RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 FAM24BQ8N5W8 94 aa4.22□□□□□ -1.73
SCAF11-213ENST00000550629 RNF182Q8N6D2 247 aa4.22□□□□□ -1.73
SCAF11-213ENST00000550629 ZNF738Q8NE65 137 aa4.22□□□□□ -1.73
SCAF11-213ENST00000550629 OR10J6PQ8NGY7 276 aa4.22□□□□□ -1.73
SCAF11-213ENST00000550629 CMTM2Q8TAZ6 248 aa4.22□□□□□ -1.73
SCAF11-213ENST00000550629 RPUSD4Q96CM3 377 aaKnown RBP4.22□□□□□ -1.73
SCAF11-213ENST00000550629 LINC00052Q96N35 136 aa4.22□□□□□ -1.73
SCAF11-213ENST00000550629 Q9H3A6 140 aa4.22□□□□□ -1.73
SCAF11-213ENST00000550629 SAV1Q9H4B6 383 aaPredicted RBP4.22□□□□□ -1.73
SCAF11-213ENST00000550629 YTHDF2Q9Y5A9 579 aaKnown RBP4.22□□□□□ -1.73
SCAF11-213ENST00000550629 HLA-DRB4X5D2U9 266 aa4.22□□□□□ -1.73
SCAF11-213ENST00000550629 KIR2DL5BA0A0G2JN68 375 aa4.21□□□□□ -1.74
SCAF11-213ENST00000550629 KIR2DL5BA0A0G2JPC4 375 aa4.21□□□□□ -1.74
SCAF11-213ENST00000550629 PGPA6NDG6 321 aa4.21□□□□□ -1.74
SCAF11-213ENST00000550629 F6UZH7 168 aa4.21□□□□□ -1.74
SCAF11-213ENST00000550629 H3BMM0 161 aa4.21□□□□□ -1.74
SCAF11-213ENST00000550629 K7EQM0 130 aa4.21□□□□□ -1.74
SCAF11-213ENST00000550629 PDE6DO43924 150 aa4.21□□□□□ -1.74
SCAF11-213ENST00000550629 PAGE4O60829 102 aa4.21□□□□□ -1.74
SCAF11-213ENST00000550629 EIF3GO75821 320 aaKnown RBP eCLIP4.21□□□□□ -1.74
SCAF11-213ENST00000550629 AMBPP02760 352 aa4.21□□□□□ -1.74
SCAF11-213ENST00000550629 SNRPCP09234 159 aaKnown RBP4.21□□□□□ -1.74
SCAF11-213ENST00000550629 BCL2P10415 239 aa4.21□□□□□ -1.74
SCAF11-213ENST00000550629 NUTF2P61970 127 aaKnown RBP4.21□□□□□ -1.74
SCAF11-213ENST00000550629 CCL20P78556 96 aa4.21□□□□□ -1.74
SCAF11-213ENST00000550629 IFITM2Q01629 132 aa4.21□□□□□ -1.74
SCAF11-213ENST00000550629 MEF2BQ02080 365 aaPredicted RBP4.21□□□□□ -1.74
SCAF11-213ENST00000550629 ACTL10Q5JWF8 245 aa4.21□□□□□ -1.74
SCAF11-213ENST00000550629 CLLU1Q5K131 121 aa4.21□□□□□ -1.74
SCAF11-213ENST00000550629 MORN3Q6PF18 240 aaPredicted RBP4.21□□□□□ -1.74
SCAF11-213ENST00000550629 TRPT1Q86TN4 253 aaKnown RBP4.21□□□□□ -1.74
SCAF11-213ENST00000550629 KIR2DL5AQ8N109 375 aa4.21□□□□□ -1.74
SCAF11-213ENST00000550629 EXOC3-AS1Q8N2X6 119 aa4.21□□□□□ -1.74
SCAF11-213ENST00000550629 OR8A1Q8NGG7 326 aa4.21□□□□□ -1.74
SCAF11-213ENST00000550629 KIR2DL5BQ8NHK3 375 aa4.21□□□□□ -1.74
SCAF11-213ENST00000550629 HIST1H2BAQ96A08 127 aa4.21□□□□□ -1.74
SCAF11-213ENST00000550629 LINC00477Q96M19 166 aa4.21□□□□□ -1.74
SCAF11-213ENST00000550629 ODF3Q96PU9 254 aa4.21□□□□□ -1.74
SCAF11-213ENST00000550629 ATG101Q9BSB4 218 aa4.21□□□□□ -1.74
SCAF11-213ENST00000550629 SMDT1Q9H4I9 107 aa4.21□□□□□ -1.74
SCAF11-213ENST00000550629 PPP1R14DQ9NXH3 145 aa4.21□□□□□ -1.74
SCAF11-213ENST00000550629 GNG13Q9P2W3 67 aa4.21□□□□□ -1.74
SCAF11-213ENST00000550629 VAX2Q9UIW0 290 aa4.21□□□□□ -1.74
SCAF11-213ENST00000550629 EPDR1Q9UM22 224 aa4.21□□□□□ -1.74
SCAF11-213ENST00000550629 LENEPQ9Y5L5 61 aa4.21□□□□□ -1.74
SCAF11-213ENST00000550629 A0A1B0GV50 99 aa4.2□□□□□ -1.74
SCAF11-213ENST00000550629 RBFOX3A6NFN3 312 aa4.2□□□□□ -1.74
SCAF11-213ENST00000550629 C11orf94C9JXX5 98 aa4.2□□□□□ -1.74
SCAF11-213ENST00000550629 K7EIL1 84 aa4.2□□□□□ -1.74
SCAF11-213ENST00000550629 M0R3E3 92 aa4.2□□□□□ -1.74
SCAF11-213ENST00000550629 UBE2CO00762 179 aa4.2□□□□□ -1.74
SCAF11-213ENST00000550629 TCRAP04437 139 aa4.2□□□□□ -1.74
SCAF11-213ENST00000550629 S100A9P06702 114 aaKnown RBP4.2□□□□□ -1.74
SCAF11-213ENST00000550629 IGHV4-30-4P0DP06 118 aa4.2□□□□□ -1.74
SCAF11-213ENST00000550629 TSPOP30536 169 aa4.2□□□□□ -1.74
SCAF11-213ENST00000550629 APOC4P55056 127 aa4.2□□□□□ -1.74
SCAF11-213ENST00000550629 UBE2G2P60604 165 aa4.2□□□□□ -1.74
SCAF11-213ENST00000550629 ZNF506Q5JVG8 444 aa4.2□□□□□ -1.74
SCAF11-213ENST00000550629 TMEM78Q5T7P6 136 aa4.2□□□□□ -1.74
SCAF11-213ENST00000550629 CST9LP1Q5W188 147 aa4.2□□□□□ -1.74
SCAF11-213ENST00000550629 LINC00322Q6ZN03 302 aaPredicted RBP4.2□□□□□ -1.74
SCAF11-213ENST00000550629 APRG1Q8IVJ8 170 aa4.2□□□□□ -1.74
SCAF11-213ENST00000550629 STHQ8IWL8 128 aa4.2□□□□□ -1.74
SCAF11-213ENST00000550629 DEFB125Q8N687 156 aa4.2□□□□□ -1.74
SCAF11-213ENST00000550629 CYB561D1Q8N8Q1 229 aa4.2□□□□□ -1.74
SCAF11-213ENST00000550629 C11orf52Q96A22 123 aa4.2□□□□□ -1.74
SCAF11-213ENST00000550629 TUBA4BQ9H853 241 aa4.2□□□□□ -1.74
SCAF11-213ENST00000550629 SRD5A3Q9H8P0 318 aa4.2□□□□□ -1.74
SCAF11-213ENST00000550629 KLF12Q9Y4X4 402 aa4.2□□□□□ -1.74
SCAF11-213ENST00000550629 LOC102724200A0A096LPH7 203 aaPredicted RBP4.19□□□□□ -1.74
SCAF11-213ENST00000550629 TRBV6-1A0A0K0K1D8 114 aa4.19□□□□□ -1.74
SCAF11-213ENST00000550629 KNCNA6PVL3 124 aa4.19□□□□□ -1.74
SCAF11-213ENST00000550629 ZNF705FA8MVS1 300 aaPredicted RBP4.19□□□□□ -1.74
SCAF11-213ENST00000550629 PRAC2D3DTV9 90 aa4.19□□□□□ -1.74
SCAF11-213ENST00000550629 TMEM250H0YL14 139 aa4.19□□□□□ -1.74
SCAF11-213ENST00000550629 PEX7O00628 323 aa4.19□□□□□ -1.74
SCAF11-213ENST00000550629 CRISP2P16562 243 aa4.19□□□□□ -1.74
SCAF11-213ENST00000550629 HLA-DMBP28068 263 aa4.19□□□□□ -1.74
SCAF11-213ENST00000550629 LEPP41159 167 aa4.19□□□□□ -1.74
SCAF11-213ENST00000550629 CNN1P51911 297 aaKnown RBP4.19□□□□□ -1.74
SCAF11-213ENST00000550629 ZNF138P52744 262 aa4.19□□□□□ -1.74
SCAF11-213ENST00000550629 HIST1H1AQ02539 215 aaPredicted RBP4.19□□□□□ -1.74
SCAF11-213ENST00000550629 HAGHQ16775 308 aa4.19□□□□□ -1.74
SCAF11-213ENST00000550629 SAPCD1Q5SSQ6 148 aa4.19□□□□□ -1.74
SCAF11-213ENST00000550629 AMTNQ6UX39 209 aa4.19□□□□□ -1.74
SCAF11-213ENST00000550629 GOLT1AQ6ZVE7 132 aa4.19□□□□□ -1.74
SCAF11-213ENST00000550629 TMEM75Q8N9X5 138 aa4.19□□□□□ -1.74
SCAF11-213ENST00000550629 RNF183Q96D59 192 aa4.19□□□□□ -1.74
SCAF11-213ENST00000550629 FMC1Q96HJ9 113 aa4.19□□□□□ -1.74
SCAF11-213ENST00000550629 FAM19A4Q96LR4 140 aa4.19□□□□□ -1.74
SCAF11-213ENST00000550629 FAM210AQ96ND0 272 aa4.19□□□□□ -1.74
SCAF11-213ENST00000550629 MED9Q9NWA0 146 aa4.19□□□□□ -1.74
SCAF11-213ENST00000550629 MDFICQ9P1T7 246 aa4.19□□□□□ -1.74
SCAF11-213ENST00000550629 IGKV2-40A0A087WW87 121 aaPredicted RBP4.18□□□□□ -1.74
SCAF11-213ENST00000550629 A0A087WYN8 130 aa4.18□□□□□ -1.74
SCAF11-213ENST00000550629 RAB19A4D1S5 217 aa4.18□□□□□ -1.74
SCAF11-213ENST00000550629 RBMY1BA6NDE4 496 aaKnown RBP4.18□□□□□ -1.74
SCAF11-213ENST00000550629 RBMY1EA6NEQ0 496 aaKnown RBP4.18□□□□□ -1.74
SCAF11-213ENST00000550629 F6UB75 175 aa4.18□□□□□ -1.74
SCAF11-213ENST00000550629 IGKV2D-40P01614 121 aaPredicted RBP4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms