RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 AMTNQ6UX39 209 aa8.37□□□□□ -1.07
CKAP4-202ENST00000552828 ZNF575Q86XF7 245 aa8.37□□□□□ -1.07
CKAP4-202ENST00000552828 LYPD1Q8N2G4 141 aa8.37□□□□□ -1.07
CKAP4-202ENST00000552828 EXOC3-AS1Q8N2X6 119 aa8.37□□□□□ -1.07
CKAP4-202ENST00000552828 RAB24Q969Q5 203 aa8.37□□□□□ -1.07
CKAP4-202ENST00000552828 GOLT1BQ9Y3E0 138 aa8.37□□□□□ -1.07
CKAP4-202ENST00000552828 YTHDF2Q9Y5A9 579 aaKnown RBP8.37□□□□□ -1.07
CKAP4-202ENST00000552828 DNAH5Q8TE73 4624 aa8.36□□□□□ -1.07
CKAP4-202ENST00000552828 LOC102723971A0A1B0GUV8 181 aa8.36□□□□□ -1.07
CKAP4-202ENST00000552828 M0R3E3 92 aa8.36□□□□□ -1.07
CKAP4-202ENST00000552828 HBE1P02100 147 aa8.36□□□□□ -1.07
CKAP4-202ENST00000552828 STAG3L2P0CL84 134 aa8.36□□□□□ -1.07
CKAP4-202ENST00000552828 STAG3L3P0CL85 134 aa8.36□□□□□ -1.07
CKAP4-202ENST00000552828 PRB4P10163 310 aaPredicted RBP8.36□□□□□ -1.07
CKAP4-202ENST00000552828 SPINK13Q1W4C9 94 aa8.36□□□□□ -1.07
CKAP4-202ENST00000552828 AKR1C8PQ5T2L2 129 aa8.36□□□□□ -1.07
CKAP4-202ENST00000552828 TMEM88Q6PEY1 159 aa8.36□□□□□ -1.07
CKAP4-202ENST00000552828 F8W036 122 aa8.35□□□□□ -1.07
CKAP4-202ENST00000552828 M0R2Z0 102 aa8.35□□□□□ -1.07
CKAP4-202ENST00000552828 ARL14EPLP0DKL9 152 aa8.35□□□□□ -1.07
CKAP4-202ENST00000552828 ADCYAP1P18509 176 aa8.35□□□□□ -1.07
CKAP4-202ENST00000552828 TSPOP30536 169 aa8.35□□□□□ -1.07
CKAP4-202ENST00000552828 CSN1S1P47710 185 aa8.35□□□□□ -1.07
CKAP4-202ENST00000552828 FLI1Q01543 452 aaPredicted RBP8.35□□□□□ -1.07
CKAP4-202ENST00000552828 RRN3P1Q2M238 152 aa8.35□□□□□ -1.07
CKAP4-202ENST00000552828 IGF2BP2-AS1Q96M15 143 aa8.35□□□□□ -1.07
CKAP4-202ENST00000552828 Q9H3A6 140 aa8.35□□□□□ -1.07
CKAP4-202ENST00000552828 TREM1Q9NP99 234 aa8.35□□□□□ -1.07
CKAP4-202ENST00000552828 APOBP04114 4563 aaKnown RBP8.35□□□□□ -1.07
CKAP4-202ENST00000552828 CTXND1A0A1B0GTU2 59 aa8.34□□□□□ -1.07
CKAP4-202ENST00000552828 FAM74A7A6NL05 159 aa8.34□□□□□ -1.07
CKAP4-202ENST00000552828 NPIPB6E9PJ23 425 aa8.34□□□□□ -1.07
CKAP4-202ENST00000552828 CXorf1O96002 111 aa8.34□□□□□ -1.07
CKAP4-202ENST00000552828 INSP01308 110 aa8.34□□□□□ -1.07
CKAP4-202ENST00000552828 HTN3P15516 51 aa8.34□□□□□ -1.07
CKAP4-202ENST00000552828 CDKN1BP46527 198 aa8.34□□□□□ -1.07
CKAP4-202ENST00000552828 DAD1P61803 113 aa8.34□□□□□ -1.07
CKAP4-202ENST00000552828 FAM74A3Q4VXF1 159 aa8.34□□□□□ -1.07
CKAP4-202ENST00000552828 C15orf53Q8NAA6 179 aa8.34□□□□□ -1.07
CKAP4-202ENST00000552828 RXFP4Q8TDU9 374 aa8.34□□□□□ -1.07
CKAP4-202ENST00000552828 LINC00477Q96M19 166 aa8.34□□□□□ -1.07
CKAP4-202ENST00000552828 TMEM208Q9BTX3 173 aa8.34□□□□□ -1.07
CKAP4-202ENST00000552828 OTORQ9NRC9 128 aa8.34□□□□□ -1.07
CKAP4-202ENST00000552828 TMEM167BQ9NRX6 74 aa8.34□□□□□ -1.07
CKAP4-202ENST00000552828 TRAV12-2A0A075B6T6 113 aa8.33□□□□□ -1.08
CKAP4-202ENST00000552828 PGPA6NDG6 321 aa8.33□□□□□ -1.08
CKAP4-202ENST00000552828 CRXO43186 299 aaPredicted RBP8.33□□□□□ -1.08
CKAP4-202ENST00000552828 CDK2AP2O75956 126 aa8.33□□□□□ -1.08
CKAP4-202ENST00000552828 CT45A10P0DMU9 189 aa8.33□□□□□ -1.08
CKAP4-202ENST00000552828 GCHFRP30047 84 aa8.33□□□□□ -1.08
CKAP4-202ENST00000552828 CMTM2Q8TAZ6 248 aa8.33□□□□□ -1.08
CKAP4-202ENST00000552828 ODF3Q96PU9 254 aa8.33□□□□□ -1.08
CKAP4-202ENST00000552828 SMDT1Q9H4I9 107 aa8.33□□□□□ -1.08
CKAP4-202ENST00000552828 LYRM9A8MSI8 78 aa8.32□□□□□ -1.08
CKAP4-202ENST00000552828 UMAD1C9J7I0 102 aa8.32□□□□□ -1.08
CKAP4-202ENST00000552828 LEPP41159 167 aa8.32□□□□□ -1.08
CKAP4-202ENST00000552828 SRSF3P84103 164 aaKnown RBP8.32□□□□□ -1.08
CKAP4-202ENST00000552828 ERCC8Q13216 396 aa8.32□□□□□ -1.08
CKAP4-202ENST00000552828 PEA15Q15121 130 aa8.32□□□□□ -1.08
CKAP4-202ENST00000552828 ZNF726P1Q15940 193 aa8.32□□□□□ -1.08
CKAP4-202ENST00000552828 TMEM78Q5T7P6 136 aa8.32□□□□□ -1.08
CKAP4-202ENST00000552828 C9orf47Q6ZRZ4 202 aa8.32□□□□□ -1.08
CKAP4-202ENST00000552828 SSX7Q7RTT5 188 aa8.32□□□□□ -1.08
CKAP4-202ENST00000552828 IQCF2Q8IXL9 164 aa8.32□□□□□ -1.08
CKAP4-202ENST00000552828 AGPAT4-IT1Q9H0P7 198 aa8.32□□□□□ -1.08
CKAP4-202ENST00000552828 IGKV2-40A0A087WW87 121 aaPredicted RBP8.31□□□□□ -1.08
CKAP4-202ENST00000552828 NBDYA0A0U1RRE5 68 aa8.31□□□□□ -1.08
CKAP4-202ENST00000552828 RBAKDNA6NC62 111 aa8.31□□□□□ -1.08
CKAP4-202ENST00000552828 DIRC3C9JPN6 131 aa8.31□□□□□ -1.08
CKAP4-202ENST00000552828 IGKV2D-40P01614 121 aaPredicted RBP8.31□□□□□ -1.08
CKAP4-202ENST00000552828 SLC25A5P05141 298 aaKnown RBP8.31□□□□□ -1.08
CKAP4-202ENST00000552828 TNP2Q05952 138 aa8.31□□□□□ -1.08
CKAP4-202ENST00000552828 TMEM256Q8N2U0 113 aa8.31□□□□□ -1.08
CKAP4-202ENST00000552828 ARL6IP6Q8N6S5 226 aa8.31□□□□□ -1.08
CKAP4-202ENST00000552828 ZNRF2Q8NHG8 242 aa8.31□□□□□ -1.08
CKAP4-202ENST00000552828 LINC01587Q99440 93 aa8.31□□□□□ -1.08
CKAP4-202ENST00000552828 VGLL1Q99990 258 aa8.31□□□□□ -1.08
CKAP4-202ENST00000552828 NACAE9PAV3 2078 aa8.31□□□□□ -1.08
CKAP4-202ENST00000552828 PLAC8L1A1L4L8 177 aa8.3□□□□□ -1.08
CKAP4-202ENST00000552828 MAP1LC3B2A6NCE7 125 aa8.3□□□□□ -1.08
CKAP4-202ENST00000552828 C16orf90A8MZG2 172 aa8.3□□□□□ -1.08
CKAP4-202ENST00000552828 SFTA3P0C7M3 94 aa8.3□□□□□ -1.08
CKAP4-202ENST00000552828 DPPA3Q6W0C5 159 aa8.3□□□□□ -1.08
CKAP4-202ENST00000552828 C20orf144Q9BQM9 153 aa8.3□□□□□ -1.08
CKAP4-202ENST00000552828 ATG101Q9BSB4 218 aa8.3□□□□□ -1.08
CKAP4-202ENST00000552828 MAP1LC3BQ9GZQ8 125 aa8.3□□□□□ -1.08
CKAP4-202ENST00000552828 ZNF492Q9P255 531 aa8.3□□□□□ -1.08
CKAP4-202ENST00000552828 A0A1W2PRE2 83 aa8.29□□□□□ -1.08
CKAP4-202ENST00000552828 ZNF705GA8MUZ8 300 aaPredicted RBP8.29□□□□□ -1.08
CKAP4-202ENST00000552828 H7BYZ3 331 aa8.29□□□□□ -1.08
CKAP4-202ENST00000552828 J3KRW8 73 aa8.29□□□□□ -1.08
CKAP4-202ENST00000552828 PRM2P04554 102 aa8.29□□□□□ -1.08
CKAP4-202ENST00000552828 FHITP49789 147 aa8.29□□□□□ -1.08
CKAP4-202ENST00000552828 ZNF138P52744 262 aa8.29□□□□□ -1.08
CKAP4-202ENST00000552828 FGF8P55075 233 aaPredicted RBP8.29□□□□□ -1.08
CKAP4-202ENST00000552828 TAS2R60P59551 318 aa8.29□□□□□ -1.08
CKAP4-202ENST00000552828 KIR3DS1Q14943 382 aa8.29□□□□□ -1.08
CKAP4-202ENST00000552828 GFI1BQ5VTD9 330 aa8.29□□□□□ -1.08
CKAP4-202ENST00000552828 C6orf223Q8N319 242 aa8.29□□□□□ -1.08
CKAP4-202ENST00000552828 FAM213BQ8TBF2 198 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms