RNA–Protein interactions for RNA: ENST00000553656.5

TUBB3-202, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-202ENST00000553656 UBE2G1P62253 170 aa9.99□□□□□ -0.81
TUBB3-202ENST00000553656 CCL20P78556 96 aa9.99□□□□□ -0.81
TUBB3-202ENST00000553656 SAPCD1Q5SSQ6 148 aa9.99□□□□□ -0.81
TUBB3-202ENST00000553656 MUC7Q8TAX7 377 aa9.99□□□□□ -0.81
TUBB3-202ENST00000553656 TRAV34A0A0B4J273 112 aa9.98□□□□□ -0.81
TUBB3-202ENST00000553656 RGS13O14921 159 aa9.98□□□□□ -0.81
TUBB3-202ENST00000553656 TAGLN2P37802 199 aaKnown RBP9.98□□□□□ -0.81
TUBB3-202ENST00000553656 PRR9Q5T870 116 aa9.98□□□□□ -0.81
TUBB3-202ENST00000553656 C11orf45Q8TAV5 145 aa9.98□□□□□ -0.81
TUBB3-202ENST00000553656 C16orf74Q96GX8 76 aa9.98□□□□□ -0.81
TUBB3-202ENST00000553656 FMC1Q96HJ9 113 aa9.98□□□□□ -0.81
TUBB3-202ENST00000553656 TXNDC17Q9BRA2 123 aa9.98□□□□□ -0.81
TUBB3-202ENST00000553656 STAB2Q8WWQ8 2551 aa9.98□□□□□ -0.81
TUBB3-202ENST00000553656 TEX48A0A1B0GUV7 120 aa9.97□□□□□ -0.81
TUBB3-202ENST00000553656 CXorf65A6NEN9 183 aa9.97□□□□□ -0.81
TUBB3-202ENST00000553656 TEX261Q6UWH6 196 aa9.97□□□□□ -0.81
TUBB3-202ENST00000553656 ZNF493Q6ZR52 646 aa9.97□□□□□ -0.81
TUBB3-202ENST00000553656 TMEM263Q8WUH6 116 aaKnown RBP9.97□□□□□ -0.81
TUBB3-202ENST00000553656 LINC00479Q96M42 142 aa9.97□□□□□ -0.81
TUBB3-202ENST00000553656 TRAV21A0A0B4J279 112 aa9.96□□□□□ -0.82
TUBB3-202ENST00000553656 SCO2A0A1W2PP80 73 aa9.96□□□□□ -0.82
TUBB3-202ENST00000553656 CBY3A6NI87 242 aa9.96□□□□□ -0.82
TUBB3-202ENST00000553656 ZNF324O75467 553 aaPredicted RBP9.96□□□□□ -0.82
TUBB3-202ENST00000553656 IGLV2-11P01706 119 aa9.96□□□□□ -0.82
TUBB3-202ENST00000553656 S100A9P06702 114 aaKnown RBP9.96□□□□□ -0.82
TUBB3-202ENST00000553656 SPART-AS1P0CW21 52 aa9.96□□□□□ -0.82
TUBB3-202ENST00000553656 BCL2P10415 239 aa9.96□□□□□ -0.82
TUBB3-202ENST00000553656 PMS2P11Q13670 270 aa9.96□□□□□ -0.82
TUBB3-202ENST00000553656 SMUG1Q53HV7 270 aa9.96□□□□□ -0.82
TUBB3-202ENST00000553656 Q86TA4 180 aa9.96□□□□□ -0.82
TUBB3-202ENST00000553656 VAX2Q9UIW0 290 aa9.96□□□□□ -0.82
TUBB3-202ENST00000553656 NAGKQ9UJ70 344 aa9.96□□□□□ -0.82
TUBB3-202ENST00000553656 C3orf84H3BNL1 204 aa9.95□□□□□ -0.82
TUBB3-202ENST00000553656 PDE6DO43924 150 aa9.95□□□□□ -0.82
TUBB3-202ENST00000553656 PRM2P04554 102 aa9.95□□□□□ -0.82
TUBB3-202ENST00000553656 MEF2BQ02080 365 aaPredicted RBP9.95□□□□□ -0.82
TUBB3-202ENST00000553656 TMEM183BQ1AE95 376 aa9.95□□□□□ -0.82
TUBB3-202ENST00000553656 Q6AWC8 147 aa9.95□□□□□ -0.82
TUBB3-202ENST00000553656 FAM159AQ6UWV7 190 aa9.95□□□□□ -0.82
TUBB3-202ENST00000553656 EIF4E3Q8N5X7 224 aaKnown RBP9.95□□□□□ -0.82
TUBB3-202ENST00000553656 ZNF680Q8NEM1 530 aa9.95□□□□□ -0.82
TUBB3-202ENST00000553656 TVP23CQ96ET8 276 aa9.95□□□□□ -0.82
TUBB3-202ENST00000553656 C8orf49Q96NF6 230 aa9.95□□□□□ -0.82
TUBB3-202ENST00000553656 ZFP30Q9Y2G7 519 aa9.95□□□□□ -0.82
TUBB3-202ENST00000553656 IGHV1OR15-1A0A075B7D0 117 aa9.94□□□□□ -0.82
TUBB3-202ENST00000553656 SNURFLB1AK76 121 aa9.94□□□□□ -0.82
TUBB3-202ENST00000553656 GCGP01275 180 aa9.94□□□□□ -0.82
TUBB3-202ENST00000553656 AZU1P20160 251 aa9.94□□□□□ -0.82
TUBB3-202ENST00000553656 MUC21Q5SSG8 566 aa9.94□□□□□ -0.82
TUBB3-202ENST00000553656 FAM222AQ5U5X8 452 aa9.94□□□□□ -0.82
TUBB3-202ENST00000553656 RNASE8Q8TDE3 154 aaKnown RBP9.94□□□□□ -0.82
TUBB3-202ENST00000553656 LINC00467Q9BRT7 94 aa9.94□□□□□ -0.82
TUBB3-202ENST00000553656 KLF12Q9Y4X4 402 aa9.94□□□□□ -0.82
TUBB3-202ENST00000553656 TRBV6-1A0A0K0K1D8 114 aa9.93□□□□□ -0.82
TUBB3-202ENST00000553656 NANOS2P60321 138 aaKnown RBP9.93□□□□□ -0.82
TUBB3-202ENST00000553656 ZFAND6Q6FIF0 208 aa9.93□□□□□ -0.82
TUBB3-202ENST00000553656 LYPD6BQ8NI32 183 aa9.93□□□□□ -0.82
TUBB3-202ENST00000553656 C2CD4CQ8TF44 421 aa9.93□□□□□ -0.82
TUBB3-202ENST00000553656 C11orf52Q96A22 123 aa9.93□□□□□ -0.82
TUBB3-202ENST00000553656 DKK2Q9UBU2 259 aa9.93□□□□□ -0.82
TUBB3-202ENST00000553656 CELA1Q9UNI1 258 aa9.93□□□□□ -0.82
TUBB3-202ENST00000553656 TIMM8BQ9Y5J9 83 aaPredicted RBP9.93□□□□□ -0.82
TUBB3-202ENST00000553656 TRGV11A0A075B6L2 103 aa9.92□□□□□ -0.82
TUBB3-202ENST00000553656 LYRM9A8MSI8 78 aa9.92□□□□□ -0.82
TUBB3-202ENST00000553656 PFN1P07737 140 aaKnown RBP9.92□□□□□ -0.82
TUBB3-202ENST00000553656 ANXA2RQ3ZCQ2 193 aa9.92□□□□□ -0.82
TUBB3-202ENST00000553656 NUPR2A6NF83 97 aa9.91□□□□□ -0.82
TUBB3-202ENST00000553656 RBFOX3A6NFN3 312 aa9.91□□□□□ -0.82
TUBB3-202ENST00000553656 LTAP01374 205 aa9.91□□□□□ -0.82
TUBB3-202ENST00000553656 RPL35P42766 123 aaKnown RBP9.91□□□□□ -0.82
TUBB3-202ENST00000553656 DAD1P61803 113 aa9.91□□□□□ -0.82
TUBB3-202ENST00000553656 ZNF415Q09FC8 603 aa9.91□□□□□ -0.82
TUBB3-202ENST00000553656 Q6ZQT7 251 aa9.91□□□□□ -0.82
TUBB3-202ENST00000553656 BAGE2Q86Y30 109 aa9.91□□□□□ -0.82
TUBB3-202ENST00000553656 KCNS1Q96KK3 526 aa9.91□□□□□ -0.82
TUBB3-202ENST00000553656 EIF5A2Q9GZV4 153 aaKnown RBP9.91□□□□□ -0.82
TUBB3-202ENST00000553656 SDF2L1Q9HCN8 221 aa9.91□□□□□ -0.82
TUBB3-202ENST00000553656 NOP10Q9NPE3 64 aaKnown RBP9.91□□□□□ -0.82
TUBB3-202ENST00000553656 MED9Q9NWA0 146 aa9.91□□□□□ -0.82
TUBB3-202ENST00000553656 PLAC8L1A1L4L8 177 aa9.9□□□□□ -0.82
TUBB3-202ENST00000553656 FABP5P3A8MUU1 101 aa9.9□□□□□ -0.82
TUBB3-202ENST00000553656 ZNF80P51504 273 aaPredicted RBP9.9□□□□□ -0.82
TUBB3-202ENST00000553656 RAB14P61106 215 aa9.9□□□□□ -0.82
TUBB3-202ENST00000553656 TOR2AQ5JU69 321 aa9.9□□□□□ -0.82
TUBB3-202ENST00000553656 IBA57Q5T440 356 aaKnown RBP9.9□□□□□ -0.82
TUBB3-202ENST00000553656 ZNF767PQ75MW2 155 aa9.9□□□□□ -0.82
TUBB3-202ENST00000553656 TMEM183AQ8IXX5 376 aa9.9□□□□□ -0.82
TUBB3-202ENST00000553656 PHLDA1Q8WV24 401 aaPredicted RBP9.9□□□□□ -0.82
TUBB3-202ENST00000553656 GSN-AS1Q9NRJ2 163 aa9.9□□□□□ -0.82
TUBB3-202ENST00000553656 DEFB130BP0DP73 79 aa9.89□□□□□ -0.83
TUBB3-202ENST00000553656 DEFB130AP0DP74 79 aa9.89□□□□□ -0.83
TUBB3-202ENST00000553656 TCL1AP56279 114 aa9.89□□□□□ -0.83
TUBB3-202ENST00000553656 C12orf74Q32Q52 190 aa9.89□□□□□ -0.83
TUBB3-202ENST00000553656 TDRG1Q3Y452 100 aa9.89□□□□□ -0.83
TUBB3-202ENST00000553656 ZNF506Q5JVG8 444 aa9.89□□□□□ -0.83
TUBB3-202ENST00000553656 FAM162BQ5T6X4 162 aa9.89□□□□□ -0.83
TUBB3-202ENST00000553656 Q6ZTC4 211 aa9.89□□□□□ -0.83
TUBB3-202ENST00000553656 NHLRC2Q8NBF2 726 aa9.89□□□□□ -0.83
TUBB3-202ENST00000553656 PCNPQ8WW12 178 aaKnown RBP9.89□□□□□ -0.83
TUBB3-202ENST00000553656 ZC2HC1AQ96GY0 325 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms