RNA–Protein interactions for RNA: ENST00000557588.5

ABCD4-228, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3 BASIC

Gene ABCD4, Length 763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-228ENST00000557588 SLC39A9Q9NUM3 307 aa12.16□□□□□ -0.46
ABCD4-228ENST00000557588 WDR83OSQ9Y284 106 aa12.16□□□□□ -0.46
ABCD4-228ENST00000557588 BOLA1Q9Y3E2 137 aa12.16□□□□□ -0.46
ABCD4-228ENST00000557588 V9GYH0 126 aa12.16□□□□□ -0.46
ABCD4-228ENST00000557588 LOC100131303A0A0U1RQF7 123 aa12.15□□□□□ -0.46
ABCD4-228ENST00000557588 PYYP10082 97 aa12.15□□□□□ -0.46
ABCD4-228ENST00000557588 RPL29P47914 159 aaKnown RBP12.15□□□□□ -0.46
ABCD4-228ENST00000557588 LAGE3Q14657 143 aa12.15□□□□□ -0.46
ABCD4-228ENST00000557588 SCXQ7RTU7 201 aa12.15□□□□□ -0.46
ABCD4-228ENST00000557588 MBPP02686 304 aaPredicted RBP12.14□□□□□ -0.47
ABCD4-228ENST00000557588 ZNF138P52744 262 aa12.14□□□□□ -0.47
ABCD4-228ENST00000557588 ZNF846Q147U1 533 aa12.14□□□□□ -0.47
ABCD4-228ENST00000557588 VWC2Q2TAL6 325 aa12.14□□□□□ -0.47
ABCD4-228ENST00000557588 MUC21Q5SSG8 566 aa12.14□□□□□ -0.47
ABCD4-228ENST00000557588 Q8TAT8 98 aa12.14□□□□□ -0.47
ABCD4-228ENST00000557588 MRPS26Q9BYN8 205 aaKnown RBP12.14□□□□□ -0.47
ABCD4-228ENST00000557588 UQCC1Q9NVA1 299 aa12.14□□□□□ -0.47
ABCD4-228ENST00000557588 NDUFB6O95139 128 aa12.13□□□□□ -0.47
ABCD4-228ENST00000557588 TMBIM6P55061 237 aa12.13□□□□□ -0.47
ABCD4-228ENST00000557588 ZNF266Q14584 549 aa12.13□□□□□ -0.47
ABCD4-228ENST00000557588 FAM122CQ6P4D5 195 aa12.13□□□□□ -0.47
ABCD4-228ENST00000557588 NHLRC2Q8NBF2 726 aa12.13□□□□□ -0.47
ABCD4-228ENST00000557588 PKHD1L1Q86WI1 4243 aa12.13□□□□□ -0.47
ABCD4-228ENST00000557588 TRGV11A0A075B6L2 103 aa12.12□□□□□ -0.47
ABCD4-228ENST00000557588 TRAV8-6A0A0B4J262 113 aa12.12□□□□□ -0.47
ABCD4-228ENST00000557588 TM2D2Q9BX73 214 aa12.12□□□□□ -0.47
ABCD4-228ENST00000557588 GSKIPQ9P0R6 139 aa12.12□□□□□ -0.47
ABCD4-228ENST00000557588 GATA1P15976 413 aaPredicted RBP12.11□□□□□ -0.47
ABCD4-228ENST00000557588 TMEM183BQ1AE95 376 aa12.11□□□□□ -0.47
ABCD4-228ENST00000557588 Q6AWC8 147 aa12.11□□□□□ -0.47
ABCD4-228ENST00000557588 TMEM183AQ8IXX5 376 aa12.11□□□□□ -0.47
ABCD4-228ENST00000557588 OR4C5Q8NGB2 326 aa12.11□□□□□ -0.47
ABCD4-228ENST00000557588 CHAC2Q8WUX2 184 aa12.11□□□□□ -0.47
ABCD4-228ENST00000557588 C20orf85Q9H1P6 137 aa12.11□□□□□ -0.47
ABCD4-228ENST00000557588 FLVCR2Q9UPI3 526 aa12.11□□□□□ -0.47
ABCD4-228ENST00000557588 UBE2L5PA0A1B0GUS4 154 aa12.1□□□□□ -0.47
ABCD4-228ENST00000557588 L7N2F9 121 aa12.1□□□□□ -0.47
ABCD4-228ENST00000557588 CST7O76096 145 aa12.1□□□□□ -0.47
ABCD4-228ENST00000557588 VAMP2P63027 116 aa12.1□□□□□ -0.47
ABCD4-228ENST00000557588 TDRG1Q3Y452 100 aa12.1□□□□□ -0.47
ABCD4-228ENST00000557588 OR10J3Q5JRS4 329 aa12.1□□□□□ -0.47
ABCD4-228ENST00000557588 SLC25A2Q9BXI2 301 aa12.1□□□□□ -0.47
ABCD4-228ENST00000557588 IGHV3-30P01768 117 aa12.09□□□□□ -0.47
ABCD4-228ENST00000557588 IGHV3-33P01772 117 aa12.09□□□□□ -0.47
ABCD4-228ENST00000557588 IGHV3-30-3P0DP02 117 aa12.09□□□□□ -0.47
ABCD4-228ENST00000557588 IGHV3-30-5P0DP03 117 aa12.09□□□□□ -0.47
ABCD4-228ENST00000557588 CAV2P51636 162 aa12.09□□□□□ -0.47
ABCD4-228ENST00000557588 BAXQ07812 192 aa12.09□□□□□ -0.47
ABCD4-228ENST00000557588 BAK1Q16611 211 aa12.09□□□□□ -0.47
ABCD4-228ENST00000557588 MITD1Q8WV92 249 aa12.09□□□□□ -0.47
ABCD4-228ENST00000557588 GPN1Q9HCN4 374 aaPredicted RBP12.09□□□□□ -0.47
ABCD4-228ENST00000557588 RBAKDNA6NC62 111 aa12.08□□□□□ -0.48
ABCD4-228ENST00000557588 H3BMQ9 156 aa12.08□□□□□ -0.48
ABCD4-228ENST00000557588 M0R2P5 195 aa12.08□□□□□ -0.48
ABCD4-228ENST00000557588 PFN1P07737 140 aaKnown RBP12.08□□□□□ -0.48
ABCD4-228ENST00000557588 BCAP31P51572 246 aa12.08□□□□□ -0.48
ABCD4-228ENST00000557588 ASAH1Q13510 395 aa12.08□□□□□ -0.48
ABCD4-228ENST00000557588 LELP1Q5T871 98 aa12.08□□□□□ -0.48
ABCD4-228ENST00000557588 FAM159AQ6UWV7 190 aa12.08□□□□□ -0.48
ABCD4-228ENST00000557588 FAM167A-AS1Q96KT0 104 aa12.08□□□□□ -0.48
ABCD4-228ENST00000557588 CHAC1Q9BUX1 264 aa12.08□□□□□ -0.48
ABCD4-228ENST00000557588 C11orf1Q9H5F2 150 aa12.08□□□□□ -0.48
ABCD4-228ENST00000557588 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.07□□□□□ -0.48
ABCD4-228ENST00000557588 LECT2O14960 151 aa12.07□□□□□ -0.48
ABCD4-228ENST00000557588 GCSAMLQ5JQS6 135 aa12.07□□□□□ -0.48
ABCD4-228ENST00000557588 IGHV3-16A0A0C4DH30 117 aa12.06□□□□□ -0.48
ABCD4-228ENST00000557588 NAP1L6A6NFF2 107 aa12.06□□□□□ -0.48
ABCD4-228ENST00000557588 NBEAP1P0C6P0 100 aa12.06□□□□□ -0.48
ABCD4-228ENST00000557588 LINC01620Q4KN68 170 aa12.06□□□□□ -0.48
ABCD4-228ENST00000557588 LSM5Q9Y4Y9 91 aaKnown RBP12.06□□□□□ -0.48
ABCD4-228ENST00000557588 LENEPQ9Y5L5 61 aa12.06□□□□□ -0.48
ABCD4-228ENST00000557588 FAM24AA6NFZ4 105 aa12.05□□□□□ -0.48
ABCD4-228ENST00000557588 FGF7P21781 194 aa12.05□□□□□ -0.48
ABCD4-228ENST00000557588 S100A11P31949 105 aa12.05□□□□□ -0.48
ABCD4-228ENST00000557588 SULT1A1P50225 295 aa12.05□□□□□ -0.48
ABCD4-228ENST00000557588 SLC25A29Q8N8R3 303 aa12.05□□□□□ -0.48
ABCD4-228ENST00000557588 FXYD5Q96DB9 178 aa12.05□□□□□ -0.48
ABCD4-228ENST00000557588 PHYHIPLQ96FC7 376 aa12.05□□□□□ -0.48
ABCD4-228ENST00000557588 TRAV8-3A0A0A6YYJ7 113 aa12.04□□□□□ -0.48
ABCD4-228ENST00000557588 FBLL1A6NHQ2 334 aaKnown RBP12.04□□□□□ -0.48
ABCD4-228ENST00000557588 CCSO14618 274 aa12.04□□□□□ -0.48
ABCD4-228ENST00000557588 NOL3O60936 208 aaKnown RBP12.04□□□□□ -0.48
ABCD4-228ENST00000557588 RHOHQ15669 191 aa12.04□□□□□ -0.48
ABCD4-228ENST00000557588 MIR17HGQ75NE6 70 aa12.04□□□□□ -0.48
ABCD4-228ENST00000557588 CIRBP-AS1Q8TBR5 109 aa12.04□□□□□ -0.48
ABCD4-228ENST00000557588 OR51M1Q9H341 326 aa12.04□□□□□ -0.48
ABCD4-228ENST00000557588 LYRM2Q9NU23 88 aaPredicted RBP12.04□□□□□ -0.48
ABCD4-228ENST00000557588 NAGKQ9UJ70 344 aa12.04□□□□□ -0.48
ABCD4-228ENST00000557588 TRBV6-4A0A1B0GX49 114 aa12.03□□□□□ -0.48
ABCD4-228ENST00000557588 RS1O15537 224 aa12.03□□□□□ -0.48
ABCD4-228ENST00000557588 CSN1S1P47710 185 aa12.03□□□□□ -0.48
ABCD4-228ENST00000557588 Q8N3U1 123 aa12.03□□□□□ -0.48
ABCD4-228ENST00000557588 PRADC1Q9BSG0 188 aa12.03□□□□□ -0.48
ABCD4-228ENST00000557588 NPCDR1Q9BY65 106 aa12.03□□□□□ -0.48
ABCD4-228ENST00000557588 IGSF23A1L1A6 192 aa12.02□□□□□ -0.49
ABCD4-228ENST00000557588 IGLV2-8P01709 118 aa12.02□□□□□ -0.49
ABCD4-228ENST00000557588 OR10J4P0C629 311 aa12.02□□□□□ -0.49
ABCD4-228ENST00000557588 BTCP35070 178 aa12.02□□□□□ -0.49
ABCD4-228ENST00000557588 HBG1P69891 147 aa12.02□□□□□ -0.49
ABCD4-228ENST00000557588 HBG2P69892 147 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms