RNA–Protein interactions for RNA: ENST00000560542.1

IRF9-210, Transcript of interferon regulatory factor 9, humanhuman

TSL 2

Gene IRF9, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-210ENST00000560542 HIST1H1EP10412 219 aaKnown RBP9.45□□□□□ -0.9
IRF9-210ENST00000560542 ERCC8Q13216 396 aa9.45□□□□□ -0.9
IRF9-210ENST00000560542 LAGE3Q14657 143 aa9.45□□□□□ -0.9
IRF9-210ENST00000560542 MZT2BQ6NZ67 158 aa9.45□□□□□ -0.9
IRF9-210ENST00000560542 OR1L4Q8NGR5 311 aa9.45□□□□□ -0.9
IRF9-210ENST00000560542 ZNF479Q96JC4 524 aa9.45□□□□□ -0.9
IRF9-210ENST00000560542 PFDN5Q99471 154 aa9.45□□□□□ -0.9
IRF9-210ENST00000560542 MGST2Q99735 147 aa9.45□□□□□ -0.9
IRF9-210ENST00000560542 SLC25A31Q9H0C2 315 aa9.45□□□□□ -0.9
IRF9-210ENST00000560542 TRAV6A0A075B6T7 132 aa9.44□□□□□ -0.9
IRF9-210ENST00000560542 FAM240BA0A1B0GVZ2 78 aa9.44□□□□□ -0.9
IRF9-210ENST00000560542 KRTAP10-4P60372 401 aaPredicted RBP9.44□□□□□ -0.9
IRF9-210ENST00000560542 RAB31Q13636 194 aa9.44□□□□□ -0.9
IRF9-210ENST00000560542 TMEM78Q5T7P6 136 aa9.44□□□□□ -0.9
IRF9-210ENST00000560542 C12orf45Q8N5I9 185 aaPredicted RBP9.44□□□□□ -0.9
IRF9-210ENST00000560542 BLNKQ8WV28 456 aa9.44□□□□□ -0.9
IRF9-210ENST00000560542 SPXQ9BT56 116 aa9.44□□□□□ -0.9
IRF9-210ENST00000560542 NUDT15Q9NV35 164 aa9.44□□□□□ -0.9
IRF9-210ENST00000560542 TMEM14CQ9P0S9 112 aa9.44□□□□□ -0.9
IRF9-210ENST00000560542 TRAV8-6A0A0B4J262 113 aa9.43□□□□□ -0.9
IRF9-210ENST00000560542 SFTA3P0C7M3 94 aa9.43□□□□□ -0.9
IRF9-210ENST00000560542 CAMLGP49069 296 aa9.43□□□□□ -0.9
IRF9-210ENST00000560542 PPT1P50897 306 aa9.43□□□□□ -0.9
IRF9-210ENST00000560542 SCXQ7RTU7 201 aa9.43□□□□□ -0.9
IRF9-210ENST00000560542 Q9HAA7 133 aa9.43□□□□□ -0.9
IRF9-210ENST00000560542 TRAV4A0A0B4J268 109 aa9.42□□□□□ -0.9
IRF9-210ENST00000560542 H2AFB2P0C5Z0 115 aa9.42□□□□□ -0.9
IRF9-210ENST00000560542 PRR9Q5T870 116 aa9.42□□□□□ -0.9
IRF9-210ENST00000560542 AAMDCQ9H7C9 122 aa9.42□□□□□ -0.9
IRF9-210ENST00000560542 ZNF492Q9P255 531 aa9.42□□□□□ -0.9
IRF9-210ENST00000560542 LRP1Q07954 4544 aaKnown RBP9.41□□□□□ -0.9
IRF9-210ENST00000560542 NDUFB4O95168 129 aa9.41□□□□□ -0.9
IRF9-210ENST00000560542 ACOT6Q3I5F7 207 aaPredicted RBP9.41□□□□□ -0.9
IRF9-210ENST00000560542 NHLRC2Q8NBF2 726 aa9.41□□□□□ -0.9
IRF9-210ENST00000560542 ENKURQ8TC29 256 aa9.41□□□□□ -0.9
IRF9-210ENST00000560542 CHAC1Q9BUX1 264 aa9.41□□□□□ -0.9
IRF9-210ENST00000560542 TIMM9Q9Y5J7 89 aa9.41□□□□□ -0.9
IRF9-210ENST00000560542 TRGV11A0A075B6L2 103 aa9.4□□□□□ -0.9
IRF9-210ENST00000560542 RS1O15537 224 aa9.4□□□□□ -0.9
IRF9-210ENST00000560542 PFN1P07737 140 aaKnown RBP9.4□□□□□ -0.9
IRF9-210ENST00000560542 DEFA1P59665 94 aa9.4□□□□□ -0.9
IRF9-210ENST00000560542 DEFA3P59666 94 aa9.4□□□□□ -0.9
IRF9-210ENST00000560542 ARL16Q0P5N6 197 aa9.4□□□□□ -0.9
IRF9-210ENST00000560542 MITD1Q8WV92 249 aa9.4□□□□□ -0.9
IRF9-210ENST00000560542 SEC22CQ9BRL7 303 aa9.4□□□□□ -0.9
IRF9-210ENST00000560542 ZNF138P52744 262 aa9.39□□□□□ -0.91
IRF9-210ENST00000560542 ZNF266Q14584 549 aa9.39□□□□□ -0.91
IRF9-210ENST00000560542 OR10J3Q5JRS4 329 aa9.39□□□□□ -0.91
IRF9-210ENST00000560542 MIC13Q5XKP0 118 aa9.39□□□□□ -0.91
IRF9-210ENST00000560542 NRARPQ7Z6K4 114 aa9.39□□□□□ -0.91
IRF9-210ENST00000560542 OR4C5Q8NGB2 326 aa9.39□□□□□ -0.91
IRF9-210ENST00000560542 IGKV2-40A0A087WW87 121 aaPredicted RBP9.38□□□□□ -0.91
IRF9-210ENST00000560542 TRAV8-3A0A0A6YYJ7 113 aa9.38□□□□□ -0.91
IRF9-210ENST00000560542 SCGB1D2O95969 90 aa9.38□□□□□ -0.91
IRF9-210ENST00000560542 IGKV2D-40P01614 121 aaPredicted RBP9.38□□□□□ -0.91
IRF9-210ENST00000560542 RPL29P47914 159 aaKnown RBP9.38□□□□□ -0.91
IRF9-210ENST00000560542 WFDC2Q14508 124 aa9.38□□□□□ -0.91
IRF9-210ENST00000560542 LELP1Q5T871 98 aa9.38□□□□□ -0.91
IRF9-210ENST00000560542 Q6ZQT7 251 aa9.38□□□□□ -0.91
IRF9-210ENST00000560542 EXOC3-AS1Q8N2X6 119 aa9.38□□□□□ -0.91
IRF9-210ENST00000560542 SLC39A9Q9NUM3 307 aa9.38□□□□□ -0.91
IRF9-210ENST00000560542 DNAH8Q96JB1 4490 aa9.38□□□□□ -0.91
IRF9-210ENST00000560542 LOC100131303A0A0U1RQF7 123 aa9.37□□□□□ -0.91
IRF9-210ENST00000560542 C7orf66A4D0T2 115 aa9.37□□□□□ -0.91
IRF9-210ENST00000560542 IGLV2-8P01709 118 aa9.37□□□□□ -0.91
IRF9-210ENST00000560542 GATA1P15976 413 aaPredicted RBP9.37□□□□□ -0.91
IRF9-210ENST00000560542 IAH1Q2TAA2 248 aaPredicted RBP9.37□□□□□ -0.91
IRF9-210ENST00000560542 Q6AWC8 147 aa9.37□□□□□ -0.91
IRF9-210ENST00000560542 FAM159AQ6UWV7 190 aa9.37□□□□□ -0.91
IRF9-210ENST00000560542 CHAC2Q8WUX2 184 aa9.37□□□□□ -0.91
IRF9-210ENST00000560542 WDR83OSQ9Y284 106 aa9.37□□□□□ -0.91
IRF9-210ENST00000560542 COX11Q9Y6N1 276 aa9.37□□□□□ -0.91
IRF9-210ENST00000560542 RBAKDNA6NC62 111 aa9.36□□□□□ -0.91
IRF9-210ENST00000560542 M0R2P5 195 aa9.36□□□□□ -0.91
IRF9-210ENST00000560542 CCSO14618 274 aa9.36□□□□□ -0.91
IRF9-210ENST00000560542 CIDEAO60543 219 aa9.36□□□□□ -0.91
IRF9-210ENST00000560542 IGHV3-30P01768 117 aa9.36□□□□□ -0.91
IRF9-210ENST00000560542 IGHV3-33P01772 117 aa9.36□□□□□ -0.91
IRF9-210ENST00000560542 IGHV3-30-3P0DP02 117 aa9.36□□□□□ -0.91
IRF9-210ENST00000560542 IGHV3-30-5P0DP03 117 aa9.36□□□□□ -0.91
IRF9-210ENST00000560542 VWC2Q2TAL6 325 aa9.36□□□□□ -0.91
IRF9-210ENST00000560542 TOR2AQ5JU69 321 aa9.36□□□□□ -0.91
IRF9-210ENST00000560542 MUC21Q5SSG8 566 aa9.36□□□□□ -0.91
IRF9-210ENST00000560542 SH3BGRL3Q9H299 93 aa9.36□□□□□ -0.91
IRF9-210ENST00000560542 UQCC1Q9NVA1 299 aa9.36□□□□□ -0.91
IRF9-210ENST00000560542 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.35□□□□□ -0.91
IRF9-210ENST00000560542 INMT-MINDY4F8WBC2 141 aa9.35□□□□□ -0.91
IRF9-210ENST00000560542 PYYP10082 97 aa9.35□□□□□ -0.91
IRF9-210ENST00000560542 TMEM183BQ1AE95 376 aa9.35□□□□□ -0.91
IRF9-210ENST00000560542 FAM122CQ6P4D5 195 aa9.35□□□□□ -0.91
IRF9-210ENST00000560542 TMEM183AQ8IXX5 376 aa9.35□□□□□ -0.91
IRF9-210ENST00000560542 CIRBP-AS1Q8TBR5 109 aa9.35□□□□□ -0.91
IRF9-210ENST00000560542 PRADC1Q9BSG0 188 aa9.35□□□□□ -0.91
IRF9-210ENST00000560542 GPN1Q9HCN4 374 aaPredicted RBP9.35□□□□□ -0.91
IRF9-210ENST00000560542 LENEPQ9Y5L5 61 aa9.35□□□□□ -0.91
IRF9-210ENST00000560542 L7N2F9 121 aa9.34□□□□□ -0.91
IRF9-210ENST00000560542 IGLV2-11P01706 119 aa9.34□□□□□ -0.91
IRF9-210ENST00000560542 MBPP02686 304 aaPredicted RBP9.34□□□□□ -0.91
IRF9-210ENST00000560542 VAMP2P63027 116 aa9.34□□□□□ -0.91
IRF9-210ENST00000560542 RHOHQ15669 191 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 170.6 ms