RNA–Protein interactions for RNA: ENST00000564593.1

LINC00560-201, long intergenic non-protein coding RNA 560, humanhuman

TSL 1 (best) BASIC

Gene LINC00560, Length 1,599 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00560-201ENST00000564593 CD99P14209 185 aa2.31□□□□□ -2.04
LINC00560-201ENST00000564593 TSPOP30536 169 aa2.31□□□□□ -2.04
LINC00560-201ENST00000564593 RPL35P42766 123 aaKnown RBP2.31□□□□□ -2.04
LINC00560-201ENST00000564593 C4orf26Q17RF5 130 aa2.31□□□□□ -2.04
LINC00560-201ENST00000564593 ACOT6Q3I5F7 207 aaPredicted RBP2.31□□□□□ -2.04
LINC00560-201ENST00000564593 AKIRIN2Q53H80 203 aa2.31□□□□□ -2.04
LINC00560-201ENST00000564593 KIAA2026Q5HYC2 2103 aa2.31□□□□□ -2.04
LINC00560-201ENST00000564593 ZNF818PQ6ZRF7 136 aa2.31□□□□□ -2.04
LINC00560-201ENST00000564593 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.31□□□□□ -2.04
LINC00560-201ENST00000564593 OR10P1Q8NGE3 313 aa2.31□□□□□ -2.04
LINC00560-201ENST00000564593 HIST1H2BAQ96A08 127 aa2.31□□□□□ -2.04
LINC00560-201ENST00000564593 PFDN5Q99471 154 aa2.31□□□□□ -2.04
LINC00560-201ENST00000564593 GGACTQ9BVM4 153 aa2.31□□□□□ -2.04
LINC00560-201ENST00000564593 OR51B6Q9H340 312 aa2.31□□□□□ -2.04
LINC00560-201ENST00000564593 OR51I2Q9H344 312 aa2.31□□□□□ -2.04
LINC00560-201ENST00000564593 PROK2Q9HC23 129 aa2.31□□□□□ -2.04
LINC00560-201ENST00000564593 ENY2Q9NPA8 101 aa2.31□□□□□ -2.04
LINC00560-201ENST00000564593 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.31□□□□□ -2.04
LINC00560-201ENST00000564593 ZNF586Q9NXT0 402 aa2.31□□□□□ -2.04
LINC00560-201ENST00000564593 PSENENQ9NZ42 101 aa2.31□□□□□ -2.04
LINC00560-201ENST00000564593 NAT8Q9UHE5 227 aa2.31□□□□□ -2.04
LINC00560-201ENST00000564593 ARL2-SNX15V9GYD0 113 aa2.31□□□□□ -2.04
LINC00560-201ENST00000564593 INTS1Q8N201 2190 aaKnown RBP2.3□□□□□ -2.04
LINC00560-201ENST00000564593 CACNA1BQ00975 2339 aa2.3□□□□□ -2.04
LINC00560-201ENST00000564593 SZT2Q5T011 3432 aa2.3□□□□□ -2.04
LINC00560-201ENST00000564593 TRAV9-1A0A075B6T8 112 aa2.3□□□□□ -2.04
LINC00560-201ENST00000564593 IGHV2-26A0A0B4J1V2 119 aa2.3□□□□□ -2.04
LINC00560-201ENST00000564593 A0A0B4J2C4 111 aa2.3□□□□□ -2.04
LINC00560-201ENST00000564593 IGKV1-12A0A0C4DH73 117 aa2.3□□□□□ -2.04
LINC00560-201ENST00000564593 A0A0G2JMM0 328 aa2.3□□□□□ -2.04
LINC00560-201ENST00000564593 CTXND1A0A1B0GTU2 59 aa2.3□□□□□ -2.04
LINC00560-201ENST00000564593 A0A1W2PPB8 328 aa2.3□□□□□ -2.04
LINC00560-201ENST00000564593 A0A1W2PRS3 328 aa2.3□□□□□ -2.04
LINC00560-201ENST00000564593 IGSF23A1L1A6 192 aa2.3□□□□□ -2.04
LINC00560-201ENST00000564593 MAP1LC3B2A6NCE7 125 aa2.3□□□□□ -2.04
LINC00560-201ENST00000564593 A8MWP4 228 aa2.3□□□□□ -2.04
LINC00560-201ENST00000564593 KIR3DP1A8MWS1 328 aa2.3□□□□□ -2.04
LINC00560-201ENST00000564593 PPP5D1E7EU14 171 aa2.3□□□□□ -2.04
LINC00560-201ENST00000564593 H7BYZ3 331 aa2.3□□□□□ -2.04
LINC00560-201ENST00000564593 CYB5BO43169 146 aa2.3□□□□□ -2.04
LINC00560-201ENST00000564593 CST7O76096 145 aa2.3□□□□□ -2.04
LINC00560-201ENST00000564593 HAND1O96004 215 aa2.3□□□□□ -2.04
LINC00560-201ENST00000564593 CA2P00918 260 aa2.3□□□□□ -2.04
LINC00560-201ENST00000564593 IGKV1D-12P01611 117 aa2.3□□□□□ -2.04
LINC00560-201ENST00000564593 IGHV3-53P01767 116 aa2.3□□□□□ -2.04
LINC00560-201ENST00000564593 CNTFRP26992 372 aa2.3□□□□□ -2.04
LINC00560-201ENST00000564593 DYNLT3P51808 116 aa2.3□□□□□ -2.04
LINC00560-201ENST00000564593 MEF2BQ02080 365 aaPredicted RBP2.3□□□□□ -2.04
LINC00560-201ENST00000564593 TNFRSF9Q07011 255 aa2.3□□□□□ -2.04
LINC00560-201ENST00000564593 SLC38A11Q08AI6 406 aa2.3□□□□□ -2.04
LINC00560-201ENST00000564593 CYP2G1PQ6ZSU1 146 aa2.3□□□□□ -2.04
LINC00560-201ENST00000564593 RPRMLQ8N4K4 120 aa2.3□□□□□ -2.04
LINC00560-201ENST00000564593 GATD1Q8NB37 220 aa2.3□□□□□ -2.04
LINC00560-201ENST00000564593 OR11L1Q8NGX0 322 aa2.3□□□□□ -2.04
LINC00560-201ENST00000564593 CLDND2Q8NHS1 167 aa2.3□□□□□ -2.04
LINC00560-201ENST00000564593 MRPL30Q8TCC3 161 aaKnown RBP2.3□□□□□ -2.04
LINC00560-201ENST00000564593 MBD3L1Q8WWY6 194 aa2.3□□□□□ -2.04
LINC00560-201ENST00000564593 ACY3Q96HD9 319 aa2.3□□□□□ -2.04
LINC00560-201ENST00000564593 SMIM7Q9BQ49 75 aa2.3□□□□□ -2.04
LINC00560-201ENST00000564593 OR2J1Q9GZK6 312 aa2.3□□□□□ -2.04
LINC00560-201ENST00000564593 MAP1LC3BQ9GZQ8 125 aa2.3□□□□□ -2.04
LINC00560-201ENST00000564593 WDR61Q9GZS3 305 aaKnown RBP2.3□□□□□ -2.04
LINC00560-201ENST00000564593 SLC39A9Q9NUM3 307 aa2.3□□□□□ -2.04
LINC00560-201ENST00000564593 GNG13Q9P2W3 67 aa2.3□□□□□ -2.04
LINC00560-201ENST00000564593 JPT1Q9UK76 154 aa2.3□□□□□ -2.04
LINC00560-201ENST00000564593 DSCAML1Q8TD84 2053 aa2.3□□□□□ -2.04
LINC00560-201ENST00000564593 DIDO1Q9BTC0 2240 aaKnown RBP2.3□□□□□ -2.04
LINC00560-201ENST00000564593 DOCK11Q5JSL3 2073 aa2.29□□□□□ -2.04
LINC00560-201ENST00000564593 MED13Q9UHV7 2174 aa2.29□□□□□ -2.04
LINC00560-201ENST00000564593 MKI67P46013 3256 aaKnown RBP2.29□□□□□ -2.04
LINC00560-201ENST00000564593 TRBV24-1A0A075B6N3 115 aa2.29□□□□□ -2.04
LINC00560-201ENST00000564593 UBE2L5PA0A1B0GUS4 154 aa2.29□□□□□ -2.04
LINC00560-201ENST00000564593 FAM24AA6NFZ4 105 aa2.29□□□□□ -2.04
LINC00560-201ENST00000564593 CEBPZOSA8MTT3 80 aa2.29□□□□□ -2.04
LINC00560-201ENST00000564593 ZNF727A8MUV8 499 aa2.29□□□□□ -2.04
LINC00560-201ENST00000564593 FNDC10F2Z333 226 aa2.29□□□□□ -2.04
LINC00560-201ENST00000564593 OR2H2O95918 312 aa2.29□□□□□ -2.04
LINC00560-201ENST00000564593 IFNA10P01566 189 aa2.29□□□□□ -2.04
LINC00560-201ENST00000564593 FABP1P07148 127 aa2.29□□□□□ -2.04
LINC00560-201ENST00000564593 SRP19P09132 144 aaKnown RBP2.29□□□□□ -2.04
LINC00560-201ENST00000564593 SCTP09683 121 aa2.29□□□□□ -2.04
LINC00560-201ENST00000564593 OR13C7P0DN81 318 aa2.29□□□□□ -2.04
LINC00560-201ENST00000564593 CBR1P16152 277 aa2.29□□□□□ -2.04
LINC00560-201ENST00000564593 GZMHP20718 246 aa2.29□□□□□ -2.04
LINC00560-201ENST00000564593 FGF7P21781 194 aa2.29□□□□□ -2.04
LINC00560-201ENST00000564593 SRP14P37108 136 aaKnown RBP2.29□□□□□ -2.04
LINC00560-201ENST00000564593 GABRA2P47869 451 aa2.29□□□□□ -2.04
LINC00560-201ENST00000564593 RANP62826 216 aaKnown RBP2.29□□□□□ -2.04
LINC00560-201ENST00000564593 FABP9Q0Z7S8 132 aa2.29□□□□□ -2.04
LINC00560-201ENST00000564593 LRRC75BQ2VPJ9 315 aa2.29□□□□□ -2.04
LINC00560-201ENST00000564593 HEPN1Q6WQI6 88 aa2.29□□□□□ -2.04
LINC00560-201ENST00000564593 Q6ZQT7 251 aa2.29□□□□□ -2.04
LINC00560-201ENST00000564593 C3orf22Q8N5N4 141 aa2.29□□□□□ -2.04
LINC00560-201ENST00000564593 CMTM2Q8TAZ6 248 aa2.29□□□□□ -2.04
LINC00560-201ENST00000564593 DTD1Q8TEA8 209 aa2.29□□□□□ -2.04
LINC00560-201ENST00000564593 MUCL1Q96DR8 90 aa2.29□□□□□ -2.04
LINC00560-201ENST00000564593 IMMP2LQ96T52 175 aa2.29□□□□□ -2.04
LINC00560-201ENST00000564593 OR2D2Q9H210 308 aa2.29□□□□□ -2.04
LINC00560-201ENST00000564593 SH3BGRL3Q9H299 93 aa2.29□□□□□ -2.04
LINC00560-201ENST00000564593 PRO3102Q9H379 93 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 173.5 ms