CLN6-208ENST00000567060 LOC102723971A0A1B0GUV8 181 aa12.08□□□□□ -0.48
CLN6-208ENST00000567060 RAB14P61106 215 aa12.08□□□□□ -0.48
CLN6-208ENST00000567060 RRN3P1Q2M238 152 aa12.08□□□□□ -0.48
CLN6-208ENST00000567060 ZNF493Q6ZR52 646 aa12.08□□□□□ -0.48
CLN6-208ENST00000567060 COX8CQ7Z4L0 72 aa12.08□□□□□ -0.48
CLN6-208ENST00000567060 LINC01587Q99440 93 aa12.08□□□□□ -0.48
CLN6-208ENST00000567060 RBFOX3A6NFN3 312 aa12.07□□□□□ -0.48
CLN6-208ENST00000567060 ZNF324O75467 553 aaPredicted RBP12.07□□□□□ -0.48
CLN6-208ENST00000567060 PRB4P10163 310 aaPredicted RBP12.07□□□□□ -0.48
CLN6-208ENST00000567060 SMUG1Q53HV7 270 aa12.07□□□□□ -0.48
CLN6-208ENST00000567060 ZNF506Q5JVG8 444 aa12.07□□□□□ -0.48
CLN6-208ENST00000567060 PRNTQ86SH4 94 aa12.07□□□□□ -0.48
CLN6-208ENST00000567060 Q86TA4 180 aa12.07□□□□□ -0.48
CLN6-208ENST00000567060 Q8NAQ8 132 aa12.07□□□□□ -0.48
CLN6-208ENST00000567060 SMIM12Q96EX1 92 aa12.07□□□□□ -0.48
CLN6-208ENST00000567060 FAM210AQ96ND0 272 aa12.07□□□□□ -0.48
CLN6-208ENST00000567060 HERC2O95714 4834 aa12.06□□□□□ -0.48
CLN6-208ENST00000567060 TRAV12-3A0A0B4J271 114 aa12.06□□□□□ -0.48
CLN6-208ENST00000567060 TRAV21A0A0B4J279 112 aa12.06□□□□□ -0.48
CLN6-208ENST00000567060 TEX48A0A1B0GUV7 120 aa12.06□□□□□ -0.48
CLN6-208ENST00000567060 SCO2A0A1W2PP80 73 aa12.06□□□□□ -0.48
CLN6-208ENST00000567060 TMEM250H0YL14 139 aa12.06□□□□□ -0.48
CLN6-208ENST00000567060 LTAP01374 205 aa12.06□□□□□ -0.48
CLN6-208ENST00000567060 RNASE4P34096 147 aaKnown RBP12.06□□□□□ -0.48
CLN6-208ENST00000567060 IL17DQ8TAD2 202 aa12.06□□□□□ -0.48
CLN6-208ENST00000567060 SMDT1Q9H4I9 107 aa12.06□□□□□ -0.48
CLN6-208ENST00000567060 IGHV3OR16-12A0A075B7B8 117 aa12.05□□□□□ -0.48
CLN6-208ENST00000567060 RBMY1A1P0DJD3 496 aaKnown RBP12.05□□□□□ -0.48
CLN6-208ENST00000567060 RBMY1CP0DJD4 496 aa12.05□□□□□ -0.48
CLN6-208ENST00000567060 BTN1A1Q13410 526 aa12.05□□□□□ -0.48
CLN6-208ENST00000567060 KIR3DS1Q14943 382 aa12.05□□□□□ -0.48
CLN6-208ENST00000567060 RBMY1FQ15415 496 aaKnown RBP12.05□□□□□ -0.48
CLN6-208ENST00000567060 ANXA2RQ3ZCQ2 193 aa12.05□□□□□ -0.48
CLN6-208ENST00000567060 TVP23CQ96ET8 276 aa12.05□□□□□ -0.48
CLN6-208ENST00000567060 C16orf74Q96GX8 76 aa12.05□□□□□ -0.48
CLN6-208ENST00000567060 TRAV34A0A0B4J273 112 aa12.04□□□□□ -0.48
CLN6-208ENST00000567060 IGHV4-28A0A0C4DH34 117 aa12.04□□□□□ -0.48
CLN6-208ENST00000567060 J3KRW8 73 aa12.04□□□□□ -0.48
CLN6-208ENST00000567060 TMEM183AQ8IXX5 376 aa12.04□□□□□ -0.48
CLN6-208ENST00000567060 EIF4E3Q8N5X7 224 aaKnown RBP12.04□□□□□ -0.48
CLN6-208ENST00000567060 TMEM263Q8WUH6 116 aaKnown RBP12.04□□□□□ -0.48
CLN6-208ENST00000567060 LINC00479Q96M42 142 aa12.04□□□□□ -0.48
CLN6-208ENST00000567060 RGS13O14921 159 aa12.03□□□□□ -0.48
CLN6-208ENST00000567060 PFN1P07737 140 aaKnown RBP12.03□□□□□ -0.48
CLN6-208ENST00000567060 TDRG1Q3Y452 100 aa12.03□□□□□ -0.48
CLN6-208ENST00000567060 PRR9Q5T870 116 aa12.03□□□□□ -0.48
CLN6-208ENST00000567060 KCNS1Q96KK3 526 aa12.03□□□□□ -0.48
CLN6-208ENST00000567060 SGK494Q96LW2 274 aa12.03□□□□□ -0.48
CLN6-208ENST00000567060 EIF5A2Q9GZV4 153 aaKnown RBP12.03□□□□□ -0.48
CLN6-208ENST00000567060 MED9Q9NWA0 146 aa12.03□□□□□ -0.48
CLN6-208ENST00000567060 IGHV1OR15-1A0A075B7D0 117 aa12.02□□□□□ -0.49
CLN6-208ENST00000567060 A0A0J9YWU9 116 aa12.02□□□□□ -0.49
CLN6-208ENST00000567060 GCGP01275 180 aa12.02□□□□□ -0.49
CLN6-208ENST00000567060 RPL35P42766 123 aaKnown RBP12.02□□□□□ -0.49
CLN6-208ENST00000567060 CLLU1Q5K131 121 aa12.02□□□□□ -0.49
CLN6-208ENST00000567060 FAM159AQ6UWV7 190 aa12.02□□□□□ -0.49
CLN6-208ENST00000567060 FABP5P3A8MUU1 101 aa12.01□□□□□ -0.49
CLN6-208ENST00000567060 TOR2AQ5JU69 321 aa12.01□□□□□ -0.49
CLN6-208ENST00000567060 IBA57Q5T440 356 aaKnown RBP12.01□□□□□ -0.49
CLN6-208ENST00000567060 BAGE2Q86Y30 109 aa12.01□□□□□ -0.49
CLN6-208ENST00000567060 RNASE8Q8TDE3 154 aaKnown RBP12.01□□□□□ -0.49
CLN6-208ENST00000567060 C8orf49Q96NF6 230 aa12.01□□□□□ -0.49
CLN6-208ENST00000567060 BIN3Q9NQY0 253 aa12.01□□□□□ -0.49
CLN6-208ENST00000567060 KMT2AQ03164 3969 aa12.01□□□□□ -0.49
CLN6-208ENST00000567060 TRGV11A0A075B6L2 103 aa12□□□□□ -0.49
CLN6-208ENST00000567060 ZNF705GA8MUZ8 300 aaPredicted RBP12□□□□□ -0.49
CLN6-208ENST00000567060 IFITM2Q01629 132 aa12□□□□□ -0.49
CLN6-208ENST00000567060 PEA15Q15121 130 aa12□□□□□ -0.49
CLN6-208ENST00000567060 MLST8Q9BVC4 326 aa12□□□□□ -0.49
CLN6-208ENST00000567060 TP53TG3Q9ULZ0 132 aa12□□□□□ -0.49
CLN6-208ENST00000567060 CBY3A6NI87 242 aa11.99□□□□□ -0.49
CLN6-208ENST00000567060 LYRM9A8MSI8 78 aa11.99□□□□□ -0.49
CLN6-208ENST00000567060 C9JCJ5 164 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms