RNA–Protein interactions for RNA: ENST00000561304.5

ZEB1-223, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,383 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-223ENST00000561304 ZNRF2Q8NHG8 242 aa5.16□□□□□ -1.58
ZEB1-223ENST00000561304 PPP1R1CQ8WVI7 109 aa5.16□□□□□ -1.58
ZEB1-223ENST00000561304 MRPL53Q96EL3 112 aaKnown RBP5.16□□□□□ -1.58
ZEB1-223ENST00000561304 VGLL1Q99990 258 aa5.16□□□□□ -1.58
ZEB1-223ENST00000561304 AGPAT4-IT1Q9H0P7 198 aa5.16□□□□□ -1.58
ZEB1-223ENST00000561304 LINC00588Q9Y4M8 146 aa5.16□□□□□ -1.58
ZEB1-223ENST00000561304 C7orf71A4D174 169 aa5.15□□□□□ -1.59
ZEB1-223ENST00000561304 ZNF324O75467 553 aaPredicted RBP5.15□□□□□ -1.59
ZEB1-223ENST00000561304 MPC2O95563 127 aa5.15□□□□□ -1.59
ZEB1-223ENST00000561304 FAM122CQ6P4D5 195 aa5.15□□□□□ -1.59
ZEB1-223ENST00000561304 ZFAND2AQ8N6M9 145 aa5.15□□□□□ -1.59
ZEB1-223ENST00000561304 Q8TAT8 98 aa5.15□□□□□ -1.59
ZEB1-223ENST00000561304 ATP5SQ99766 215 aa5.15□□□□□ -1.59
ZEB1-223ENST00000561304 KRTAP1-5Q9BYS1 174 aa5.15□□□□□ -1.59
ZEB1-223ENST00000561304 SMIM3Q9BZL3 60 aa5.15□□□□□ -1.59
ZEB1-223ENST00000561304 SLC25A31Q9H0C2 315 aa5.15□□□□□ -1.59
ZEB1-223ENST00000561304 TMPRSS5Q9H3S3 457 aa5.15□□□□□ -1.59
ZEB1-223ENST00000561304 WFDC1Q9HC57 220 aa5.15□□□□□ -1.59
ZEB1-223ENST00000561304 GSN-AS1Q9NRJ2 163 aa5.15□□□□□ -1.59
ZEB1-223ENST00000561304 MBD2Q9UBB5 411 aa5.15□□□□□ -1.59
ZEB1-223ENST00000561304 TP53TG3Q9ULZ0 132 aa5.15□□□□□ -1.59
ZEB1-223ENST00000561304 HSPB11Q9Y547 144 aa5.15□□□□□ -1.59
ZEB1-223ENST00000561304 TIMM9Q9Y5J7 89 aa5.15□□□□□ -1.59
ZEB1-223ENST00000561304 TRAV26-1A0A087WT03 109 aa5.14□□□□□ -1.59
ZEB1-223ENST00000561304 A0A0J9YY99 117 aa5.14□□□□□ -1.59
ZEB1-223ENST00000561304 RLN2P04090 185 aa5.14□□□□□ -1.59
ZEB1-223ENST00000561304 SLC25A5P05141 298 aaKnown RBP5.14□□□□□ -1.59
ZEB1-223ENST00000561304 CRISP2P16562 243 aa5.14□□□□□ -1.59
ZEB1-223ENST00000561304 C9orf47Q6ZRZ4 202 aa5.14□□□□□ -1.59
ZEB1-223ENST00000561304 PYGO2Q9BRQ0 406 aa5.14□□□□□ -1.59
ZEB1-223ENST00000561304 ATG101Q9BSB4 218 aa5.14□□□□□ -1.59
ZEB1-223ENST00000561304 PAXXQ9BUH6 204 aa5.14□□□□□ -1.59
ZEB1-223ENST00000561304 MRPL32Q9BYC8 188 aaKnown RBP5.14□□□□□ -1.59
ZEB1-223ENST00000561304 OR51M1Q9H341 326 aa5.14□□□□□ -1.59
ZEB1-223ENST00000561304 FUT9Q9Y231 359 aa5.14□□□□□ -1.59
ZEB1-223ENST00000561304 PRELID1Q9Y255 219 aa5.14□□□□□ -1.59
ZEB1-223ENST00000561304 ABCA13Q86UQ4 5058 aa5.13□□□□□ -1.59
ZEB1-223ENST00000561304 NBDYA0A0U1RRE5 68 aa5.13□□□□□ -1.59
ZEB1-223ENST00000561304 SNURFLB1AK76 121 aa5.13□□□□□ -1.59
ZEB1-223ENST00000561304 SSNA1O43805 119 aa5.13□□□□□ -1.59
ZEB1-223ENST00000561304 OR7C2O60412 319 aa5.13□□□□□ -1.59
ZEB1-223ENST00000561304 NBEAP1P0C6P0 100 aa5.13□□□□□ -1.59
ZEB1-223ENST00000561304 RNASE4P34096 147 aaKnown RBP5.13□□□□□ -1.59
ZEB1-223ENST00000561304 CYCSP99999 105 aaKnown RBP5.13□□□□□ -1.59
ZEB1-223ENST00000561304 DAZ2Q13117 558 aaKnown RBP5.13□□□□□ -1.59
ZEB1-223ENST00000561304 OR5I1Q13606 314 aa5.13□□□□□ -1.59
ZEB1-223ENST00000561304 FFAR4Q5NUL3 377 aa5.13□□□□□ -1.59
ZEB1-223ENST00000561304 C1orf134Q5TEV5 83 aa5.13□□□□□ -1.59
ZEB1-223ENST00000561304 SSX7Q7RTT5 188 aa5.13□□□□□ -1.59
ZEB1-223ENST00000561304 ZNF575Q86XF7 245 aa5.13□□□□□ -1.59
ZEB1-223ENST00000561304 CCDC28AQ8IWP9 274 aa5.13□□□□□ -1.59
ZEB1-223ENST00000561304 VSIG2Q96IQ7 327 aa5.13□□□□□ -1.59
ZEB1-223ENST00000561304 LINC00477Q96M19 166 aa5.13□□□□□ -1.59
ZEB1-223ENST00000561304 AAMDCQ9H7C9 122 aa5.13□□□□□ -1.59
ZEB1-223ENST00000561304 ZNF492Q9P255 531 aa5.13□□□□□ -1.59
ZEB1-223ENST00000561304 KLF12Q9Y4X4 402 aa5.13□□□□□ -1.59
ZEB1-223ENST00000561304 ALG5Q9Y673 324 aa5.13□□□□□ -1.59
ZEB1-223ENST00000561304 TRGV1A0A0A0MS02 117 aa5.12□□□□□ -1.59
ZEB1-223ENST00000561304 GPX1P07203 203 aa5.12□□□□□ -1.59
ZEB1-223ENST00000561304 M6PRP20645 277 aa5.12□□□□□ -1.59
ZEB1-223ENST00000561304 RPL12P30050 165 aaKnown RBP5.12□□□□□ -1.59
ZEB1-223ENST00000561304 TCL1AP56279 114 aa5.12□□□□□ -1.59
ZEB1-223ENST00000561304 FAM3BP58499 235 aaPredicted RBP5.12□□□□□ -1.59
ZEB1-223ENST00000561304 DEFA1P59665 94 aa5.12□□□□□ -1.59
ZEB1-223ENST00000561304 DEFA3P59666 94 aa5.12□□□□□ -1.59
ZEB1-223ENST00000561304 RANP62826 216 aaKnown RBP5.12□□□□□ -1.59
ZEB1-223ENST00000561304 UBE2L3P68036 154 aaKnown RBP5.12□□□□□ -1.59
ZEB1-223ENST00000561304 RNF151Q2KHN1 245 aa5.12□□□□□ -1.59
ZEB1-223ENST00000561304 ANXA2RQ3ZCQ2 193 aa5.12□□□□□ -1.59
ZEB1-223ENST00000561304 EIF4E3Q8N5X7 224 aaKnown RBP5.12□□□□□ -1.59
ZEB1-223ENST00000561304 RXFP4Q8TDU9 374 aa5.12□□□□□ -1.59
ZEB1-223ENST00000561304 GNPNAT1Q96EK6 184 aaPredicted RBP5.12□□□□□ -1.59
ZEB1-223ENST00000561304 LINC00467Q9BRT7 94 aa5.12□□□□□ -1.59
ZEB1-223ENST00000561304 Q9H3A6 140 aa5.12□□□□□ -1.59
ZEB1-223ENST00000561304 KCNIP2Q9NS61 270 aa5.12□□□□□ -1.59
ZEB1-223ENST00000561304 C17orf112F2Z3M2 114 aa5.11□□□□□ -1.59
ZEB1-223ENST00000561304 SPINK4O60575 86 aa5.11□□□□□ -1.59
ZEB1-223ENST00000561304 ZNF138P52744 262 aa5.11□□□□□ -1.59
ZEB1-223ENST00000561304 CCL18P55774 89 aa5.11□□□□□ -1.59
ZEB1-223ENST00000561304 RAB2AP61019 212 aa5.11□□□□□ -1.59
ZEB1-223ENST00000561304 ESRGQ1W209 222 aa5.11□□□□□ -1.59
ZEB1-223ENST00000561304 TMEM78Q5T7P6 136 aa5.11□□□□□ -1.59
ZEB1-223ENST00000561304 ZNF680Q8NEM1 530 aa5.11□□□□□ -1.59
ZEB1-223ENST00000561304 MRPL16Q9NX20 251 aaKnown RBP5.11□□□□□ -1.59
ZEB1-223ENST00000561304 IGHV1OR15-1A0A075B7D0 117 aa5.1□□□□□ -1.59
ZEB1-223ENST00000561304 A0A096LPF7 62 aa5.1□□□□□ -1.59
ZEB1-223ENST00000561304 DIRC3C9JPN6 131 aa5.1□□□□□ -1.59
ZEB1-223ENST00000561304 HMGB3O15347 200 aaKnown RBP5.1□□□□□ -1.59
ZEB1-223ENST00000561304 IGHV3-53P01767 116 aa5.1□□□□□ -1.59
ZEB1-223ENST00000561304 NMBP08949 121 aa5.1□□□□□ -1.59
ZEB1-223ENST00000561304 PET100P0DJ07 73 aa5.1□□□□□ -1.59
ZEB1-223ENST00000561304 KHDC3LQ587J8 217 aa5.1□□□□□ -1.59
ZEB1-223ENST00000561304 MUC21Q5SSG8 566 aa5.1□□□□□ -1.59
ZEB1-223ENST00000561304 IBA57Q5T440 356 aaKnown RBP5.1□□□□□ -1.59
ZEB1-223ENST00000561304 C6orf223Q8N319 242 aa5.1□□□□□ -1.59
ZEB1-223ENST00000561304 C18orf15Q96N68 181 aa5.1□□□□□ -1.59
ZEB1-223ENST00000561304 TRGV2A0A075B6R0 118 aa5.09□□□□□ -1.59
ZEB1-223ENST00000561304 TRAV8-1A0A0A6YYK1 113 aa5.09□□□□□ -1.59
ZEB1-223ENST00000561304 RBAKDNA6NC62 111 aa5.09□□□□□ -1.59
ZEB1-223ENST00000561304 H3BNG1 76 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 162.7 ms