RNA–Protein interactions for RNA: ENST00000566126.5

CLK3-217, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 732 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-217ENST00000566126 TRBV19A0A075B6N1 114 aa10.44□□□□□ -0.74
CLK3-217ENST00000566126 A0A087WYN8 130 aa10.44□□□□□ -0.74
CLK3-217ENST00000566126 USP17L23D6RBM5 183 aa10.44□□□□□ -0.74
CLK3-217ENST00000566126 RRAS2P62070 204 aaPredicted RBP10.44□□□□□ -0.74
CLK3-217ENST00000566126 NIT1Q86X76 327 aa10.44□□□□□ -0.74
CLK3-217ENST00000566126 RAB2BQ8WUD1 216 aa10.44□□□□□ -0.74
CLK3-217ENST00000566126 OR51M1Q9H341 326 aa10.44□□□□□ -0.74
CLK3-217ENST00000566126 GOSR2O14653 212 aa10.43□□□□□ -0.74
CLK3-217ENST00000566126 C10orf113Q5VZT2 155 aa10.43□□□□□ -0.74
CLK3-217ENST00000566126 ZNF546Q86UE3 836 aa10.43□□□□□ -0.74
CLK3-217ENST00000566126 EXOC3-AS1Q8N2X6 119 aa10.43□□□□□ -0.74
CLK3-217ENST00000566126 Q8TAT8 98 aa10.43□□□□□ -0.74
CLK3-217ENST00000566126 NPVFQ9HCQ7 196 aa10.43□□□□□ -0.74
CLK3-217ENST00000566126 PRELID1Q9Y255 219 aa10.43□□□□□ -0.74
CLK3-217ENST00000566126 IGHV3-73A0A0B4J1V6 119 aa10.42□□□□□ -0.74
CLK3-217ENST00000566126 DISC1C4P0D8 188 aa10.42□□□□□ -0.74
CLK3-217ENST00000566126 AGPAT2O15120 278 aa10.42□□□□□ -0.74
CLK3-217ENST00000566126 LINC00694P0DN24 101 aa10.42□□□□□ -0.74
CLK3-217ENST00000566126 SLC25A6P12236 298 aa10.42□□□□□ -0.74
CLK3-217ENST00000566126 LSM3P62310 102 aaKnown RBP10.42□□□□□ -0.74
CLK3-217ENST00000566126 SRPXP78539 464 aa10.42□□□□□ -0.74
CLK3-217ENST00000566126 PRR3P79522 188 aaKnown RBP10.42□□□□□ -0.74
CLK3-217ENST00000566126 REG3GQ6UW15 175 aa10.42□□□□□ -0.74
CLK3-217ENST00000566126 DUXBA0A1W2PPF3 345 aa10.41□□□□□ -0.74
CLK3-217ENST00000566126 GNRH2O43555 120 aa10.41□□□□□ -0.74
CLK3-217ENST00000566126 POLR2GP62487 172 aaKnown RBP eCLIP10.41□□□□□ -0.74
CLK3-217ENST00000566126 ZNF266Q14584 549 aa10.41□□□□□ -0.74
CLK3-217ENST00000566126 CFAP126Q5VTH2 177 aa10.41□□□□□ -0.74
CLK3-217ENST00000566126 FAM159AQ6UWV7 190 aa10.41□□□□□ -0.74
CLK3-217ENST00000566126 SH3BGRL3Q9H299 93 aa10.41□□□□□ -0.74
CLK3-217ENST00000566126 C5orf51A6NDU8 294 aa10.4□□□□□ -0.74
CLK3-217ENST00000566126 SEC11BP0C7V7 166 aa10.4□□□□□ -0.74
CLK3-217ENST00000566126 CHTF8P0CG12 524 aa10.4□□□□□ -0.74
CLK3-217ENST00000566126 HIST1H1EP10412 219 aaKnown RBP10.4□□□□□ -0.74
CLK3-217ENST00000566126 ZNF138P52744 262 aa10.4□□□□□ -0.74
CLK3-217ENST00000566126 RPL19P84098 196 aaKnown RBP10.4□□□□□ -0.74
CLK3-217ENST00000566126 Q6AWC8 147 aa10.4□□□□□ -0.74
CLK3-217ENST00000566126 URGCP-MRPS24S4R325 110 aa10.4□□□□□ -0.74
CLK3-217ENST00000566126 TRBV7-9A0A0J9YWB2 115 aa10.39□□□□□ -0.75
CLK3-217ENST00000566126 FAM25AB3EWG3 89 aa10.39□□□□□ -0.75
CLK3-217ENST00000566126 FAM25CB3EWG5 89 aa10.39□□□□□ -0.75
CLK3-217ENST00000566126 FAM25GB3EWG6 89 aa10.39□□□□□ -0.75
CLK3-217ENST00000566126 FNDC10F2Z333 226 aa10.39□□□□□ -0.75
CLK3-217ENST00000566126 ANXA3P12429 323 aa10.39□□□□□ -0.75
CLK3-217ENST00000566126 RAB31Q13636 194 aa10.39□□□□□ -0.75
CLK3-217ENST00000566126 C7orf33Q8WU49 177 aa10.39□□□□□ -0.75
CLK3-217ENST00000566126 RNF185Q96GF1 192 aa10.39□□□□□ -0.75
CLK3-217ENST00000566126 NEDD8Q15843 81 aa10.38□□□□□ -0.75
CLK3-217ENST00000566126 LCE2DQ5TA82 110 aaPredicted RBP10.38□□□□□ -0.75
CLK3-217ENST00000566126 SPINK6Q6UWN8 80 aa10.38□□□□□ -0.75
CLK3-217ENST00000566126 CYB561D1Q8N8Q1 229 aa10.38□□□□□ -0.75
CLK3-217ENST00000566126 SPACA4Q8TDM5 124 aa10.38□□□□□ -0.75
CLK3-217ENST00000566126 DPH3Q96FX2 82 aa10.38□□□□□ -0.75
CLK3-217ENST00000566126 MGST2Q99735 147 aa10.38□□□□□ -0.75
CLK3-217ENST00000566126 SOSTQ9BQB4 213 aa10.38□□□□□ -0.75
CLK3-217ENST00000566126 C1orf43Q9BWL3 253 aa10.38□□□□□ -0.75
CLK3-217ENST00000566126 PLAC8Q9NZF1 115 aa10.38□□□□□ -0.75
CLK3-217ENST00000566126 CCDC59Q9P031 241 aaKnown RBP10.38□□□□□ -0.75
CLK3-217ENST00000566126 A0A087WWC5 75 aa10.37□□□□□ -0.75
CLK3-217ENST00000566126 GAGE12JA6NER3 117 aa10.37□□□□□ -0.75
CLK3-217ENST00000566126 GAGE1Q13065 139 aa10.37□□□□□ -0.75
CLK3-217ENST00000566126 GAGE4Q13068 117 aa10.37□□□□□ -0.75
CLK3-217ENST00000566126 GAGE5Q13069 117 aa10.37□□□□□ -0.75
CLK3-217ENST00000566126 GAGE13Q4V321 117 aa10.37□□□□□ -0.75
CLK3-217ENST00000566126 OR10G9Q8NGN4 311 aa10.37□□□□□ -0.75
CLK3-217ENST00000566126 PRRT1Q99946 306 aa10.37□□□□□ -0.75
CLK3-217ENST00000566126 PSENENQ9NZ42 101 aa10.37□□□□□ -0.75
CLK3-217ENST00000566126 EXTL2Q9UBQ6 330 aa10.37□□□□□ -0.75
CLK3-217ENST00000566126 Q9UF83 564 aa10.37□□□□□ -0.75
CLK3-217ENST00000566126 NAGKQ9UJ70 344 aa10.37□□□□□ -0.75
CLK3-217ENST00000566126 RABL2BQ9UNT1 228 aa10.37□□□□□ -0.75
CLK3-217ENST00000566126 CIDEAO60543 219 aa10.36□□□□□ -0.75
CLK3-217ENST00000566126 MGST1P10620 155 aaKnown RBP10.36□□□□□ -0.75
CLK3-217ENST00000566126 Q0VG73 95 aa10.36□□□□□ -0.75
CLK3-217ENST00000566126 PDE6HQ13956 83 aa10.36□□□□□ -0.75
CLK3-217ENST00000566126 ENHOQ6UWT2 76 aa10.36□□□□□ -0.75
CLK3-217ENST00000566126 IZUMO2Q6UXV1 221 aa10.36□□□□□ -0.75
CLK3-217ENST00000566126 TIMM9Q9Y5J7 89 aa10.36□□□□□ -0.75
CLK3-217ENST00000566126 HLA-DQA1P01909 254 aa10.35□□□□□ -0.75
CLK3-217ENST00000566126 TYMSP04818 313 aa10.35□□□□□ -0.75
CLK3-217ENST00000566126 METTL15P1P0C7V9 234 aa10.35□□□□□ -0.75
CLK3-217ENST00000566126 INPP1P49441 399 aa10.35□□□□□ -0.75
CLK3-217ENST00000566126 SSBP1Q04837 148 aaKnown RBP10.35□□□□□ -0.75
CLK3-217ENST00000566126 TMEM14EPQ6UXP3 125 aa10.35□□□□□ -0.75
CLK3-217ENST00000566126 MGAT4CQ9UBM8 478 aa10.35□□□□□ -0.75
CLK3-217ENST00000566126 VAX2Q9UIW0 290 aa10.35□□□□□ -0.75
CLK3-217ENST00000566126 PIGBOS1A0A0B4J2F0 54 aa10.34□□□□□ -0.75
CLK3-217ENST00000566126 AKAIN1P0CW23 69 aa10.34□□□□□ -0.75
CLK3-217ENST00000566126 PYYP10082 97 aa10.34□□□□□ -0.75
CLK3-217ENST00000566126 ELOBQ15370 118 aa10.34□□□□□ -0.75
CLK3-217ENST00000566126 ZNF876PQ49A33 203 aa10.34□□□□□ -0.75
CLK3-217ENST00000566126 CLVS1Q8IUQ0 354 aaPredicted RBP10.34□□□□□ -0.75
CLK3-217ENST00000566126 AAMDCQ9H7C9 122 aa10.34□□□□□ -0.75
CLK3-217ENST00000566126 TMEM14CQ9P0S9 112 aa10.34□□□□□ -0.75
CLK3-217ENST00000566126 ID3Q02535 119 aa10.33□□□□□ -0.76
CLK3-217ENST00000566126 ARL16Q0P5N6 197 aa10.33□□□□□ -0.76
CLK3-217ENST00000566126 SRSF9Q13242 221 aaKnown RBP eCLIP10.33□□□□□ -0.76
CLK3-217ENST00000566126 GTSF1Q8WW33 167 aa10.33□□□□□ -0.76
CLK3-217ENST00000566126 SCGB3A2Q96PL1 93 aa10.33□□□□□ -0.76
CLK3-217ENST00000566126 CHCHD7Q9BUK0 85 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 136.7 ms