RNA–Protein interactions for RNA: ENST00000559873.5

USP3-216, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5

Gene USP3, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-216ENST00000559873 C1orf158Q8N1D5 194 aa7.31□□□□□ -1.24
USP3-216ENST00000559873 ZFAND2AQ8N6M9 145 aa7.31□□□□□ -1.24
USP3-216ENST00000559873 C11orf52Q96A22 123 aa7.31□□□□□ -1.24
USP3-216ENST00000559873 ZFP30Q9Y2G7 519 aa7.31□□□□□ -1.24
USP3-216ENST00000559873 TENM3Q9P273 2699 aa7.31□□□□□ -1.24
USP3-216ENST00000559873 TGP01266 2768 aa7.3□□□□□ -1.24
USP3-216ENST00000559873 NBEAL2Q6ZNJ1 2754 aa7.3□□□□□ -1.24
USP3-216ENST00000559873 TRAV21A0A0B4J279 112 aa7.3□□□□□ -1.24
USP3-216ENST00000559873 IGHV4-28A0A0C4DH34 117 aa7.3□□□□□ -1.24
USP3-216ENST00000559873 SCO2A0A1W2PP80 73 aa7.3□□□□□ -1.24
USP3-216ENST00000559873 RBFOX3A6NFN3 312 aa7.3□□□□□ -1.24
USP3-216ENST00000559873 RGS13O14921 159 aa7.3□□□□□ -1.24
USP3-216ENST00000559873 TMEM183BQ1AE95 376 aa7.3□□□□□ -1.24
USP3-216ENST00000559873 Q6AWC8 147 aa7.3□□□□□ -1.24
USP3-216ENST00000559873 ZNF493Q6ZR52 646 aa7.3□□□□□ -1.24
USP3-216ENST00000559873 Q8NAQ8 132 aa7.3□□□□□ -1.24
USP3-216ENST00000559873 IL17DQ8TAD2 202 aa7.3□□□□□ -1.24
USP3-216ENST00000559873 C16orf74Q96GX8 76 aa7.3□□□□□ -1.24
USP3-216ENST00000559873 SGK494Q96LW2 274 aa7.3□□□□□ -1.24
USP3-216ENST00000559873 EIF5A2Q9GZV4 153 aaKnown RBP7.3□□□□□ -1.24
USP3-216ENST00000559873 MED9Q9NWA0 146 aa7.3□□□□□ -1.24
USP3-216ENST00000559873 KLF12Q9Y4X4 402 aa7.3□□□□□ -1.24
USP3-216ENST00000559873 X6R8D5 127 aa7.3□□□□□ -1.24
USP3-216ENST00000559873 TRAV34A0A0B4J273 112 aa7.29□□□□□ -1.24
USP3-216ENST00000559873 A0A0J9YWU9 116 aa7.29□□□□□ -1.24
USP3-216ENST00000559873 TMEM250H0YL14 139 aa7.29□□□□□ -1.24
USP3-216ENST00000559873 NDUFS6O75380 124 aaKnown RBP7.29□□□□□ -1.24
USP3-216ENST00000559873 IGLV2-11P01706 119 aa7.29□□□□□ -1.24
USP3-216ENST00000559873 RBMY1A1P0DJD3 496 aaKnown RBP7.29□□□□□ -1.24
USP3-216ENST00000559873 RBMY1CP0DJD4 496 aa7.29□□□□□ -1.24
USP3-216ENST00000559873 KIR3DS1Q14943 382 aa7.29□□□□□ -1.24
USP3-216ENST00000559873 RBMY1FQ15415 496 aaKnown RBP7.29□□□□□ -1.24
USP3-216ENST00000559873 TOR2AQ5JU69 321 aa7.29□□□□□ -1.24
USP3-216ENST00000559873 ZNF506Q5JVG8 444 aa7.29□□□□□ -1.24
USP3-216ENST00000559873 FAM159AQ6UWV7 190 aa7.29□□□□□ -1.24
USP3-216ENST00000559873 EIF4E3Q8N5X7 224 aaKnown RBP7.29□□□□□ -1.24
USP3-216ENST00000559873 C2CD4CQ8TF44 421 aa7.29□□□□□ -1.24
USP3-216ENST00000559873 TMEM263Q8WUH6 116 aaKnown RBP7.29□□□□□ -1.24
USP3-216ENST00000559873 FAM210AQ96ND0 272 aa7.29□□□□□ -1.24
USP3-216ENST00000559873 WWC2-AS2Q96NR7 200 aa7.29□□□□□ -1.24
USP3-216ENST00000559873 LINC00467Q9BRT7 94 aa7.29□□□□□ -1.24
USP3-216ENST00000559873 EDA2RQ9HAV5 297 aa7.29□□□□□ -1.24
USP3-216ENST00000559873 IGHV1OR15-1A0A075B7D0 117 aa7.28□□□□□ -1.24
USP3-216ENST00000559873 CBY3A6NI87 242 aa7.28□□□□□ -1.24
USP3-216ENST00000559873 GCGP01275 180 aa7.28□□□□□ -1.24
USP3-216ENST00000559873 LTAP01374 205 aa7.28□□□□□ -1.24
USP3-216ENST00000559873 PFN1P07737 140 aaKnown RBP7.28□□□□□ -1.24
USP3-216ENST00000559873 HTN1P15515 57 aa7.28□□□□□ -1.24
USP3-216ENST00000559873 RPL35P42766 123 aaKnown RBP7.28□□□□□ -1.24
USP3-216ENST00000559873 PRR9Q5T870 116 aa7.28□□□□□ -1.24
USP3-216ENST00000559873 SMIM12Q96EX1 92 aa7.28□□□□□ -1.24
USP3-216ENST00000559873 KCNS1Q96KK3 526 aa7.28□□□□□ -1.24
USP3-216ENST00000559873 LINC00479Q96M42 142 aa7.28□□□□□ -1.24
USP3-216ENST00000559873 TRGV11A0A075B6L2 103 aa7.27□□□□□ -1.25
USP3-216ENST00000559873 ZNF705GA8MUZ8 300 aaPredicted RBP7.27□□□□□ -1.25
USP3-216ENST00000559873 SNURFLB1AK76 121 aa7.27□□□□□ -1.25
USP3-216ENST00000559873 ZNF324O75467 553 aaPredicted RBP7.27□□□□□ -1.25
USP3-216ENST00000559873 GNG4P50150 75 aa7.27□□□□□ -1.25
USP3-216ENST00000559873 EMP1P54849 157 aa7.27□□□□□ -1.25
USP3-216ENST00000559873 ANXA2RQ3ZCQ2 193 aa7.27□□□□□ -1.25
USP3-216ENST00000559873 BAGE2Q86Y30 109 aa7.27□□□□□ -1.25
USP3-216ENST00000559873 TMEM183AQ8IXX5 376 aa7.27□□□□□ -1.25
USP3-216ENST00000559873 PCNPQ8WW12 178 aaKnown RBP7.27□□□□□ -1.25
USP3-216ENST00000559873 TVP23CQ96ET8 276 aa7.27□□□□□ -1.25
USP3-216ENST00000559873 C8orf49Q96NF6 230 aa7.27□□□□□ -1.25
USP3-216ENST00000559873 SMDT1Q9H4I9 107 aa7.27□□□□□ -1.25
USP3-216ENST00000559873 NAGKQ9UJ70 344 aa7.27□□□□□ -1.25
USP3-216ENST00000559873 SPART-AS1P0CW21 52 aa7.26□□□□□ -1.25
USP3-216ENST00000559873 ZNF415Q09FC8 603 aa7.26□□□□□ -1.25
USP3-216ENST00000559873 PEA15Q15121 130 aa7.26□□□□□ -1.25
USP3-216ENST00000559873 CENPWQ5EE01 88 aa7.26□□□□□ -1.25
USP3-216ENST00000559873 IBA57Q5T440 356 aaKnown RBP7.26□□□□□ -1.25
USP3-216ENST00000559873 FAM162BQ5T6X4 162 aa7.26□□□□□ -1.25
USP3-216ENST00000559873 COX8CQ7Z4L0 72 aa7.26□□□□□ -1.25
USP3-216ENST00000559873 C11orf45Q8TAV5 145 aa7.26□□□□□ -1.25
USP3-216ENST00000559873 RNASE8Q8TDE3 154 aaKnown RBP7.26□□□□□ -1.25
USP3-216ENST00000559873 SDF2L1Q9HCN8 221 aa7.26□□□□□ -1.25
USP3-216ENST00000559873 BIN3Q9NQY0 253 aa7.26□□□□□ -1.25
USP3-216ENST00000559873 CXorf65A6NEN9 183 aa7.25□□□□□ -1.25
USP3-216ENST00000559873 LYRM9A8MSI8 78 aa7.25□□□□□ -1.25
USP3-216ENST00000559873 FABP5P3A8MUU1 101 aa7.25□□□□□ -1.25
USP3-216ENST00000559873 C9JCJ5 164 aa7.25□□□□□ -1.25
USP3-216ENST00000559873 DEFB4AO15263 64 aa7.25□□□□□ -1.25
USP3-216ENST00000559873 TDRG1Q3Y452 100 aa7.25□□□□□ -1.25
USP3-216ENST00000559873 CLLU1Q5K131 121 aa7.25□□□□□ -1.25
USP3-216ENST00000559873 MUC21Q5SSG8 566 aa7.25□□□□□ -1.25
USP3-216ENST00000559873 ZC2HC1AQ96GY0 325 aa7.25□□□□□ -1.25
USP3-216ENST00000559873 DERL1Q9BUN8 251 aa7.25□□□□□ -1.25
USP3-216ENST00000559873 TIMM8BQ9Y5J9 83 aaPredicted RBP7.25□□□□□ -1.25
USP3-216ENST00000559873 CEBPGP53567 150 aa7.24□□□□□ -1.25
USP3-216ENST00000559873 ZNF674Q2M3X9 581 aa7.24□□□□□ -1.25
USP3-216ENST00000559873 FAM222AQ5U5X8 452 aa7.24□□□□□ -1.25
USP3-216ENST00000559873 NHLRC2Q8NBF2 726 aa7.24□□□□□ -1.25
USP3-216ENST00000559873 PARLQ9H300 379 aa7.24□□□□□ -1.25
USP3-216ENST00000559873 COL7A1Q02388 2944 aa7.23□□□□□ -1.25
USP3-216ENST00000559873 MGST1P10620 155 aaKnown RBP7.23□□□□□ -1.25
USP3-216ENST00000559873 AZU1P20160 251 aa7.23□□□□□ -1.25
USP3-216ENST00000559873 ZNF80P51504 273 aaPredicted RBP7.23□□□□□ -1.25
USP3-216ENST00000559873 TCL1AP56279 114 aa7.23□□□□□ -1.25
USP3-216ENST00000559873 FAM74A3Q4VXF1 159 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms