RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 COL6A6A6NMZ7 2263 aa10.89□□□□□ -0.67
RABGGTA-220ENST00000560998 M0R1W7 72 aa10.89□□□□□ -0.67
RABGGTA-220ENST00000560998 TIMM23O14925 209 aa10.89□□□□□ -0.67
RABGGTA-220ENST00000560998 CFAP126Q5VTH2 177 aa10.89□□□□□ -0.67
RABGGTA-220ENST00000560998 LYZL1Q6UWQ5 148 aa10.89□□□□□ -0.67
RABGGTA-220ENST00000560998 PRORYQ9H606 182 aa10.89□□□□□ -0.67
RABGGTA-220ENST00000560998 ARHGAP32A7KAX9 2087 aa10.89□□□□□ -0.67
RABGGTA-220ENST00000560998 NPYP01303 97 aa10.88□□□□□ -0.67
RABGGTA-220ENST00000560998 GAGE5Q13069 117 aa10.88□□□□□ -0.67
RABGGTA-220ENST00000560998 GAGE6Q13070 117 aa10.88□□□□□ -0.67
RABGGTA-220ENST00000560998 TMEM158Q8WZ71 300 aa10.88□□□□□ -0.67
RABGGTA-220ENST00000560998 TPPP3Q9BW30 176 aa10.88□□□□□ -0.67
RABGGTA-220ENST00000560998 DPM3Q9P2X0 92 aa10.88□□□□□ -0.67
RABGGTA-220ENST00000560998 AMTNQ6UX39 209 aa10.88□□□□□ -0.67
RABGGTA-220ENST00000560998 DLX4Q92988 240 aaPredicted RBP10.88□□□□□ -0.67
RABGGTA-220ENST00000560998 RELNP78509 3460 aa10.88□□□□□ -0.67
RABGGTA-220ENST00000560998 A0A1W2PPR1 153 aa10.87□□□□□ -0.67
RABGGTA-220ENST00000560998 TMEM213A2RRL7 107 aa10.87□□□□□ -0.67
RABGGTA-220ENST00000560998 ODF3BA8MYP8 253 aa10.87□□□□□ -0.67
RABGGTA-220ENST00000560998 H3BTX0 84 aa10.87□□□□□ -0.67
RABGGTA-220ENST00000560998 PRSS1P07477 247 aa10.87□□□□□ -0.67
RABGGTA-220ENST00000560998 PRTN3P24158 256 aa10.87□□□□□ -0.67
RABGGTA-220ENST00000560998 PLGLAQ15195 96 aa10.87□□□□□ -0.67
RABGGTA-220ENST00000560998 ZC2HC1BQ5TFG8 222 aa10.87□□□□□ -0.67
RABGGTA-220ENST00000560998 LYRM7Q5U5X0 104 aa10.87□□□□□ -0.67
RABGGTA-220ENST00000560998 EXOC3-AS1Q8N2X6 119 aa10.87□□□□□ -0.67
RABGGTA-220ENST00000560998 CFHR4Q92496 578 aa10.87□□□□□ -0.67
RABGGTA-220ENST00000560998 RNF183Q96D59 192 aa10.87□□□□□ -0.67
RABGGTA-220ENST00000560998 CHD8Q9HCK8 2581 aa10.87□□□□□ -0.67
RABGGTA-220ENST00000560998 TRBV7-3A0A075B6L6 115 aa10.86□□□□□ -0.67
RABGGTA-220ENST00000560998 IGHV3-21A0A0B4J1V1 117 aa10.86□□□□□ -0.67
RABGGTA-220ENST00000560998 TACC2O95359 2948 aa10.86□□□□□ -0.67
RABGGTA-220ENST00000560998 MT-ATP8P03928 68 aa10.86□□□□□ -0.67
RABGGTA-220ENST00000560998 CRIP1P50238 77 aa10.86□□□□□ -0.67
RABGGTA-220ENST00000560998 COX8CQ7Z4L0 72 aa10.86□□□□□ -0.67
RABGGTA-220ENST00000560998 GTSCR1Q86UQ5 136 aa10.86□□□□□ -0.67
RABGGTA-220ENST00000560998 PPDPFLQ8WWR9 84 aa10.86□□□□□ -0.67
RABGGTA-220ENST00000560998 HIST1H4GQ99525 98 aa10.86□□□□□ -0.67
RABGGTA-220ENST00000560998 SRSF8Q9BRL6 282 aaKnown RBP10.86□□□□□ -0.67
RABGGTA-220ENST00000560998 ANAPC13Q9BS18 74 aa10.86□□□□□ -0.67
RABGGTA-220ENST00000560998 HIVEP3Q5T1R4 2406 aa10.86□□□□□ -0.67
RABGGTA-220ENST00000560998 TRBV19A0A075B6N1 114 aa10.86□□□□□ -0.67
RABGGTA-220ENST00000560998 LEPP41159 167 aa10.86□□□□□ -0.67
RABGGTA-220ENST00000560998 FXYD7P58549 80 aa10.86□□□□□ -0.67
RABGGTA-220ENST00000560998 TTTY13Q9BZ97 58 aa10.86□□□□□ -0.67
RABGGTA-220ENST00000560998 NCOR2Q9Y618 2525 aa10.86□□□□□ -0.67
RABGGTA-220ENST00000560998 XGP55808 180 aa10.85□□□□□ -0.67
RABGGTA-220ENST00000560998 FOXC2Q99958 501 aa10.85□□□□□ -0.67
RABGGTA-220ENST00000560998 TMEM8BA6NDV4 472 aa10.85□□□□□ -0.67
RABGGTA-220ENST00000560998 NCBP2LA6PVI3 153 aaKnown RBP10.85□□□□□ -0.67
RABGGTA-220ENST00000560998 I3L2K1 104 aa10.85□□□□□ -0.67
RABGGTA-220ENST00000560998 NBR2O15453 112 aa10.85□□□□□ -0.67
RABGGTA-220ENST00000560998 C1orf122Q6ZSJ8 110 aa10.85□□□□□ -0.67
RABGGTA-220ENST00000560998 NPBQ8NG41 125 aa10.85□□□□□ -0.67
RABGGTA-220ENST00000560998 IGFBPL1Q8WX77 278 aa10.85□□□□□ -0.67
RABGGTA-220ENST00000560998 TMEM262E9PQX1 116 aa10.84□□□□□ -0.67
RABGGTA-220ENST00000560998 NDUFA3O95167 84 aa10.84□□□□□ -0.67
RABGGTA-220ENST00000560998 CNIH1O95406 144 aa10.84□□□□□ -0.67
RABGGTA-220ENST00000560998 IL4P05112 153 aa10.84□□□□□ -0.67
RABGGTA-220ENST00000560998 PLNP26678 52 aa10.84□□□□□ -0.67
RABGGTA-220ENST00000560998 SIGLEC15Q6ZMC9 328 aa10.84□□□□□ -0.67
RABGGTA-220ENST00000560998 SPANXA1Q9NS26 97 aa10.84□□□□□ -0.67
RABGGTA-220ENST00000560998 ITPR1Q14643 2758 aa10.84□□□□□ -0.67
RABGGTA-220ENST00000560998 SPTBN1Q01082 2364 aaKnown RBP10.84□□□□□ -0.67
RABGGTA-220ENST00000560998 HOXA3O43365 443 aaPredicted RBP10.83□□□□□ -0.68
RABGGTA-220ENST00000560998 LYZP61626 148 aa10.83□□□□□ -0.68
RABGGTA-220ENST00000560998 SRSF2Q01130 221 aaKnown RBP10.83□□□□□ -0.68
RABGGTA-220ENST00000560998 ZFAND6Q6FIF0 208 aa10.83□□□□□ -0.68
RABGGTA-220ENST00000560998 Q71RC1 249 aaPredicted RBP10.83□□□□□ -0.68
RABGGTA-220ENST00000560998 WFDC3Q8IUB2 231 aa10.83□□□□□ -0.68
RABGGTA-220ENST00000560998 SS18L2Q9UHA2 77 aa10.83□□□□□ -0.68
RABGGTA-220ENST00000560998 SH2D1AO60880 128 aa10.83□□□□□ -0.68
RABGGTA-220ENST00000560998 ZFP36P26651 326 aaKnown RBP10.83□□□□□ -0.68
RABGGTA-220ENST00000560998 SMCPP49901 116 aaPredicted RBP10.83□□□□□ -0.68
RABGGTA-220ENST00000560998 MORN3Q6PF18 240 aaPredicted RBP10.83□□□□□ -0.68
RABGGTA-220ENST00000560998 VMO1Q7Z5L0 202 aa10.83□□□□□ -0.68
RABGGTA-220ENST00000560998 TEN1Q86WV5 123 aa10.83□□□□□ -0.68
RABGGTA-220ENST00000560998 ITLN2Q8WWU7 325 aaPredicted RBP10.83□□□□□ -0.68
RABGGTA-220ENST00000560998 FAM110AQ9BQ89 295 aa10.83□□□□□ -0.68
RABGGTA-220ENST00000560998 NFE4Q86UQ8 179 aa10.82□□□□□ -0.68
RABGGTA-220ENST00000560998 MAPKAPK5-AS1Q8N8E1 139 aa10.82□□□□□ -0.68
RABGGTA-220ENST00000560998 SHANK2-AS3Q9BTD1 123 aa10.82□□□□□ -0.68
RABGGTA-220ENST00000560998 UBTD1Q9HAC8 227 aa10.82□□□□□ -0.68
RABGGTA-220ENST00000560998 SMKR1H3BMG3 65 aa10.81□□□□□ -0.68
RABGGTA-220ENST00000560998 K7EIM0 57 aa10.81□□□□□ -0.68
RABGGTA-220ENST00000560998 PDE6HQ13956 83 aa10.81□□□□□ -0.68
RABGGTA-220ENST00000560998 CNFNQ9BYD5 112 aa10.81□□□□□ -0.68
RABGGTA-220ENST00000560998 A0A087WX48 190 aa10.81□□□□□ -0.68
RABGGTA-220ENST00000560998 H3BRN7 92 aa10.81□□□□□ -0.68
RABGGTA-220ENST00000560998 IGLC6P0CF74 106 aa10.81□□□□□ -0.68
RABGGTA-220ENST00000560998 FHL3Q13643 280 aa10.81□□□□□ -0.68
RABGGTA-220ENST00000560998 HES1Q14469 280 aa10.81□□□□□ -0.68
RABGGTA-220ENST00000560998 DYNAPQ8N1N2 210 aa10.81□□□□□ -0.68
RABGGTA-220ENST00000560998 TEX29Q8N6K0 151 aa10.81□□□□□ -0.68
RABGGTA-220ENST00000560998 Q8N8P6 123 aa10.81□□□□□ -0.68
RABGGTA-220ENST00000560998 RNF185Q96GF1 192 aa10.81□□□□□ -0.68
RABGGTA-220ENST00000560998 MYMXA0A1B0GTQ4 84 aa10.8□□□□□ -0.68
RABGGTA-220ENST00000560998 OOSP1A8MZH6 123 aa10.8□□□□□ -0.68
RABGGTA-220ENST00000560998 IGKV1-17P01599 117 aa10.8□□□□□ -0.68
RABGGTA-220ENST00000560998 GATA3P23771 443 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms