RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 CDC42BPAQ5VT25 1732 aa1.26□□□□□ -2.21
RTF1-207ENST00000561076 NWD2Q9ULI1 1742 aa1.26□□□□□ -2.21
RTF1-207ENST00000561076 EIF2AK4Q9P2K8 1649 aaKnown RBP1.26□□□□□ -2.21
RTF1-207ENST00000561076 TULP4Q9NRJ4 1543 aa1.26□□□□□ -2.21
RTF1-207ENST00000561076 C10orf71Q711Q0 1435 aa1.26□□□□□ -2.21
RTF1-207ENST00000561076 NSD3Q9BZ95 1437 aa1.26□□□□□ -2.21
RTF1-207ENST00000561076 TMSB15BA0A087X1C1 80 aa1.26□□□□□ -2.21
RTF1-207ENST00000561076 IGKV2-24A0A0C4DH68 120 aa1.26□□□□□ -2.21
RTF1-207ENST00000561076 KRTAP9-6A0A140TA67 174 aa1.26□□□□□ -2.21
RTF1-207ENST00000561076 TCRBV4S1A1TA0A5B7 111 aa1.26□□□□□ -2.21
RTF1-207ENST00000561076 KRTAP9-7A8MTY7 169 aa1.26□□□□□ -2.21
RTF1-207ENST00000561076 MCRIP1C9JLW8 97 aa1.26□□□□□ -2.21
RTF1-207ENST00000561076 M0R2P5 195 aa1.26□□□□□ -2.21
RTF1-207ENST00000561076 GEMIN2O14893 280 aaKnown RBP1.26□□□□□ -2.21
RTF1-207ENST00000561076 GAS8-AS1O95177 125 aa1.26□□□□□ -2.21
RTF1-207ENST00000561076 CD3DP04234 171 aa1.26□□□□□ -2.21
RTF1-207ENST00000561076 SHBGP04278 402 aa1.26□□□□□ -2.21
RTF1-207ENST00000561076 LINC00032P0C843 101 aa1.26□□□□□ -2.21
RTF1-207ENST00000561076 FOXF1Q12946 379 aa1.26□□□□□ -2.21
RTF1-207ENST00000561076 CATR1Q13166 79 aa1.26□□□□□ -2.21
RTF1-207ENST00000561076 ELOBQ15370 118 aa1.26□□□□□ -2.21
RTF1-207ENST00000561076 LCE5AQ5TCM9 118 aa1.26□□□□□ -2.21
RTF1-207ENST00000561076 C12orf73Q69YU5 71 aa1.26□□□□□ -2.21
RTF1-207ENST00000561076 OR2T2Q6IF00 324 aa1.26□□□□□ -2.21
RTF1-207ENST00000561076 UNQ5815/PRO19632Q6UWF5 114 aa1.26□□□□□ -2.21
RTF1-207ENST00000561076 ATP11AUNQ6ZP68 121 aa1.26□□□□□ -2.21
RTF1-207ENST00000561076 ZNF826PQ6ZT77 177 aa1.26□□□□□ -2.21
RTF1-207ENST00000561076 ARPINQ7Z6K5 226 aa1.26□□□□□ -2.21
RTF1-207ENST00000561076 CLECL1Q8IZS7 167 aa1.26□□□□□ -2.21
RTF1-207ENST00000561076 LINC00311Q8N616 119 aa1.26□□□□□ -2.21
RTF1-207ENST00000561076 C3orf56Q8N813 242 aa1.26□□□□□ -2.21
RTF1-207ENST00000561076 Q8NDZ9 215 aa1.26□□□□□ -2.21
RTF1-207ENST00000561076 SFT2D1Q8WV19 159 aa1.26□□□□□ -2.21
RTF1-207ENST00000561076 DPH3Q96FX2 82 aa1.26□□□□□ -2.21
RTF1-207ENST00000561076 AQP10Q96PS8 301 aa1.26□□□□□ -2.21
RTF1-207ENST00000561076 SDF2Q99470 211 aa1.26□□□□□ -2.21
RTF1-207ENST00000561076 NABP2Q9BQ15 211 aa1.26□□□□□ -2.21
RTF1-207ENST00000561076 AGPAT4-IT1Q9H0P7 198 aa1.26□□□□□ -2.21
RTF1-207ENST00000561076 RPRMQ9NS64 109 aa1.26□□□□□ -2.21
RTF1-207ENST00000561076 LSM2Q9Y333 95 aaKnown RBP1.26□□□□□ -2.21
RTF1-207ENST00000561076 DNAJC15Q9Y5T4 150 aa1.26□□□□□ -2.21
RTF1-207ENST00000561076 R4GN34 69 aa1.26□□□□□ -2.21
RTF1-207ENST00000561076 V9GYS6 101 aa1.26□□□□□ -2.21
RTF1-207ENST00000561076 AGRNO00468 2067 aa1.26□□□□□ -2.21
RTF1-207ENST00000561076 DOCK4Q8N1I0 1966 aa1.26□□□□□ -2.21
RTF1-207ENST00000561076 ZNF106Q9H2Y7 1883 aaKnown RBP1.26□□□□□ -2.21
RTF1-207ENST00000561076 SIPA1L1O43166 1804 aa1.26□□□□□ -2.21
RTF1-207ENST00000561076 KIAA1671Q9BY89 1806 aa1.26□□□□□ -2.21
RTF1-207ENST00000561076 COL18A1P39060 1754 aa1.26□□□□□ -2.21
RTF1-207ENST00000561076 NUP188Q5SRE5 1749 aa1.26□□□□□ -2.21
RTF1-207ENST00000561076 NALCNQ8IZF0 1738 aa1.26□□□□□ -2.21
RTF1-207ENST00000561076 WDR90Q96KV7 1748 aa1.26□□□□□ -2.21
RTF1-207ENST00000561076 LAMC1P11047 1609 aa1.26□□□□□ -2.21
RTF1-207ENST00000561076 ARID1BQ8NFD5 2236 aaPredicted RBP1.25□□□□□ -2.21
RTF1-207ENST00000561076 ARHGEF5Q12774 1597 aa1.25□□□□□ -2.21
RTF1-207ENST00000561076 KCPQ6ZWJ8 1503 aa1.25□□□□□ -2.21
RTF1-207ENST00000561076 PXDNLA1KZ92 1463 aa1.25□□□□□ -2.21
RTF1-207ENST00000561076 ATP7BP35670 1465 aa1.25□□□□□ -2.21
RTF1-207ENST00000561076 NRXN1Q9ULB1 1477 aa1.25□□□□□ -2.21
RTF1-207ENST00000561076 DSCAMO60469 2012 aa1.25□□□□□ -2.21
RTF1-207ENST00000561076 ANKARQ7Z5J8 1434 aa1.25□□□□□ -2.21
RTF1-207ENST00000561076 ANKRD50Q9ULJ7 1429 aa1.25□□□□□ -2.21
RTF1-207ENST00000561076 TCF20Q9UGU0 1960 aaKnown RBP1.25□□□□□ -2.21
RTF1-207ENST00000561076 PCSK5Q92824 1860 aa1.25□□□□□ -2.21
RTF1-207ENST00000561076 IGLV10-54A0A075B6I4 117 aa1.25□□□□□ -2.21
RTF1-207ENST00000561076 TRAV10A0A0B4J240 114 aa1.25□□□□□ -2.21
RTF1-207ENST00000561076 TRAV17A0A0B4J275 112 aa1.25□□□□□ -2.21
RTF1-207ENST00000561076 LOC100130705A0A1B0GUX0 176 aa1.25□□□□□ -2.21
RTF1-207ENST00000561076 COLCA2A8K830 154 aa1.25□□□□□ -2.21
RTF1-207ENST00000561076 CCDC179H3BU77 68 aa1.25□□□□□ -2.21
RTF1-207ENST00000561076 NDUFB6O95139 128 aa1.25□□□□□ -2.21
RTF1-207ENST00000561076 IGLV6-57P01721 117 aa1.25□□□□□ -2.21
RTF1-207ENST00000561076 SPINK8P0C7L1 97 aa1.25□□□□□ -2.21
RTF1-207ENST00000561076 BRS3P32247 399 aa1.25□□□□□ -2.21
RTF1-207ENST00000561076 SSR2P43308 183 aa1.25□□□□□ -2.21
RTF1-207ENST00000561076 POLR2JP52435 117 aaKnown RBP1.25□□□□□ -2.21
RTF1-207ENST00000561076 DSCR4P56555 118 aaPredicted RBP1.25□□□□□ -2.21
RTF1-207ENST00000561076 NPC2P61916 151 aa1.25□□□□□ -2.21
RTF1-207ENST00000561076 EIF4EBP1Q13541 118 aaPredicted RBP1.25□□□□□ -2.21
RTF1-207ENST00000561076 NCMAPQ5T1S8 102 aa1.25□□□□□ -2.21
RTF1-207ENST00000561076 SPANXN1Q5VSR9 72 aa1.25□□□□□ -2.21
RTF1-207ENST00000561076 MIC13Q5XKP0 118 aa1.25□□□□□ -2.21
RTF1-207ENST00000561076 Q6P435 159 aa1.25□□□□□ -2.21
RTF1-207ENST00000561076 SH2D6Q7Z4S9 175 aa1.25□□□□□ -2.21
RTF1-207ENST00000561076 VSTM2AQ8TAG5 236 aa1.25□□□□□ -2.21
RTF1-207ENST00000561076 TMEM242Q9NWH2 141 aa1.25□□□□□ -2.21
RTF1-207ENST00000561076 ANAPC11Q9NYG5 84 aa1.25□□□□□ -2.21
RTF1-207ENST00000561076 PSORS1C2Q9UIG4 136 aa1.25□□□□□ -2.21
RTF1-207ENST00000561076 CHCHD2Q9Y6H1 151 aaPredicted RBP1.25□□□□□ -2.21
RTF1-207ENST00000561076 COL14A1Q05707 1796 aaKnown RBP1.25□□□□□ -2.21
RTF1-207ENST00000561076 ADAMTSL1Q8N6G6 1762 aa1.25□□□□□ -2.21
RTF1-207ENST00000561076 CABIN1Q9Y6J0 2220 aa1.25□□□□□ -2.21
RTF1-207ENST00000561076 TNS1Q9HBL0 1735 aaKnown RBP1.25□□□□□ -2.21
RTF1-207ENST00000561076 MARF1Q9Y4F3 1742 aaKnown RBP1.25□□□□□ -2.21
RTF1-207ENST00000561076 RREB1Q92766 1687 aa1.25□□□□□ -2.21
RTF1-207ENST00000561076 UTRNP46939 3433 aa1.25□□□□□ -2.21
RTF1-207ENST00000561076 CDC42BPGQ6DT37 1551 aa1.25□□□□□ -2.21
RTF1-207ENST00000561076 MYH11P35749 1972 aa1.25□□□□□ -2.21
RTF1-207ENST00000561076 ARHGAP21Q5T5U3 1957 aa1.25□□□□□ -2.21
RTF1-207ENST00000561076 PLXND1Q9Y4D7 1925 aa1.25□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms