RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 OR7C2O60412 319 aa3.13□□□□□ -1.91
LINC00561-201ENST00000565815 LHBP01229 141 aa3.13□□□□□ -1.91
LINC00561-201ENST00000565815 IGHV3-13P01766 116 aa3.13□□□□□ -1.91
LINC00561-201ENST00000565815 MT3P25713 68 aa3.13□□□□□ -1.91
LINC00561-201ENST00000565815 MEF2CQ06413 473 aaPredicted RBP3.13□□□□□ -1.91
LINC00561-201ENST00000565815 MMDQ15546 238 aa3.13□□□□□ -1.91
LINC00561-201ENST00000565815 MIR17HGQ75NE6 70 aa3.13□□□□□ -1.91
LINC00561-201ENST00000565815 GATD1Q8NB37 220 aa3.13□□□□□ -1.91
LINC00561-201ENST00000565815 C22orf15Q8WYQ4 148 aa3.13□□□□□ -1.91
LINC00561-201ENST00000565815 FMC1Q96HJ9 113 aa3.13□□□□□ -1.91
LINC00561-201ENST00000565815 DCTN5Q9BTE1 182 aa3.13□□□□□ -1.91
LINC00561-201ENST00000565815 TMEM70Q9BUB7 260 aa3.13□□□□□ -1.91
LINC00561-201ENST00000565815 TMEM191AQ9H0A3 160 aa3.13□□□□□ -1.91
LINC00561-201ENST00000565815 ZNF430Q9H8G1 570 aaPredicted RBP3.13□□□□□ -1.91
LINC00561-201ENST00000565815 TNFRSF19Q9NS68 423 aa3.13□□□□□ -1.91
LINC00561-201ENST00000565815 MOB4Q9Y3A3 225 aa3.13□□□□□ -1.91
LINC00561-201ENST00000565815 SPENQ96T58 3664 aaKnown RBP3.13□□□□□ -1.91
LINC00561-201ENST00000565815 CELSR1Q9NYQ6 3014 aa3.13□□□□□ -1.91
LINC00561-201ENST00000565815 IGKV1D-17A0A075B6S4 117 aa3.13□□□□□ -1.91
LINC00561-201ENST00000565815 IGHV2OR16-5A0A0B4J2B6 119 aa3.13□□□□□ -1.91
LINC00561-201ENST00000565815 IGHV2-70DA0A0C4DH43 119 aa3.13□□□□□ -1.91
LINC00561-201ENST00000565815 IGLC7A0M8Q6 106 aa3.13□□□□□ -1.91
LINC00561-201ENST00000565815 GGTLC3B5MD39 225 aa3.13□□□□□ -1.91
LINC00561-201ENST00000565815 PPBPP02775 128 aa3.13□□□□□ -1.91
LINC00561-201ENST00000565815 RNASE2P10153 161 aaKnown RBP3.13□□□□□ -1.91
LINC00561-201ENST00000565815 CEBPDP49716 269 aaPredicted RBP3.13□□□□□ -1.91
LINC00561-201ENST00000565815 UBE2L3P68036 154 aaKnown RBP3.13□□□□□ -1.91
LINC00561-201ENST00000565815 HBBP68871 147 aa3.13□□□□□ -1.91
LINC00561-201ENST00000565815 RHOGP84095 191 aa3.13□□□□□ -1.91
LINC00561-201ENST00000565815 COTL1Q14019 142 aa3.13□□□□□ -1.91
LINC00561-201ENST00000565815 Q6AWC8 147 aa3.13□□□□□ -1.91
LINC00561-201ENST00000565815 PVRIGQ6DKI7 326 aa3.13□□□□□ -1.91
LINC00561-201ENST00000565815 MRPL54Q6P161 138 aaKnown RBP3.13□□□□□ -1.91
LINC00561-201ENST00000565815 SLC25A48Q6ZT89 311 aaKnown RBP3.13□□□□□ -1.91
LINC00561-201ENST00000565815 S100A7AQ86SG5 101 aa3.13□□□□□ -1.91
LINC00561-201ENST00000565815 ZNF596Q8TC21 504 aa3.13□□□□□ -1.91
LINC00561-201ENST00000565815 NDFIP1Q9BT67 221 aa3.13□□□□□ -1.91
LINC00561-201ENST00000565815 HSPB8Q9UJY1 196 aa3.13□□□□□ -1.91
LINC00561-201ENST00000565815 TCRBV4S1A1TA0A5B7 111 aa3.13□□□□□ -1.91
LINC00561-201ENST00000565815 hADV38S2A0JD32 116 aa3.13□□□□□ -1.91
LINC00561-201ENST00000565815 PSMB11A5LHX3 300 aa3.13□□□□□ -1.91
LINC00561-201ENST00000565815 M0R2Z0 102 aa3.13□□□□□ -1.91
LINC00561-201ENST00000565815 COX7A2P2O60397 106 aa3.13□□□□□ -1.91
LINC00561-201ENST00000565815 LYZL6O75951 148 aa3.13□□□□□ -1.91
LINC00561-201ENST00000565815 CECR9P0C854 216 aa3.13□□□□□ -1.91
LINC00561-201ENST00000565815 SAA2P0DJI9 122 aaPredicted RBP3.13□□□□□ -1.91
LINC00561-201ENST00000565815 GLRXP35754 106 aa3.13□□□□□ -1.91
LINC00561-201ENST00000565815 CEACAM3P40198 252 aa3.13□□□□□ -1.91
LINC00561-201ENST00000565815 MYCNOSP40205 109 aa3.13□□□□□ -1.91
LINC00561-201ENST00000565815 PLP1P60201 277 aa3.13□□□□□ -1.91
LINC00561-201ENST00000565815 C17orf58Q2M2W7 97 aa3.13□□□□□ -1.91
LINC00561-201ENST00000565815 SPINK9Q5DT21 86 aa3.13□□□□□ -1.91
LINC00561-201ENST00000565815 TCTEX1D4Q5JR98 221 aa3.13□□□□□ -1.91
LINC00561-201ENST00000565815 SPATA31B1PQ5VZV4 182 aa3.13□□□□□ -1.91
LINC00561-201ENST00000565815 Q6ZR03 302 aa3.13□□□□□ -1.91
LINC00561-201ENST00000565815 ZNF833PQ6ZTB9 187 aa3.13□□□□□ -1.91
LINC00561-201ENST00000565815 PDPNQ86YL7 162 aa3.13□□□□□ -1.91
LINC00561-201ENST00000565815 LINC00311Q8N616 119 aa3.13□□□□□ -1.91
LINC00561-201ENST00000565815 UBALD1Q8TB05 177 aa3.13□□□□□ -1.91
LINC00561-201ENST00000565815 TMEM167AQ8TBQ9 72 aa3.13□□□□□ -1.91
LINC00561-201ENST00000565815 FAM167A-AS1Q96KT0 104 aa3.13□□□□□ -1.91
LINC00561-201ENST00000565815 GPR82Q96P67 336 aa3.13□□□□□ -1.91
LINC00561-201ENST00000565815 FAM103A1Q9BTL3 118 aaKnown RBP3.13□□□□□ -1.91
LINC00561-201ENST00000565815 PAXXQ9BUH6 204 aa3.13□□□□□ -1.91
LINC00561-201ENST00000565815 THYN1Q9P016 225 aa3.13□□□□□ -1.91
LINC00561-201ENST00000565815 RPUSD1Q9UJJ7 312 aaKnown RBP3.13□□□□□ -1.91
LINC00561-201ENST00000565815 LINC00312Q9Y6C7 94 aa3.13□□□□□ -1.91
LINC00561-201ENST00000565815 IGLV3-9A0A075B6K5 115 aa3.12□□□□□ -1.91
LINC00561-201ENST00000565815 IGHV3-43A0A0B4J1X8 118 aa3.12□□□□□ -1.91
LINC00561-201ENST00000565815 TEX50A0A1B0GTY4 177 aa3.12□□□□□ -1.91
LINC00561-201ENST00000565815 FBLL1A6NHQ2 334 aaKnown RBP3.12□□□□□ -1.91
LINC00561-201ENST00000565815 IGHV3-43DP0DP04 118 aa3.12□□□□□ -1.91
LINC00561-201ENST00000565815 MGST1P10620 155 aaKnown RBP3.12□□□□□ -1.91
LINC00561-201ENST00000565815 MFAP2P55001 183 aa3.12□□□□□ -1.91
LINC00561-201ENST00000565815 LMO4P61968 165 aa3.12□□□□□ -1.91
LINC00561-201ENST00000565815 EDDM3AQ14507 147 aa3.12□□□□□ -1.91
LINC00561-201ENST00000565815 BATFQ16520 125 aa3.12□□□□□ -1.91
LINC00561-201ENST00000565815 ALKBH6Q3KRA9 238 aa3.12□□□□□ -1.91
LINC00561-201ENST00000565815 RPL39P5Q59GN2 51 aa3.12□□□□□ -1.91
LINC00561-201ENST00000565815 CT45A1Q5HYN5 189 aa3.12□□□□□ -1.91
LINC00561-201ENST00000565815 TEX36Q5VZQ5 186 aa3.12□□□□□ -1.91
LINC00561-201ENST00000565815 C10orf113Q5VZT2 155 aa3.12□□□□□ -1.91
LINC00561-201ENST00000565815 FAM159AQ6UWV7 190 aa3.12□□□□□ -1.91
LINC00561-201ENST00000565815 ZNF826PQ6ZT77 177 aa3.12□□□□□ -1.91
LINC00561-201ENST00000565815 SMIM15Q7Z3B0 74 aa3.12□□□□□ -1.91
LINC00561-201ENST00000565815 SPATA12Q7Z6I5 190 aa3.12□□□□□ -1.91
LINC00561-201ENST00000565815 C5orf17Q8NAS9 161 aa3.12□□□□□ -1.91
LINC00561-201ENST00000565815 CT45A3Q8NHU0 189 aa3.12□□□□□ -1.91
LINC00561-201ENST00000565815 RFESDQ8TAC1 157 aa3.12□□□□□ -1.91
LINC00561-201ENST00000565815 ITLN1Q8WWA0 313 aa3.12□□□□□ -1.91
LINC00561-201ENST00000565815 TRGV9Q99603 122 aa3.12□□□□□ -1.91
LINC00561-201ENST00000565815 SPAG8Q99932 426 aaPredicted RBP3.12□□□□□ -1.91
LINC00561-201ENST00000565815 SLC25A2Q9BXI2 301 aa3.12□□□□□ -1.91
LINC00561-201ENST00000565815 RPP21Q9H633 154 aaKnown RBP3.12□□□□□ -1.91
LINC00561-201ENST00000565815 NDUFA4L2Q9NRX3 87 aa3.12□□□□□ -1.91
LINC00561-201ENST00000565815 TRAV3A0A0B4J244 114 aa3.12□□□□□ -1.91
LINC00561-201ENST00000565815 C2orf70A6NJV1 201 aa3.12□□□□□ -1.91
LINC00561-201ENST00000565815 LGALS7P47929 136 aa3.12□□□□□ -1.91
LINC00561-201ENST00000565815 FOXA3P55318 350 aaPredicted RBP3.12□□□□□ -1.91
LINC00561-201ENST00000565815 RPL8P62917 257 aaKnown RBP3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms