RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 OR7C2O60412 319 aa4.62□□□□□ -1.67
SLIRP-203ENST00000554074 LEPP41159 167 aa4.62□□□□□ -1.67
SLIRP-203ENST00000554074 PPT1P50897 306 aa4.62□□□□□ -1.67
SLIRP-203ENST00000554074 RAB2AP61019 212 aa4.62□□□□□ -1.67
SLIRP-203ENST00000554074 GCSAMLQ5JQS6 135 aa4.62□□□□□ -1.67
SLIRP-203ENST00000554074 GFI1BQ5VTD9 330 aa4.62□□□□□ -1.67
SLIRP-203ENST00000554074 MIR17HGQ75NE6 70 aa4.62□□□□□ -1.67
SLIRP-203ENST00000554074 RXFP4Q8TDU9 374 aa4.62□□□□□ -1.67
SLIRP-203ENST00000554074 RAB24Q969Q5 203 aa4.62□□□□□ -1.67
SLIRP-203ENST00000554074 C18orf15Q96N68 181 aa4.62□□□□□ -1.67
SLIRP-203ENST00000554074 PYGO2Q9BRQ0 406 aa4.62□□□□□ -1.67
SLIRP-203ENST00000554074 TCEAL7Q9BRU2 100 aa4.62□□□□□ -1.67
SLIRP-203ENST00000554074 SH3BGRL3Q9H299 93 aa4.62□□□□□ -1.67
SLIRP-203ENST00000554074 NOP10Q9NPE3 64 aaKnown RBP4.62□□□□□ -1.67
SLIRP-203ENST00000554074 ZNF586Q9NXT0 402 aa4.62□□□□□ -1.67
SLIRP-203ENST00000554074 TRAV1-1A0A0B4J248 108 aa4.61□□□□□ -1.67
SLIRP-203ENST00000554074 TRAV5A0A0B4J249 113 aa4.61□□□□□ -1.67
SLIRP-203ENST00000554074 TRBV7-9A0A0J9YWB2 115 aa4.61□□□□□ -1.67
SLIRP-203ENST00000554074 SERTM2A0A1B0GWG4 89 aa4.61□□□□□ -1.67
SLIRP-203ENST00000554074 RBAKDNA6NC62 111 aa4.61□□□□□ -1.67
SLIRP-203ENST00000554074 FBLL1A6NHQ2 334 aaKnown RBP4.61□□□□□ -1.67
SLIRP-203ENST00000554074 SNURFLB1AK76 121 aa4.61□□□□□ -1.67
SLIRP-203ENST00000554074 KLLNB2CW77 178 aa4.61□□□□□ -1.67
SLIRP-203ENST00000554074 PRAC2D3DTV9 90 aa4.61□□□□□ -1.67
SLIRP-203ENST00000554074 NUDT3O95989 172 aa4.61□□□□□ -1.67
SLIRP-203ENST00000554074 SLC25A5P05141 298 aaKnown RBP4.61□□□□□ -1.67
SLIRP-203ENST00000554074 NMBP08949 121 aa4.61□□□□□ -1.67
SLIRP-203ENST00000554074 CT45A10P0DMU9 189 aa4.61□□□□□ -1.67
SLIRP-203ENST00000554074 HTN1P15515 57 aa4.61□□□□□ -1.67
SLIRP-203ENST00000554074 BTF3P20290 206 aaKnown RBP4.61□□□□□ -1.67
SLIRP-203ENST00000554074 CSN1S1P47710 185 aa4.61□□□□□ -1.67
SLIRP-203ENST00000554074 SULT1A2P50226 295 aa4.61□□□□□ -1.67
SLIRP-203ENST00000554074 UBE2L3P68036 154 aaKnown RBP4.61□□□□□ -1.67
SLIRP-203ENST00000554074 DAZ2Q13117 558 aaKnown RBP4.61□□□□□ -1.67
SLIRP-203ENST00000554074 KIR3DS1Q14943 382 aa4.61□□□□□ -1.67
SLIRP-203ENST00000554074 FAM122CQ6P4D5 195 aa4.61□□□□□ -1.67
SLIRP-203ENST00000554074 C6orf223Q8N319 242 aa4.61□□□□□ -1.67
SLIRP-203ENST00000554074 MBD3L1Q8WWY6 194 aa4.61□□□□□ -1.67
SLIRP-203ENST00000554074 FXYD5Q96DB9 178 aa4.61□□□□□ -1.67
SLIRP-203ENST00000554074 FAM19A4Q96LR4 140 aa4.61□□□□□ -1.67
SLIRP-203ENST00000554074 LINC00477Q96M19 166 aa4.61□□□□□ -1.67
SLIRP-203ENST00000554074 LINC00467Q9BRT7 94 aa4.61□□□□□ -1.67
SLIRP-203ENST00000554074 UPK3BQ9BT76 320 aa4.61□□□□□ -1.67
SLIRP-203ENST00000554074 OTORQ9NRC9 128 aa4.61□□□□□ -1.67
SLIRP-203ENST00000554074 LINC00588Q9Y4M8 146 aa4.61□□□□□ -1.67
SLIRP-203ENST00000554074 A0A1W2PRE2 83 aa4.6□□□□□ -1.67
SLIRP-203ENST00000554074 H3BTX0 84 aa4.6□□□□□ -1.67
SLIRP-203ENST00000554074 NDUFB4O95168 129 aa4.6□□□□□ -1.67
SLIRP-203ENST00000554074 SNRPCP09234 159 aaKnown RBP4.6□□□□□ -1.67
SLIRP-203ENST00000554074 ARL14EPLP0DKL9 152 aa4.6□□□□□ -1.67
SLIRP-203ENST00000554074 PYYP10082 97 aa4.6□□□□□ -1.67
SLIRP-203ENST00000554074 CRISP2P16562 243 aa4.6□□□□□ -1.67
SLIRP-203ENST00000554074 GCHFRP30047 84 aa4.6□□□□□ -1.67
SLIRP-203ENST00000554074 TAGLN2P37802 199 aaKnown RBP4.6□□□□□ -1.67
SLIRP-203ENST00000554074 FHITP49789 147 aa4.6□□□□□ -1.67
SLIRP-203ENST00000554074 BLOC1S1P78537 153 aa4.6□□□□□ -1.67
SLIRP-203ENST00000554074 CD300CQ08708 224 aa4.6□□□□□ -1.67
SLIRP-203ENST00000554074 TTC32Q5I0X7 151 aa4.6□□□□□ -1.67
SLIRP-203ENST00000554074 ZNF680Q8NEM1 530 aa4.6□□□□□ -1.67
SLIRP-203ENST00000554074 TMED6Q8WW62 240 aa4.6□□□□□ -1.67
SLIRP-203ENST00000554074 TXNDC17Q9BRA2 123 aa4.6□□□□□ -1.67
SLIRP-203ENST00000554074 LENEPQ9Y5L5 61 aa4.6□□□□□ -1.67
SLIRP-203ENST00000554074 TRAV26-1A0A087WT03 109 aa4.59□□□□□ -1.67
SLIRP-203ENST00000554074 TRAV12-3A0A0B4J271 114 aa4.59□□□□□ -1.67
SLIRP-203ENST00000554074 A0A1W2PPQ1 181 aa4.59□□□□□ -1.67
SLIRP-203ENST00000554074 C7orf71A4D174 169 aa4.59□□□□□ -1.67
SLIRP-203ENST00000554074 MAP1LC3B2A6NCE7 125 aa4.59□□□□□ -1.67
SLIRP-203ENST00000554074 K7EQM0 130 aa4.59□□□□□ -1.67
SLIRP-203ENST00000554074 M0R3E3 92 aa4.59□□□□□ -1.67
SLIRP-203ENST00000554074 ZNF324O75467 553 aaPredicted RBP4.59□□□□□ -1.67
SLIRP-203ENST00000554074 H2AFB1P0C5Y9 115 aa4.59□□□□□ -1.67
SLIRP-203ENST00000554074 OR10J4P0C629 311 aa4.59□□□□□ -1.67
SLIRP-203ENST00000554074 HOXA5P20719 270 aa4.59□□□□□ -1.67
SLIRP-203ENST00000554074 OR5I1Q13606 314 aa4.59□□□□□ -1.67
SLIRP-203ENST00000554074 ANXA2RQ3ZCQ2 193 aa4.59□□□□□ -1.67
SLIRP-203ENST00000554074 IBA57Q5T440 356 aaKnown RBP4.59□□□□□ -1.67
SLIRP-203ENST00000554074 C9orf47Q6ZRZ4 202 aa4.59□□□□□ -1.67
SLIRP-203ENST00000554074 SSX7Q7RTT5 188 aa4.59□□□□□ -1.67
SLIRP-203ENST00000554074 C5orf17Q8NAS9 161 aa4.59□□□□□ -1.67
SLIRP-203ENST00000554074 C11orf72Q8NBR9 251 aa4.59□□□□□ -1.67
SLIRP-203ENST00000554074 CMTM2Q8TAZ6 248 aa4.59□□□□□ -1.67
SLIRP-203ENST00000554074 FAM213BQ8TBF2 198 aa4.59□□□□□ -1.67
SLIRP-203ENST00000554074 BLNKQ8WV28 456 aa4.59□□□□□ -1.67
SLIRP-203ENST00000554074 MAP1LC3BQ9GZQ8 125 aa4.59□□□□□ -1.67
SLIRP-203ENST00000554074 Q9H3A6 140 aa4.59□□□□□ -1.67
SLIRP-203ENST00000554074 Q9H8V8 135 aa4.59□□□□□ -1.67
SLIRP-203ENST00000554074 GAGE12BA1L429 117 aa4.58□□□□□ -1.68
SLIRP-203ENST00000554074 PGPA6NDG6 321 aa4.58□□□□□ -1.68
SLIRP-203ENST00000554074 F6UZH7 168 aa4.58□□□□□ -1.68
SLIRP-203ENST00000554074 NDUFS6O75380 124 aaKnown RBP4.58□□□□□ -1.68
SLIRP-203ENST00000554074 CDK2AP2O75956 126 aa4.58□□□□□ -1.68
SLIRP-203ENST00000554074 GAGE7O76087 117 aa4.58□□□□□ -1.68
SLIRP-203ENST00000554074 IFNA7P01567 189 aa4.58□□□□□ -1.68
SLIRP-203ENST00000554074 GAGE12FP0CL80 117 aa4.58□□□□□ -1.68
SLIRP-203ENST00000554074 GAGE12GP0CL81 117 aa4.58□□□□□ -1.68
SLIRP-203ENST00000554074 GAGE12IP0CL82 117 aa4.58□□□□□ -1.68
SLIRP-203ENST00000554074 PRB4P10163 310 aaPredicted RBP4.58□□□□□ -1.68
SLIRP-203ENST00000554074 TCL1AP56279 114 aa4.58□□□□□ -1.68
SLIRP-203ENST00000554074 RANP62826 216 aaKnown RBP4.58□□□□□ -1.68
SLIRP-203ENST00000554074 TNP2Q05952 138 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms